Protein

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Genbank accession
YP_010246351.1 [GenBank]
Protein name
exonuclease
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGVLAALLSQPTAADPPPVRETITTVEEAGNYSRTFIDHEPPETREELYRMLEVPRGYSIVGDITYRNRELVNGSTVSAYNYKLRELPQPLDFDGLAERVLKSPPANPINQPGPYWFVFQAGDLQLGKIARDGSTEQIVETYMQSVRAAVVEYESLADEFGVSGVQLSFPGDCMEGVVSQGGRNIWLTQETITEQTRIFRRLLLWTVDQFAPIANHVYVDVVNGNHDEANRQVNTKPGDGWATECAIALSDAMALNPGAYGHVEVRVPDSWCGHMTVPVGDSLVTVAHGHQWRRGKGMGWWAEQALNLQSPTTSGVLQHGHIHTYEIETTRDRTRISSPTFDTGSDWFREIHGGDSKLGGLVYLLRSNEISRVSLV
Physico‐chemical
properties
protein length:376 AA
molecular weight: 41736,21250 Da
isoelectric point:5,12019
aromaticity:0,08511
hydropathy:-0,35213

Domains

Domains [InterPro]
DC_1722
ATT
1–169
DC_1722
IPR029052
STR
168–341
IPR029052
YP_010246351.1
1 376
Architecture
ATT
STR
ATT 1-169 | STR 170-341 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010246351.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,1540
Central domain 133 331 200 0,0066
C-terminal 332 376 44 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-331
C-terminal
332-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Octobien14
[NCBI] 		2483673 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010246351.1 [NCBI]
Genbank nucleotide accession
NC_060134 [NCBI]
CDS location
range 62219 -> 63349
strand +
CDS
ATGGGCGTATTGGCAGCGCTGCTTAGTCAACCGACGGCCGCAGATCCGCCACCCGTGCGGGAAACGATTACCACGGTTGAAGAGGCCGGGAACTATTCCCGAACCTTTATCGACCACGAGCCTCCCGAAACACGGGAAGAGCTGTATCGAATGTTGGAGGTTCCCCGTGGGTATTCCATTGTGGGTGACATCACTTATCGCAACCGTGAGCTTGTTAACGGCAGCACTGTATCCGCCTACAACTACAAGCTCCGCGAGCTACCCCAACCCCTGGACTTCGACGGCCTTGCCGAACGGGTCCTAAAGTCCCCGCCCGCTAACCCAATCAATCAGCCGGGTCCATACTGGTTTGTCTTCCAGGCCGGTGACTTGCAGCTCGGGAAGATTGCCCGCGACGGGTCTACTGAGCAGATCGTGGAAACGTACATGCAGTCCGTTCGGGCTGCTGTGGTCGAGTATGAGAGCTTGGCCGACGAGTTCGGCGTTTCTGGCGTCCAGTTGTCCTTCCCTGGCGATTGCATGGAAGGTGTGGTGTCCCAGGGTGGGCGGAACATTTGGCTCACTCAGGAGACGATCACGGAGCAAACGCGGATCTTCCGGCGTCTGCTGCTGTGGACGGTCGACCAGTTCGCTCCGATCGCTAACCACGTGTACGTCGATGTGGTCAACGGCAACCACGATGAAGCTAACCGGCAGGTGAACACTAAGCCTGGCGATGGTTGGGCTACCGAGTGCGCTATCGCCTTGTCGGATGCGATGGCCCTTAACCCTGGCGCTTACGGGCATGTTGAGGTCCGGGTGCCGGATTCCTGGTGCGGGCATATGACTGTGCCGGTCGGGGATTCTCTGGTCACGGTGGCTCACGGTCACCAGTGGCGGCGCGGTAAGGGTATGGGTTGGTGGGCTGAGCAAGCCCTTAACTTGCAGTCCCCGACTACTTCGGGTGTTTTGCAGCACGGACATATTCACACCTACGAGATCGAGACTACGCGCGACCGCACTCGGATCTCGTCCCCCACATTCGACACCGGCTCCGATTGGTTTAGGGAGATTCACGGTGGCGATTCTAAGTTGGGCGGTTTGGTGTACCTGTTGCGGTCTAACGAAATTTCGAGAGTGAGTTTGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2487c9671d6637ffaabc57e32ea6c7d359b343abeacbd9e54472e3f0dd1ff4cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8137
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50