Protein

View in Explore
Genbank accession
QVV97012.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,46
Seq2Symm
C3 confidence 0,936
C3 0,936
C1 0,129
I 0,083
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MANWSNITPENSNEKDDEFIIRHQGINYLQKRDVVAASMSNARWLAEGNYLAGSEVKGSDNIWYTAVVNTGSDYGNSTNPVTKVDDSVWVQKVYEVTPLNDDWNGFFTRNHITQLPSPAGVPATSGSGGTVYGADDEWSIGNFTTGGVISLDNDGLVFSQGIYKLFTFTVEQLSLIDVTKVPVYIVGQDGSRHFVKHNGTGVVVTKPNTTTLKVQVNNAILAELGITKVFSFFVTATVGFVQEKGDLALPSSLGFFEIEGLPQENGFIITNMTLGGKRVIIQNVTFGPITNGGSATVPWITPFPNAVFNCVASPLGLGANAASSSMATGNPTVNGVNVYNWGTIQAKVRIFAIGY
Physico‐chemical
properties
protein length:355 AA
molecular weight: 38095,26370 Da
isoelectric point:5,01260
aromaticity:0,10423
hydropathy:-0,01775

Domains

View on InterPro
Domain architecture
QVV97012.1
1 355 aa
RBD 262–355
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QVV97012.1
1 355 aa
Domain Start End Length (AA) Confidence
N-terminal 1 133 133 0,9615
Central domain 134 332 200 0,1121
C-terminal 333 355 22 0,9987
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage ICP1 [NCBI] · taxon 979525
Uroviricota Caudoviricetes Mohonavirus Mohonavirus ICP1
Host
Vibrio cholerae O1 [NCBI] · taxon 127906
Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio cholerae

Coding sequence (CDS)

Genbank protein accession
QVV97012.1 [NCBI]
Genbank nucleotide accession
MW794140.1 [NCBI]
CDS location
range 32024 -> 33091
strand -
CDS
ATGGCAAACTGGTCAAATATTACACCAGAGAATAGTAATGAAAAAGATGATGAGTTTATTATTCGTCACCAAGGTATCAACTACTTACAGAAACGAGATGTAGTTGCTGCTAGTATGAGCAATGCACGTTGGCTTGCTGAAGGTAACTATTTAGCTGGAAGTGAAGTAAAGGGTAGTGATAATATTTGGTATACTGCGGTCGTAAACACAGGTAGTGATTACGGGAACAGTACCAACCCTGTAACTAAGGTTGATGATTCGGTATGGGTACAAAAAGTATATGAAGTCACCCCCCTAAACGATGACTGGAACGGTTTCTTCACAAGAAACCACATAACTCAACTACCATCACCTGCAGGAGTACCAGCTACCAGTGGTTCTGGGGGTACTGTATATGGTGCTGATGACGAGTGGTCTATTGGAAACTTCACCACAGGTGGGGTTATTTCGCTTGATAATGATGGTCTTGTATTTTCTCAAGGAATCTACAAACTATTCACGTTCACTGTTGAGCAGTTGTCCCTTATTGATGTCACCAAAGTTCCGGTCTATATCGTTGGTCAAGATGGTTCGCGGCACTTTGTTAAACACAACGGAACGGGTGTGGTTGTCACAAAGCCAAATACCACAACTCTAAAAGTGCAGGTTAACAATGCAATTCTTGCCGAGCTTGGTATTACGAAAGTGTTTAGTTTTTTTGTGACTGCTACGGTTGGTTTCGTTCAAGAAAAAGGTGATCTTGCTCTACCGTCTTCGCTTGGATTTTTTGAGATCGAGGGTCTTCCTCAAGAAAACGGCTTTATCATCACAAATATGACTCTTGGGGGGAAGAGGGTAATCATACAAAACGTAACCTTCGGACCAATTACCAATGGGGGTAGTGCAACTGTACCATGGATTACCCCGTTCCCTAATGCGGTTTTCAACTGCGTAGCTTCACCACTAGGTCTGGGAGCAAACGCGGCCTCTTCGTCGATGGCCACAGGTAACCCTACTGTTAATGGAGTTAACGTATACAACTGGGGTACAATACAAGCTAAAGTAAGAATATTTGCGATAGGTTATTAA

Genome Context

Tertiary structure

QVV97012.1
ESMFold structure
Source ESMFold
pLDDT 64.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Temporal Shifts in Antibiotic Resistance Elements Govern Virus-Pathogen Conflicts Legault,K.N., Hays,S.G., Angermeyer,A., Mckitterick,A.C., Johura,F., Sultana,M., Alam,M. and Seed,K.D. 2020 34326207 GenBank