Protein

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Genbank accession
UPW41803.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVWIKLVRNTCPEVLDPSKPVIGFLSFRGVDADPLFTLEPAVKEKYGRIPKGHYYVDWCMSPRFGRRMLRLRSVPHRSGILFHAGNTEADTRGCILVGCSADKNNAVLYRSKDALEYLIDVLGVRTRKDCRNVAIIEIIEDELPF
Physico‐chemical
properties
protein length:145 AA
molecular weight: 16509,06050 Da
isoelectric point:8,86616
aromaticity:0,08966
hydropathy:-0,12345

Domains

Domains [InterPro]
IPR043732
STR
22–120
IPR043732
UPW41803.1
1 145
Architecture
STR
STR 22-120 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Peromfec virus RodF7_5
[NCBI] 		2929354 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW41803.1 [NCBI]
Genbank nucleotide accession
OM869668.1 [NCBI]
CDS location
range 4423 -> 4860
strand +
CDS
ATGGTTTGGATTAAATTGGTACGTAATACTTGTCCTGAAGTTCTTGACCCGTCTAAACCTGTTATTGGTTTTTTAAGTTTTAGAGGAGTTGACGCCGACCCTCTCTTTACATTGGAGCCTGCGGTTAAAGAAAAATACGGCAGGATTCCAAAAGGTCATTATTATGTAGATTGGTGTATGTCTCCCCGCTTTGGCCGTCGTATGCTTCGTCTTCGTTCAGTACCTCATCGTTCTGGTATTCTCTTTCATGCAGGTAATACGGAAGCGGACACAAGAGGATGTATTCTTGTCGGTTGTTCTGCTGATAAAAATAACGCTGTTTTATATCGCTCAAAAGATGCTTTGGAATATCTTATTGATGTTCTTGGAGTACGCACCCGTAAGGATTGTAGGAATGTTGCTATTATTGAAATAATTGAAGATGAATTACCCTTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d8c62ee0e84ec41d45b715e146bc9c95ce953fd2ae3f548a322ba1c826920111
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8080
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Towards deciphering the DNA virus diversity associated with rodent species in the families Cricetidae and Heteromyidae Lund,M., Larsen,B.B., Gryseels,S., Kraberger,S., Rowsey,D.M., Steger,L., Yule,K.M., Upham,N.S., Worobey,M., Van Doorslaer,K. and Varsani,A. — — GenBank