Protein

View in Explore
Genbank accession
AUR91921.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MACSDYPTQQTAKTFKLDAETVNEVVTSSDDRTSPASDGETKLTLAGIENLAEEQRDQFDETFTAQFAYKRIGNISDYAGQSLAETDKLNAYQYPDDSGEWYGPIQSQVFPITIPVNPSTDNGWALVNAVTTDSIGLLTNYQSASVADMVAGNPVAIDIGDTCLVSGTVYIRRSTANSDIRDFEALTPIYASGFHPFDGTDATPSLLSMALISDDKNVIFPNGGSVILTQELNFAKAKSVDFGRIVVNCDFSDTDRPITIGATTVTEVGELTSELSKLSTTITLSDVTNVVRGSMLSIYNPVDYSFSGFRASYRQGEFQFVSSISGNDVTIDASTIETYPSGTKIYLIDTTTTKLTGELTVNNTGAYSVGYGLRVMSNVNADYAGLKVSLNNSTHALSLDRNVGCFGSSMIAWQRSVTTSGLDYGLVQGSCQSNTFEGSFHAERHGSATGGDGSAGSVVNRFLTVRGRITTTGEGSVQAADFHGNTEFCRYGGYLEGASLGGNASTIEEGSVVVSPKADLPSLAYSELKSTKHTAKNVTVICYGDPGSRGAIDVGGNSDVVTEFTTIGGAFDFRGCHIESPDKQSHLVAVRNRGATVDFDILLDGMTIDAQNAATLIACSAVSGSEPNLVSLYNTPQNLSISASGDKVLGWEKFGRVRFTLDTSTNRMNASVSYDYPFPLGRVPLVTSCCSRSVIGSELIQSVAVSPDTNSIDVRIATRDGSNFSSSVDVDVRWKAEMVESSTVVTVP
Physico‐chemical
properties
protein length:748 AA
molecular weight: 79589,06960 Da
isoelectric point:4,54856
aromaticity:0,08021
hydropathy:-0,14305

Domains

Domains [InterPro]
DC_0489
STR
1–748
DC_0489
IPR049350
STR
261–346
IPR049350 IPR054136
AUR91921.1
1 748
Architecture
STR
STR 1-748
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR91921.1
1 748
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,9925
Central domain 205 636 433 0,9878
C-terminal 637 748 111 0,9663
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-636
C-terminal
637-748

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.167.O._10N.261.51.F2
[NCBI] 		1881211 No lineage information
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR91921.1 [NCBI]
Genbank nucleotide accession
MG592534 [NCBI]
CDS location
range 18370 -> 20616
strand +
CDS
ATGGCATGTTCAGACTACCCAACACAACAAACGGCAAAGACTTTCAAGCTCGATGCTGAAACAGTTAACGAGGTCGTTACTTCTAGTGATGATCGCACATCACCAGCCAGTGACGGCGAGACAAAGCTAACCCTTGCAGGCATTGAGAATCTAGCAGAGGAACAACGCGATCAATTTGACGAAACGTTCACGGCTCAGTTTGCGTATAAGCGCATTGGCAATATTTCAGACTATGCAGGCCAATCGCTTGCTGAGACTGACAAGCTGAACGCTTACCAATATCCTGACGACTCTGGAGAATGGTATGGACCTATTCAGTCGCAAGTATTCCCCATTACAATTCCTGTAAACCCATCAACTGATAATGGGTGGGCGTTAGTTAATGCCGTAACCACTGACTCAATTGGTCTCCTCACCAACTACCAGTCCGCCAGTGTTGCTGATATGGTTGCTGGCAATCCTGTTGCAATTGATATTGGTGACACCTGCCTAGTTTCAGGCACTGTGTACATTAGGCGATCTACAGCTAACAGCGATATAAGAGATTTTGAGGCATTGACGCCAATTTATGCCTCAGGCTTTCATCCATTCGATGGTACAGACGCGACACCATCACTGTTAAGTATGGCCCTTATCTCAGATGATAAAAACGTTATTTTTCCGAATGGCGGATCTGTGATCCTCACTCAAGAGCTTAATTTTGCAAAAGCAAAGAGTGTGGATTTTGGCAGGATTGTAGTGAATTGTGATTTTTCCGACACGGACAGACCCATTACTATTGGTGCAACAACAGTCACGGAAGTGGGGGAGTTAACGTCGGAACTCAGTAAGCTATCAACAACTATCACACTGAGCGATGTCACAAATGTAGTTCGCGGCTCTATGCTGTCTATCTACAACCCAGTCGATTATAGTTTTAGTGGGTTTCGTGCGTCATATCGCCAAGGTGAGTTTCAGTTTGTTTCTAGTATTTCCGGCAACGATGTCACCATTGATGCGTCAACTATTGAAACATACCCATCAGGCACAAAAATCTACCTTATAGACACGACCACAACCAAATTAACGGGAGAGCTTACTGTAAATAATACAGGTGCGTATTCTGTAGGTTACGGCCTCCGTGTCATGTCGAATGTTAATGCTGACTATGCTGGTTTGAAAGTAAGTTTAAATAACTCCACACACGCATTATCTCTTGACAGAAACGTAGGTTGCTTTGGTAGCTCAATGATTGCATGGCAGCGCTCAGTTACAACATCTGGGTTGGATTACGGGCTTGTGCAGGGAAGTTGTCAAAGCAATACTTTTGAGGGGTCATTTCACGCTGAGAGACACGGGAGCGCTACGGGTGGTGATGGTTCTGCTGGTAGTGTAGTTAACAGATTTCTGACGGTCAGAGGTAGGATTACCACTACAGGCGAGGGGTCGGTTCAAGCGGCCGATTTTCATGGCAACACTGAGTTTTGTAGGTATGGTGGATATCTGGAAGGAGCATCGCTGGGAGGGAACGCTTCAACCATTGAAGAGGGCAGTGTTGTTGTATCTCCTAAAGCAGATCTTCCTTCTTTAGCTTATTCTGAGCTAAAATCAACAAAGCATACCGCTAAAAACGTCACTGTTATATGTTACGGAGATCCTGGAAGTCGCGGAGCTATTGATGTAGGTGGCAACTCTGACGTGGTCACAGAGTTCACCACTATTGGAGGCGCGTTTGACTTTAGGGGTTGCCATATAGAATCCCCAGATAAGCAGAGCCACTTAGTCGCAGTTAGAAACAGAGGTGCAACTGTTGACTTTGACATCCTGCTTGATGGCATGACCATAGACGCACAAAATGCGGCAACGCTTATTGCCTGCTCGGCTGTTTCTGGTAGTGAGCCAAATTTAGTCTCACTGTACAACACACCACAAAACCTATCAATATCAGCCTCTGGAGACAAAGTACTTGGTTGGGAGAAGTTTGGTAGAGTCAGGTTTACGCTGGATACATCAACCAATAGGATGAATGCATCTGTAAGCTATGATTACCCGTTCCCACTAGGGAGGGTCCCGCTAGTGACGTCATGCTGTAGCAGGAGCGTCATTGGCTCGGAGCTGATACAAAGTGTGGCTGTAAGTCCAGATACTAACAGCATTGATGTTCGCATTGCCACGCGGGATGGGAGCAACTTTTCGTCATCTGTTGATGTTGATGTTCGATGGAAGGCGGAAATGGTAGAGTCCTCCACTGTAGTAACGGTGCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9dbf50e5d1789febc3200f0f7c1d90b4b4238f8fcb9a5d4e205afe72bf25880d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7863
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank