Protein

View in Explore
Genbank accession
ALM64024.1 [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,69
Protein sequence
MTIKYFTFFSPNNTEFPVGSNNDAKLYMMLTGMDYGTIRRKDWSAPVNTALNVQYTNTSIIAGGRYFELVGETIPLKANSVNYIHANIDLTQTTSPVKLSAETLNNSNRTDINNSSGVLKVLIDIRTTNGLGVISSEIPKQITTLDELATKTANIEDLTVKGDIKGWTSVSMQNVASATLQYKKINGAICLRGSGNWGAFKANSTKVVGSLPPEVRPTDNTQFEMTTQRANNNNKPMELQIDTNGTINVWSYSAGSGNYGGVVGTYFQ
Physico‐chemical
properties
protein length:268 AA
molecular weight: 29219,50160 Da
isoelectric point:8,51152
aromaticity:0,08209
hydropathy:-0,32687

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10
G3DSA:2.60.520.10
STR
1–135
G3DSA:2.60.520.10 DC_0707
IPR048780
RBD
2–137
IPR048780
SSF141658
STR
2–139
SSF141658
ALM64024.1
1 268
Architecture
STR
RBD
STR 1-139 | RBD 140-268
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 936 group phage Phi109
[NCBI] 		1636556 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALM64024.1 [NCBI]
Genbank nucleotide accession
KP793121 [NCBI]
CDS location
range 16796 -> 17602
strand +
CDS
ATGACAATTAAATACTTTACATTCTTTAGTCCAAACAATACAGAGTTTCCAGTCGGTTCTAATAATGACGCAAAGTTATATATGATGTTGACTGGAATGGACTATGGAACAATCAGGCGCAAAGATTGGTCAGCGCCAGTAAACACAGCCCTAAATGTACAATATACCAATACTTCAATTATTGCTGGAGGTAGATATTTTGAACTAGTGGGTGAGACGATACCTCTAAAGGCTAATTCTGTCAATTATATCCATGCAAATATTGACTTAACTCAAACTACTAGTCCTGTAAAGTTATCAGCTGAAACCTTAAACAATAGCAACAGAACCGATATAAATAATAGTTCTGGTGTCCTAAAGGTTTTGATTGATATCAGAACGACTAATGGTTTAGGGGTAATCAGTTCTGAAATACCAAAACAAATAACTACATTGGACGAATTAGCAACAAAGACAGCTAATATTGAAGACTTGACAGTCAAAGGAGATATCAAGGGCTGGACTAGCGTTTCAATGCAAAACGTAGCTAGTGCAACTCTTCAATATAAAAAAATTAACGGTGCCATTTGTTTACGTGGTTCAGGAAACTGGGGTGCCTTTAAAGCAAATTCTACAAAAGTTGTCGGAAGTTTGCCACCAGAAGTAAGACCAACTGATAACACTCAATTTGAAATGACAACACAACGTGCAAATAACAACAATAAACCAATGGAACTACAAATAGATACTAACGGTACGATAAACGTATGGAGTTACTCTGCTGGTTCAGGTAACTATGGCGGTGTCGTAGGGACATATTTCCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e7b4bce7b72b2b7f39105ad94e1b57c355c35ae1cc6409a9205634f15d2cd3ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50