Protein

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Genbank accession
UPW41803.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Seq2Symm
C1 confidence 0,708
C1 0,708
C2 0,478
C3 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MVWIKLVRNTCPEVLDPSKPVIGFLSFRGVDADPLFTLEPAVKEKYGRIPKGHYYVDWCMSPRFGRRMLRLRSVPHRSGILFHAGNTEADTRGCILVGCSADKNNAVLYRSKDALEYLIDVLGVRTRKDCRNVAIIEIIEDELPF
Physico‐chemical
properties
protein length:145 AA
molecular weight: 16509,06050 Da
isoelectric point:8,86616
aromaticity:0,08966
hydropathy:-0,12345

Domains

View on InterPro
Domain architecture
UPW41803.1
1 145 aa
STR 22–120 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Peromfec virus RodF7_5 [NCBI] · taxon 2929354
Phixviricota Microviricetes Peromfec virus RodF7_5
Host No host information

Coding sequence (CDS)

Genbank protein accession
UPW41803.1 [NCBI]
Genbank nucleotide accession
OM869668.1 [NCBI]
CDS location
range 4423 -> 4860
strand +
CDS
ATGGTTTGGATTAAATTGGTACGTAATACTTGTCCTGAAGTTCTTGACCCGTCTAAACCTGTTATTGGTTTTTTAAGTTTTAGAGGAGTTGACGCCGACCCTCTCTTTACATTGGAGCCTGCGGTTAAAGAAAAATACGGCAGGATTCCAAAAGGTCATTATTATGTAGATTGGTGTATGTCTCCCCGCTTTGGCCGTCGTATGCTTCGTCTTCGTTCAGTACCTCATCGTTCTGGTATTCTCTTTCATGCAGGTAATACGGAAGCGGACACAAGAGGATGTATTCTTGTCGGTTGTTCTGCTGATAAAAATAACGCTGTTTTATATCGCTCAAAAGATGCTTTGGAATATCTTATTGATGTTCTTGGAGTACGCACCCGTAAGGATTGTAGGAATGTTGCTATTATTGAAATAATTGAAGATGAATTACCCTTTTGA

Genome Context

Tertiary structure

UPW41803.1
ESMFold structure
Source ESMFold
pLDDT 80.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Towards deciphering the DNA virus diversity associated with rodent species in the families Cricetidae and Heteromyidae Lund,M., Larsen,B.B., Gryseels,S., Kraberger,S., Rowsey,D.M., Steger,L., Yule,K.M., Upham,N.S., Worobey,M., Van Doorslaer,K. and Varsani,A. — 37276766 GenBank