Protein

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Genbank accession
QBJ03495.1 [GenBank]
Protein name
baseplate protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAYETPTPAINSNALVFHAINYFNNLNNCYIVIGKTSSWPVDAQPPVPVDGDNVTEVAGYFKPTCYLCYKTTADKKDDSTLSYGNDFYQPVSLADAYSKKASYVYYTVTIKPDDISNVNTFRQVGLNFGVTLKSGVSGVILTPSNVDNSGYTHFILNSQPFMITDNRSIKINMLISEEKDISGSNVDTDVTSEITTVLPTTVNQ
Physico‐chemical
properties
protein length:204 AA
molecular weight: 22418,79060 Da
isoelectric point:4,64138
aromaticity:0,10784
hydropathy:-0,20000

Domains

Domains [InterPro]
IPR058040
TAS
14–175
IPR058040
QBJ03495.1
1 204
Architecture
TAS
TAS 14-175 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBJ03495.1
1 204
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,2933
Central domain 204 203 1 0,3380
C-terminal 204 204 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-203
C-terminal
204-204

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage 521B
[NCBI] 		2510942 Uroviricota > Caudoviricetes > Herelleviridae > Tybeckvirus tv521B >
Host Lactobacillus brevis
[NCBI] 		1580 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ03495.1 [NCBI]
Genbank nucleotide accession
MK504443 [NCBI]
CDS location
range 98163 -> 98777
strand +
CDS
GTGGCCTACGAAACCCCTACACCAGCAATTAATAGTAATGCGTTAGTTTTTCATGCTATTAATTACTTTAATAATCTAAATAACTGCTATATAGTAATTGGTAAAACAAGCTCTTGGCCGGTTGATGCTCAGCCTCCTGTTCCTGTTGATGGAGATAATGTCACGGAAGTTGCAGGATACTTTAAGCCAACTTGTTATCTTTGCTATAAAACAACCGCAGATAAAAAAGATGATTCAACATTATCTTATGGAAATGACTTTTATCAGCCGGTTTCCTTAGCAGATGCTTATAGTAAAAAGGCTTCTTATGTATATTATACCGTAACAATAAAACCAGATGATATTTCAAATGTTAATACATTCAGACAAGTAGGTCTTAACTTTGGGGTAACTCTTAAATCTGGGGTATCTGGGGTAATTTTGACTCCAAGCAATGTAGATAATTCTGGATATACTCATTTTATTCTTAACAGTCAGCCATTCATGATTACCGATAATAGAAGTATTAAAATTAATATGCTCATTTCAGAAGAAAAGGATATTAGTGGATCTAATGTAGATACTGACGTTACCTCAGAAATAACAACAGTTTTGCCTACTACTGTAAATCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb4935bd758aa7b5df90a53fd4638e2d816f50ba5f02d4a9844c1953241a2a43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6652
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank