Protein

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Genbank accession
YP_010092405.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MADLKASSTVGGAVIWHQGNFPLFPVGDSLLYKTYKVYTEKDKPQAVDNDFVSKAQGGEYLKAVNFVEGFGFTDDNGYKIKFGKPGSTEPTVNYTASIKLQSPLALETNDNKPFIIFDPSSDLTKPKLTVMGRVIAGEVWDSNTRVFSPANPPTPTDVSLGNVTNDKQVKINTTDLQTMKGELRAPNMSSENPAIEPNQLTRYDQTVLRDADQDFGYYS
Physico‐chemical
properties
protein length:219 AA
molecular weight: 24103,64970 Da
isoelectric point:4,96468
aromaticity:0,10046
hydropathy:-0,52557

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010092405.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 63 63 0,9649
Central domain 64 208 146 0,2384
C-terminal 209 219 10 0,9078
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-63
Central
64-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage X20
[NCBI] 		2006942 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Winklervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010092405.1 [NCBI]
Genbank nucleotide accession
NC_055728 [NCBI]
CDS location
range 158772 -> 159431
strand +
CDS
ATGGCCGATTTAAAAGCTAGTTCTACGGTCGGAGGAGCAGTCATTTGGCACCAAGGTAATTTTCCTTTGTTCCCAGTTGGTGACTCTCTTCTGTACAAAACATATAAAGTTTATACCGAAAAAGACAAACCACAAGCAGTAGATAATGATTTTGTTTCTAAAGCTCAAGGTGGCGAATATCTTAAAGCCGTTAATTTTGTTGAAGGTTTTGGATTCACAGATGATAATGGCTATAAGATTAAATTCGGTAAGCCAGGTTCTACCGAGCCTACGGTAAATTACACAGCATCTATTAAACTCCAATCTCCATTAGCACTAGAAACAAACGATAATAAACCATTTATTATTTTTGACCCTAGTTCAGATTTAACTAAACCTAAATTAACTGTTATGGGTAGAGTTATCGCTGGAGAAGTTTGGGATTCTAATACAAGAGTCTTTAGTCCAGCGAACCCACCTACTCCTACAGATGTAAGTCTTGGTAATGTGACTAATGACAAACAGGTCAAGATAAATACTACTGACTTACAGACTATGAAAGGTGAGCTCAGAGCTCCTAATATGTCTAGTGAAAATCCGGCAATTGAGCCGAACCAATTAACTCGATATGACCAAACGGTTCTTCGAGATGCAGACCAAGATTTCGGCTATTACAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7a82b2a553b8a72eed182837dc1934aa2f937a98c63f778e886dd30baa27f61
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Environmental T4-family bacteriophages evolve to escape abortive infection via multiple routes in a bacterial host employing #altruistic suicide# through Type III toxin-antitoxin systems Chen,B., Akusobi,C., Fang,X. and Salmond,G.P.C. — — GenBank