Protein

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Genbank accession
WPJ68089.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,68
Protein sequence
MPLITQSIKNLKGGISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNIDVGSNPKFHLINRDEHEQYYIVFNGSNIQVVDLSGNQYSVSGEVDYVKSSNPRDDISVVTVADYTFVVNRKVVVKGGSEKSHSGYNRKARALINLRGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVAAYPNFTFDLGSGFLLITAPEGTDINSVETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSSDEYYVMYDSNTKTWKVTVAPGVVTGFDVTTMPHALVRQPDGSFEFKTLDWSKRGAGNDDTNPMPSFVDAAINDVFFYRNRLGFLSGENVIMSRSASYFSFFPKSVATLSDDDPIDVAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTSKSIQLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTSIKRYFAVADVSDVKDADDTTGHVLSYIPNGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDGVQLQASWSHWEFPKDDKILASASIGSTMFIVRQHQGGVDIEHLKFIKEATDFPSEPYRLHIDSKVSMVIPIGSYNADTYKTTVDIGSAYGGNAPSPGRYYLIDSKGAYVELGDLTGISTVVTLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDDSGTQSEDTGRLQLRRAWVNYGDTGALRLIVRNGEREFVNTFNGYTLGQQTIGTTNIGDGQYRFAMNGNALTTSLTLESDYPTPVSIVGCGWEASYAKKARSV
Physico‐chemical
properties
protein length:785 AA
molecular weight: 86221,53810 Da
isoelectric point:5,61623
aromaticity:0,10701
hydropathy:-0,25490

Domains

Domains [InterPro]
IPR058003
TTP
1–784
IPR058003
WPJ68089.1
1 785
Architecture
TTP
TTP 1-784 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ68089.1
1 785
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9830
Central domain 138 342 206 0,0986
C-terminal 343 785 442 0,1752
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-342
C-terminal
343-785

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PRF-SP8
[NCBI] 		3079527 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Paratyphi C
[NCBI] 		57046 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ68089.1 [NCBI]
Genbank nucleotide accession
OR290782 [NCBI]
CDS location
range 13543 -> 15900
strand -
CDS
ATGCCGCTTATCACACAAAGCATAAAAAATCTTAAAGGGGGCATTAGCCAGCAGCCTGATATACTGAGGTTCTCAGACCAAGGCGAGGCACAGGTTAACTGCTGGTCATCCGAGAGTGATGGCCTCCAGAAGCGCCCACCTACAGTCTTCAAGCGCAGACTTAACATCGACGTGGGGAGCAACCCTAAGTTCCACCTGATTAACCGTGACGAGCATGAGCAGTATTACATCGTGTTCAATGGGTCCAACATTCAGGTAGTTGACTTGAGTGGCAATCAATACTCAGTGTCAGGTGAGGTAGACTACGTTAAGTCCTCCAACCCACGAGATGACATCAGTGTCGTTACCGTTGCAGACTATACGTTCGTAGTTAACCGTAAGGTTGTCGTCAAAGGTGGAAGCGAGAAGTCACACTCTGGCTATAACCGCAAAGCTCGTGCTTTGATTAACCTGCGTGGTGGACAGTATGGTCGCACCCTTAAGGTGGGAATCAACGGTGGCGTTAAGGTCTCACATAAGCTACCAGCAGGTAATGATGCCGAGAATGACCCACCTAAGGTGGATGCTCAGGCAATCGGCGCCGCTCTGAGAGACCTTCTTGTTGCTGCCTATCCTAACTTCACGTTCGACCTTGGGTCTGGATTCCTGTTAATCACTGCCCCTGAAGGGACCGACATTAACTCAGTGGAGACGGAGGATGGCTACGCTAACCAGCTAATAAGCCCAGTCCTAGACACTGTGCAGACAATCTCTAAACTACCTCTTGCCGCTCCTAATGGGTATATCATTAAGATTCAAGGTGAGACAAACAGTAGCTCCGATGAATACTACGTGATGTATGACTCCAACACTAAGACGTGGAAGGTAACAGTGGCGCCGGGAGTTGTCACTGGTTTTGATGTCACCACAATGCCACATGCTCTGGTCAGACAGCCTGATGGCTCCTTTGAGTTTAAGACTCTTGATTGGTCCAAGCGTGGTGCTGGTAACGATGACACAAACCCTATGCCTAGCTTCGTGGATGCTGCGATTAACGATGTGTTCTTCTACAGGAACAGACTTGGGTTCTTGTCTGGTGAGAACGTAATAATGAGCCGTTCAGCCAGCTACTTTTCGTTCTTCCCTAAGAGTGTGGCGACACTGAGTGATGATGACCCTATTGATGTAGCTGTAAGTCACCCTCGAATCTCAATCCTTAAGTATGCAGTTCCGTTTAGCGAGCAGCTACTACTTTGGTCGGATGAGGTTCAGTTCGTGATGACAAGCTCTGGGGTCCTTACCTCGAAGTCTATCCAGCTTGATGTAGGCTCAGAGTTTGCCTTAGGTGACAATGCCAGACCGTTCGCTGTAGGACGCTCAGTCTTCTTCTCAGCGCCTCGTGGGTCATTCACCAGCATTAAGCGATACTTTGCTGTAGCTGATGTGTCTGATGTGAAGGATGCCGATGATACAACTGGTCACGTACTGTCCTACATCCCTAACGGGGTGTTTGATATTCAAGGTACAGGTACTGAGAACTACATCTGCGTCAACTCTACAGGTGCATACAACAGAATCTACATCTACAAGTTCTTGTTTAAGGACGGCGTACAACTTCAAGCCTCTTGGTCACACTGGGAGTTCCCTAAAGATGATAAGATTCTGGCGTCTGCCTCTATTGGCTCTACCATGTTCATCGTTCGTCAGCATCAAGGAGGGGTAGACATTGAGCACCTTAAGTTCATAAAGGAGGCAACTGACTTCCCGTCAGAGCCATATAGACTACACATTGACTCAAAGGTGTCTATGGTAATTCCAATTGGCTCATATAATGCTGACACCTACAAGACTACGGTTGACATTGGTTCTGCTTATGGTGGAAACGCTCCGTCTCCCGGTCGGTACTATCTGATTGACAGTAAGGGTGCTTATGTGGAACTTGGGGACTTGACCGGTATCTCTACTGTGGTTACCCTCAACGGCGATTGGTCAGGACGTACAGTGTTCATCGGACGGTCCTATCTGATGTCCTACAAGTTCTCACGGTTCCTGATTAAGATTGAAGATGATAGTGGCACTCAGTCTGAAGACACTGGTCGTCTACAGCTTCGTCGCGCTTGGGTCAACTACGGTGACACTGGCGCTCTGAGACTCATTGTCAGAAATGGTGAGCGGGAGTTCGTAAATACCTTCAACGGGTACACACTTGGTCAGCAAACCATCGGGACTACAAACATTGGCGACGGGCAGTATCGCTTCGCTATGAATGGTAACGCATTGACCACGAGTCTAACCTTAGAGTCCGACTATCCTACCCCAGTGTCAATCGTTGGTTGTGGCTGGGAGGCGTCATACGCTAAGAAAGCTCGTTCCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b56c55c4c4f6392f0fffd3f400ec6bdfaf3596445440b1d8caf960c3c2f3cd7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3373
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50