Protein

View in Explore
Genbank accession
YP_009881006.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,63
Protein sequence
MSEVKTSFRASYGLDAAGEKVINVAKADKTVMTDGVNVEYLIQENTTQQYDPERAYEKGFIIEFNDRLWIAEQDIPKPAGSFNEGYWRPVRTDPKWKPIDSGKYQLHVGDYITVDTRAGLAVELTLPTNPIPQEGDTIVVKDVGGQPGYTSVLVFAPVQSIIDKGVSIPQKRMTIPFSEWTFVYTKSQWSLYDGVEAPVARTVTTSGPTQIQSGDTILRNYDKVAPIVLTFPKFANNGDIIHFVGMNENTVPYYHLELNAFDSNTSIGSPGKSSQIFYRSLSGYFIFNSLTSTWYLYDSDMTNRLRTVSTDTEIFPNETVAVVGKDNTTTQTIKLTLPQNVQPGDQVTISLNYIRKGQTVNIVPKGTDMILTNQNLTQFPKRSSYPPAANWVNTNLLSYNGSNDYPPVLTFAYIDMGPIKQWLMVSCLPVLERVDPSTDDTRTRLGVIALANQSQANLDKENISVTANPLAREVAITPETLANRTALDSRRGIARIAKQEEVNLTTDDAALAYDTIVTPKTLNGKKATETMVGLAEIATQAETNSNTDDSRIITSKKLDGRRATPALAGVAKLVATGGTAPVKGGTNTRDTAGTGIYNHADFENIVTPKTLREYYSTEMALGTVYLANSAEVISGAATLAKYPLAVTPETLHTKTATDERIGFSQVAKQAEVDAGTDYFKFVTPKTLAGRIAREDLAGIAKLATQGEFDAGTAGLISGPDKIKTFFSRAERTIVNNAEGLTQSGSIWTGLKLNILAPSETQRGTARYATQDETDKGVDATTIVTPAKLHAKKATTDAEGIVRMANTAETVDGTAYNLAVSPGNLKYVVQSELTWEATPERRGFIKLSTGSTTWQGNTVDGNANIDIETQFNKNGMAVSPYEFNRVLRNYLPIGAKAVDSDKLDGLDSSQFIRRDIAQVVNGALTLTQPTTATYITASNDVSVQALLSANQINVRKSGTPDDTSVTKNAGINLYGAPQSATGRPTYGIHFSSTGGTDPNGIHGYGGGTWGTYFAQSISSAAEQRAWYFQQIFNGAVKNVGSITAQGDVWFDGVINSDKTFRLKNSVIAEKDSGDNLIFGTTDQQMYLRSKAADIKVQEVVGGTSYQVITSKNFVDEGNKTYVRKTGDSMTGRLNISQPITATINQSAATPNAVPNASNFGTWTIDITDPAIYNTMRPYVVGVNAINKETSEVLPWFDKYEEFNGPGTLSQFGSSASNGSGTYQIWAPRPPADKANLPGHIAGTMWTRQWNPITNKWDGWGRVFTNNHPPLPTDIGAMSNNGSVFDSMRIRDWIQVGNLRIYADPSTKTVRFDWIE
Physico‐chemical
properties
protein length:1314 AA
molecular weight: 143125,31890 Da
isoelectric point:5,59821
aromaticity:0,08676
hydropathy:-0,36248

Domains

Domains [InterPro]
DC_1986
ATT
7–128
DC_1986 DC_1209
IPR048391
ATT
1153–1262
IPR048391
YP_009881006.1
1 1314
Architecture
ATT
STR
ATT
STR
ATT 7-128 | STR 345-1152 | ATT 1153-1262 | STR 1263-1297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_ApiM_fHyAci03
[NCBI] 		2269366 Uroviricota > Caudoviricetes > Pantevenvirales > Twarogvirinae > Lazarusvirus
Host Acinetobacter pittii
[NCBI] 		48296 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009881006.1 [NCBI]
Genbank nucleotide accession
NC_049438 [NCBI]
CDS location
range 150336 -> 154280
strand +
CDS
ATGTCTGAAGTAAAAACAAGTTTCCGTGCGTCATACGGTCTAGACGCGGCTGGTGAGAAAGTAATTAATGTTGCAAAGGCTGACAAAACTGTCATGACCGATGGTGTCAACGTCGAATATCTCATTCAGGAAAATACGACCCAACAATATGACCCAGAGCGTGCCTATGAAAAAGGATTCATTATAGAATTTAATGATCGTCTCTGGATTGCAGAACAAGACATCCCTAAACCTGCAGGTAGCTTCAATGAAGGGTACTGGCGCCCAGTACGTACAGACCCAAAGTGGAAGCCTATCGATTCTGGTAAATATCAGTTACATGTTGGTGATTATATCACTGTAGATACGCGTGCAGGATTAGCTGTAGAACTAACATTACCTACTAATCCTATACCGCAGGAAGGCGATACAATTGTTGTAAAGGATGTCGGCGGGCAACCAGGTTACACATCGGTGTTAGTCTTTGCACCTGTGCAGTCAATTATTGACAAAGGCGTAAGTATTCCACAAAAACGAATGACTATTCCATTTTCTGAATGGACATTTGTATACACAAAGAGCCAATGGTCATTATATGATGGCGTAGAAGCTCCAGTAGCAAGAACTGTTACTACATCTGGTCCTACTCAAATCCAATCAGGCGATACGATTCTTAGAAACTATGATAAAGTAGCTCCTATTGTATTGACTTTTCCTAAATTTGCCAACAATGGCGACATAATTCATTTTGTAGGCATGAATGAAAATACAGTGCCTTATTATCACTTAGAGCTTAATGCATTTGATAGCAATACAAGTATTGGTTCTCCGGGTAAGTCATCGCAAATTTTCTATCGTTCGCTAAGCGGGTATTTCATTTTTAATAGCTTGACTTCAACTTGGTATTTGTACGATTCAGATATGACAAATCGTCTTAGAACTGTTAGTACTGATACTGAGATTTTCCCGAATGAAACTGTAGCAGTAGTAGGCAAAGATAATACCACTACACAGACTATTAAATTGACATTGCCACAAAACGTGCAACCTGGCGACCAGGTAACAATTTCATTAAATTATATTAGAAAGGGACAAACTGTTAACATCGTGCCTAAAGGCACCGATATGATTTTAACAAATCAAAATCTAACTCAGTTCCCTAAACGCTCAAGTTATCCACCTGCTGCCAATTGGGTTAACACTAATTTATTGTCATATAACGGTTCAAATGACTACCCGCCAGTATTAACATTTGCATACATTGATATGGGGCCTATCAAACAATGGCTGATGGTAAGTTGTTTGCCTGTATTAGAGCGTGTTGATCCGTCAACAGATGATACTCGTACTCGTTTAGGTGTTATTGCTTTAGCAAATCAATCTCAAGCAAACTTAGACAAAGAAAATATTTCGGTTACTGCAAATCCATTAGCACGAGAAGTCGCTATCACGCCGGAAACTCTTGCCAATAGGACCGCTTTGGACAGCCGTCGTGGAATCGCAAGAATCGCAAAACAAGAAGAAGTAAACTTAACTACAGATGATGCTGCATTAGCATATGATACTATTGTTACGCCTAAGACTCTTAATGGCAAAAAGGCTACAGAAACGATGGTAGGTTTGGCAGAAATTGCTACTCAAGCCGAAACCAATAGCAACACTGACGATTCTCGTATCATCACTTCTAAGAAATTAGATGGACGACGCGCAACACCTGCTTTAGCCGGAGTCGCTAAACTTGTTGCTACAGGTGGCACTGCGCCTGTTAAAGGAGGTACAAATACGCGTGATACTGCTGGAACTGGCATTTATAATCATGCAGACTTTGAGAACATTGTTACACCTAAAACATTGAGAGAATATTATTCTACAGAAATGGCATTAGGTACAGTGTATCTTGCAAATTCTGCTGAAGTTATTTCTGGTGCAGCTACATTAGCTAAATATCCATTAGCAGTAACTCCTGAAACTTTGCACACTAAGACCGCTACCGATGAGCGTATAGGCTTTTCACAAGTGGCTAAACAAGCCGAAGTTGATGCTGGAACAGATTATTTTAAATTTGTTACACCGAAAACTTTAGCAGGAAGAATTGCACGAGAAGACTTAGCAGGTATCGCAAAATTAGCAACCCAAGGCGAATTTGACGCTGGTACAGCTGGATTAATTTCAGGTCCAGATAAAATTAAGACATTTTTCTCTCGCGCTGAAAGAACTATTGTCAATAATGCTGAAGGTTTAACACAATCTGGTAGCATTTGGACCGGGTTAAAGTTGAATATTCTTGCACCATCCGAGACCCAACGTGGTACAGCAAGATATGCTACGCAAGATGAAACAGATAAAGGTGTTGATGCCACAACAATTGTGACTCCTGCAAAATTACATGCTAAGAAAGCCACTACAGATGCAGAAGGTATTGTCAGAATGGCAAATACTGCTGAGACGGTAGATGGTACTGCATATAATTTAGCAGTATCGCCTGGCAATCTAAAATATGTTGTACAATCAGAATTGACATGGGAGGCCACACCTGAACGTAGAGGTTTCATTAAACTTTCTACGGGTTCGACAACATGGCAAGGCAACACAGTTGATGGTAATGCAAATATCGACATTGAAACTCAATTTAACAAAAATGGTATGGCTGTTTCGCCGTATGAGTTCAACCGTGTTTTAAGGAACTATTTACCTATTGGCGCAAAAGCAGTTGATTCTGATAAATTAGATGGATTGGATTCATCACAGTTTATTCGTAGAGACATTGCCCAAGTTGTTAATGGCGCATTAACACTGACACAGCCTACAACTGCAACATACATTACTGCTTCTAATGATGTATCAGTCCAAGCTCTTTTATCTGCTAATCAGATTAACGTACGAAAATCTGGAACTCCTGATGATACGTCTGTTACAAAGAACGCTGGTATAAATTTGTATGGCGCTCCACAATCTGCTACAGGACGTCCGACCTATGGTATTCATTTTTCTAGTACCGGTGGCACAGACCCTAATGGGATACATGGCTATGGCGGCGGGACTTGGGGTACGTATTTTGCTCAAAGCATCTCTAGCGCAGCTGAACAACGTGCATGGTACTTCCAGCAGATTTTTAACGGTGCAGTTAAAAACGTTGGCTCTATCACAGCGCAAGGCGATGTTTGGTTTGATGGTGTTATTAACAGTGATAAAACATTCAGACTTAAAAATAGCGTCATAGCTGAAAAGGATTCAGGCGATAATCTAATTTTCGGTACGACTGATCAGCAAATGTACCTTCGTTCTAAAGCAGCAGATATAAAGGTTCAAGAAGTAGTTGGTGGAACTTCTTATCAAGTTATTACATCTAAAAACTTTGTTGATGAAGGTAACAAAACTTATGTGAGAAAGACTGGCGATTCAATGACTGGGCGCCTCAATATTTCTCAACCTATAACTGCTACTATCAACCAATCTGCTGCGACACCAAATGCAGTTCCAAATGCCAGCAATTTTGGTACATGGACTATTGATATAACTGATCCTGCAATATATAATACTATGCGCCCATATGTTGTTGGAGTAAATGCAATCAATAAAGAGACAAGTGAAGTCTTGCCTTGGTTTGATAAGTACGAGGAGTTTAATGGGCCTGGTACATTGTCACAATTTGGATCTTCTGCTAGTAATGGTTCTGGTACATACCAAATCTGGGCGCCACGTCCGCCAGCAGATAAAGCGAATTTACCTGGGCATATTGCTGGCACAATGTGGACAAGACAGTGGAATCCTATTACAAATAAATGGGATGGCTGGGGCAGAGTATTCACAAATAACCATCCACCATTGCCTACAGACATTGGCGCTATGAGCAATAATGGTTCAGTTTTTGATTCTATGAGAATTAGAGATTGGATTCAAGTAGGTAATTTGAGAATTTATGCAGACCCATCTACAAAAACCGTTCGTTTTGATTGGATTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba34446b97b820cd1a2d8a56584d2e9fc5b868feee409f1fbde7f2f534f36c62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5193
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of vB_ApiM_fHyAci03, a novel lytic bacteriophage that infects clinical Acinetobacter strains Pulkkinen,E., Wicklund,A., Oduor,J.M.O., Skurnik,M. and Kiljunen,S. 2019 — GenBank