Protein

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Genbank accession
YP_010765521.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MADYSQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRGGFVYKAVRTHTGSDPATANPNWARAFADFTTSSSALGSLTPRDGGIPFFISATGASVFDSTAYGRGMLNVANAAAARNYISAQESSVVLSNLSTVTRAANTVPYFNTDTSMATFNITAFGRGLVNAANAENARGFLGLANSAIITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTANKLRTPVTINGVAFDGSQNIVLPGLDTSYAGTVARLHINGANLSSADKTTQLALRNKSDNDWISLAVVDDNILQFVFRSATNPVVQIGNEVILHTGNQFSLGPTLTDARSRLGLDRLTQGSSDTQVFPSTLNNGPYLTVQPTAIGGFNGSTNGWLFRFDANGNMTHGTVPAARITGLSNSAQIPATTTAQANSLVQRDADGGFSAIAINAYGTIVGYGSNIFSRASGTGNAHIGFQRANGTELGLIWGAQSNNSMNFRVAGGSTAVSITGLDMTVTGRVNATTLNASGNVNATGNVNAGSATLNTAGNITGAAYGAYGSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYILAGDQSGGSGGPGTTRAGSQLKPYSTISYTAGALPAAGTYRCMGAFAGGGNQITLWQRIS
Physico‐chemical
properties
protein length:671 AA
molecular weight: 69811,42400 Da
isoelectric point:8,89627
aromaticity:0,08644
hydropathy:-0,12221

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010765521.1
1 671
Domain Start End Length (AA) Confidence
N-terminal 1 310 310 0,6145
Central domain 311 509 200 0,2513
C-terminal 510 671 161 0,8656
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-310
Central
311-509
C-terminal
510-671

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Paer_PsCh
[NCBI] 		2924906 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus PsCh
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010765521.1 [NCBI]
Genbank nucleotide accession
NC_073623.1 [NCBI]
CDS location
range 19095 -> 21110
strand +
CDS
ATGGCTGATTACAGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCTGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAATGGTGGAACTGGAAATGGAACCTTCACGATACCAACCTAGCGTATCTGCTACAGAAGGGCATTCCAGAGTGGACCAGCACTCAAGAGTATATTGCAAACAAATCGTTCTGCACAAGAGGCGGGTTCGTCTATAAGGCTGTTCGTACCCATACAGGTAGCGACCCGGCCACCGCTAACCCCAACTGGGCCCGAGCTTTCGCAGACTTTACCACATCTAGCTCTGCACTTGGAAGCCTGACACCAAGAGACGGTGGAATCCCGTTCTTCATTAGTGCCACAGGAGCTAGCGTGTTTGACTCTACGGCTTATGGTCGTGGAATGTTGAATGTAGCTAACGCCGCAGCAGCCAGAAACTATATTTCGGCTCAAGAAAGTTCTGTTGTACTGTCTAACCTGTCCACTGTGACTAGGGCTGCCAACACAGTTCCGTACTTCAATACGGATACCTCCATGGCTACCTTCAACATCACAGCGTTCGGAAGAGGACTTGTCAACGCGGCTAATGCTGAAAACGCAAGAGGTTTCCTAGGCCTAGCTAACTCTGCTATCATCACAGCCGATCCAGCTAACAGAGCCCACACTCTGGTCTATAGAGATGCTGCTGGCAACTTCAACGCTGGCGTAATCACTGCTACCCTGTCTGGAAACGCAACTACAGCTAACAAGCTTAGAACCCCAGTTACAATCAACGGTGTGGCGTTTGACGGAAGCCAAAACATTGTTCTTCCGGGCCTAGATACAAGTTATGCGGGAACGGTTGCACGTCTTCACATCAACGGAGCGAACCTTTCGAGTGCAGATAAGACTACTCAGCTAGCACTGAGGAACAAATCTGACAACGACTGGATTAGCCTTGCTGTAGTGGATGACAACATTCTCCAGTTTGTATTCAGAAGCGCTACAAACCCAGTTGTCCAGATTGGCAACGAAGTTATCCTTCACACAGGAAACCAGTTCTCTCTGGGCCCGACTCTTACAGACGCTAGGTCTCGTCTGGGTCTCGACAGACTCACTCAAGGTAGCTCTGATACTCAAGTCTTCCCCAGCACCTTGAACAATGGCCCCTACTTGACCGTACAACCTACGGCTATCGGAGGATTCAACGGTAGCACTAACGGATGGCTGTTCCGATTCGACGCTAATGGTAACATGACTCATGGTACAGTTCCTGCCGCTAGAATCACTGGTCTGTCCAACTCGGCTCAGATTCCAGCCACAACTACGGCGCAGGCTAACTCTCTTGTTCAGAGAGACGCAGACGGAGGATTCAGCGCTATTGCGATTAATGCGTATGGCACTATCGTCGGGTACGGCTCTAACATCTTCAGTAGAGCATCGGGCACTGGCAACGCCCACATCGGGTTCCAGAGAGCGAACGGAACAGAACTCGGTCTTATCTGGGGGGCCCAGTCTAACAACTCGATGAACTTCCGGGTAGCTGGTGGCTCCACCGCAGTGTCGATTACCGGTCTGGACATGACTGTTACTGGAAGAGTCAATGCTACCACACTAAACGCCTCTGGAAACGTGAATGCGACAGGTAACGTCAACGCCGGGAGTGCTACACTCAATACAGCAGGGAACATCACAGGGGCCGCCTACGGAGCGTATGGTTCTCTTACCAACTGGGTAGATTCTGTATATGCGAAGAAGGGAGAGATTCCTAACGATATCGCTAGAGCAGGCGCAGCTTGGGACGCAGTTGGACAGTACATCCTAGCTGGCGATCAATCTGGAGGGTCTGGTGGACCGGGGACAACTAGAGCTGGAAGCCAGTTGAAGCCTTATTCGACTATTAGCTACACAGCAGGGGCACTACCAGCAGCAGGCACTTACAGATGTATGGGAGCGTTTGCAGGTGGTGGTAACCAGATTACCCTGTGGCAGAGAATTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43600423790ab4f60684e24da610ddd8a3345d580f01d5448b2372e88580bad1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6438
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50