Protein

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Genbank accession

YP_010092405.1 [GenBank]

Protein name

hinge connector of long tail fiber protein distal connector

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,70

TSP

Evidence RBPdetect2

Probability 0,65

Seq2Symm

C3 confidence 0,974

C3	0,974
D3	0,035
C1	0,022

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADLKASSTVGGAVIWHQGNFPLFPVGDSLLYKTYKVYTEKDKPQAVDNDFVSKAQGGEYLKAVNFVEGFGFTDDNGYKIKFGKPGSTEPTVNYTASIKLQSPLALETNDNKPFIIFDPSSDLTKPKLTVMGRVIAGEVWDSNTRVFSPANPPTPTDVSLGNVTNDKQVKINTTDLQTMKGELRAPNMSSENPAIEPNQLTRYDQTVLRDADQDFGYYS

Physico‐chemical properties

protein length:	219 AA
molecular weight:	24103,64970 Da
isoelectric point:	4,96468
aromaticity:	0,10046
hydropathy:	-0,52557

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_010092405.1

1 219 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	63	63	0,9649
Central domain	64	208	146	0,2384
C-terminal	209	219	10	0,9078

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage

Serratia phage X20 [NCBI] · taxon 2006942

Uroviricota Caudoviricetes Pantevenvirales Straboviridae Winklervirus Winklervirus xtwenty

Host

Prodigiosinella confusarubida [NCBI] · taxon 104623

Pseudomonadota Gammaproteobacteria Enterobacterales Pectobacteriaceae Prodigiosinella Prodigiosinella confusarubida

Coding sequence (CDS)

Genbank protein accession

YP_010092405.1 [NCBI]

Genbank nucleotide accession

NC_055728 [NCBI]

CDS location

range 158772 -> 159431
strand +

CDS

ATGGCCGATTTAAAAGCTAGTTCTACGGTCGGAGGAGCAGTCATTTGGCACCAAGGTAATTTTCCTTTGTTCCCAGTTGGTGACTCTCTTCTGTACAAAACATATAAAGTTTATACCGAAAAAGACAAACCACAAGCAGTAGATAATGATTTTGTTTCTAAAGCTCAAGGTGGCGAATATCTTAAAGCCGTTAATTTTGTTGAAGGTTTTGGATTCACAGATGATAATGGCTATAAGATTAAATTCGGTAAGCCAGGTTCTACCGAGCCTACGGTAAATTACACAGCATCTATTAAACTCCAATCTCCATTAGCACTAGAAACAAACGATAATAAACCATTTATTATTTTTGACCCTAGTTCAGATTTAACTAAACCTAAATTAACTGTTATGGGTAGAGTTATCGCTGGAGAAGTTTGGGATTCTAATACAAGAGTCTTTAGTCCAGCGAACCCACCTACTCCTACAGATGTAAGTCTTGGTAATGTGACTAATGACAAACAGGTCAAGATAAATACTACTGACTTACAGACTATGAAAGGTGAGCTCAGAGCTCCTAATATGTCTAGTGAAAATCCGGCAATTGAGCCGAACCAATTAACTCGATATGACCAAACGGTTCTTCGAGATGCAGACCAAGATTTCGGCTATTACAGCTAA

Genome Context

Tertiary structure

YP_010092405.1

ESMFold structure

Source ESMFold

pLDDT 61.0

Oligomeric state monomer

Download structure

Literature

Title	Authors	Date	PMID	Source
Environmental T4-family bacteriophages evolve to escape abortive infection via multiple routes in a bacterial host employing #altruistic suicide# through Type III toxin-antitoxin systems	Chen,B., Akusobi,C., Fang,X. and Salmond,G.P.C.	—	28620370	GenBank