Phage RBP Database

Genbank accession

YP_009605029.1 [GenBank]

Protein name

minor tail protein

RBP type

TSP

Evidence DepoScope

Probability 0,98

TSP

Evidence RBPdetect2

Probability 0,42

Seq2Symm

C1 confidence 0,968

C1	0,968
C2	0,360
H	0,004

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGSFKPLVPVRSNRPLELQRGNPLRYRYTLAGNREFPLGTTALLTVANTYGQTVGAYVGVVDGKYIDFAEAADISDTLARTDSWQLFVTYPGETMPTLLEQGQVIRIEAPYPDAPPQSSEFDGVAYEYHFGTPGLLTDPAWRIMNGHPRVYDNSLRGYPNAVAAGTLLTDLTPWADVAMLWFAPLQTDAVRLTYNTIRAHDNSNGEMWTVICSNYDMSNWAGFHHKQVFGIGDWDSDTISVVTGTGPTTFVNRASASKDTQDNQIYTAEFNPITNTFTLYVGTDMTPVVSWTDSTSVVDHGPGERYVGFGFKSTILDAGVQVSDWIIADTP

Physico‐chemical properties

protein length:	331 AA
molecular weight:	36465,18180 Da
isoelectric point:	4,59369
aromaticity:	0,11782
hydropathy:	-0,23202

Domain architecture

YP_009605029.1

1 331 aa

STR 13–106 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR055688
STR

IPR055688

YP_009605029.1

1331 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1994
ATT

DC_1994

YP_009605029.1

1331 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR055688	STR	DC_0663	13	106	InterPro cluster	LtfC/p132/Gp6, beta-sandwich domain	Central	Low	Positional only	63 proteins / 63 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_009605029.1

1 331 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	183	183	0,6546
Central domain	184	320	138	0,2723
C-terminal	321	331	10	0,8029

Note: Constraints were applied during segmentation.
Fixed 85 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Mycobacterium phage Rey [NCBI] · taxon 1034115

Uroviricota Caudoviricetes Vilmaviridae Reyvirus Reyvirus rey

Host

Mycobacterium smegmatis str. MC2 155 [NCBI] · taxon 246196

Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycolicibacterium Mycolicibacterium smegmatis

Genbank protein accession

YP_009605029.1 [NCBI]

Genbank nucleotide accession

NC_041971 [NCBI]

CDS location

range 30124 -> 31119
strand +

CDS

ATGGGTAGCTTTAAGCCCCTCGTCCCAGTTCGCAGCAACCGACCCCTCGAGCTTCAGCGCGGTAATCCGCTGCGCTACCGCTACACGCTGGCCGGTAATCGGGAGTTCCCACTCGGGACCACTGCGCTGCTGACTGTGGCTAACACCTACGGCCAGACCGTCGGTGCCTACGTCGGTGTTGTTGACGGCAAGTATATCGATTTCGCTGAGGCAGCGGACATCTCGGATACGTTGGCCCGCACTGACTCGTGGCAGCTGTTCGTGACGTACCCCGGCGAGACTATGCCTACCCTACTGGAGCAGGGCCAGGTCATCCGCATCGAGGCTCCATACCCCGACGCACCGCCGCAGTCGAGCGAGTTCGACGGCGTGGCCTACGAGTACCACTTCGGCACGCCTGGCCTGCTGACCGATCCCGCATGGCGGATCATGAACGGTCACCCACGCGTGTACGACAACTCGCTGCGTGGCTATCCGAACGCTGTCGCCGCTGGCACTCTGCTGACCGATCTCACGCCGTGGGCTGACGTGGCGATGTTGTGGTTTGCACCGCTGCAGACTGACGCAGTTCGGTTGACGTACAACACGATTCGTGCCCACGACAACAGCAATGGCGAGATGTGGACCGTCATTTGCTCGAACTACGACATGTCGAACTGGGCCGGGTTCCATCACAAGCAGGTGTTCGGCATCGGCGACTGGGACTCCGACACCATCTCGGTCGTAACCGGCACTGGGCCAACGACGTTCGTTAATCGCGCCAGCGCGTCGAAGGACACGCAGGACAACCAGATCTACACCGCTGAGTTCAACCCGATCACCAACACATTCACGCTCTACGTGGGCACTGACATGACTCCCGTTGTGTCGTGGACTGATTCGACCAGTGTGGTCGACCACGGCCCCGGTGAGCGCTATGTCGGGTTCGGCTTCAAGTCGACCATCTTGGATGCCGGTGTGCAGGTGTCGGACTGGATCATCGCTGACACCCCATGA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)