Phage RBP Database

Genbank accession

WWD14705.1 [GenBank]

Protein name

straight fiber tail protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,46

Seq2Symm

C1 confidence 0,922

C1	0,922
C3	0,626
C2	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MISNNAPAKMVLNSVVTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNITRRDFTGVDTFSVTINNLKPTATYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITSARCESEPVDVGVGAPIVYLNTTGEADYCTIELKNNSNANNPWVKYYVGALMPTIMFGGVPVGSYKVRISGQVSLPDGVTIDSSGYYEYPTVFEVKYNFVSPTAPVNIVFKAARIADGKERYDLRVQWDWNRGTGANVREFVLSYIDSTEFAKTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPNIQDTTDSTAQTFILNEDTPLDNNFVNETGIEVNYAYIKGKIKEGTTWKQTFLIDAATGAVNIGLLDAEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDAKSGIWMGMDNTNAKPKLDIGNATQYIRYDGDTLRISNKVVIGTPNGDVDLGTGMQGKQTVFVYKLASSLPAKPLEQDYPPPSWSKTPPNRTDMTQNIYVTTGTLDPVTNKLLVGTSWSDVVQWSGTEGTIGHDGQRGPGMYSLGISGLGGWNDSQANAFFQNNFGSPPVKYDVLTEFNSSAPQSAFTRQWNGSSWADPAMVLHGNMIVNGTVTASKIVANDAFLSQIGVNVIYDRNAALSNNPEASYRMKIDLATGYIHIR

Physico‐chemical properties

protein length:	685 AA
molecular weight:	74861,24940 Da
isoelectric point:	5,61248
aromaticity:	0,10365
hydropathy:	-0,25971

Domain architecture

WWD14705.1

1 685 aa

STR 10–97 · STR 103–197 · STR 212–335 · STR 350–664 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR057550
STR

IPR057550 IPR057551 IPR057552 IPR057549

IPR057551
STR

IPR057551

WWD14705.1

1685 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR057550	STR	DC_0866	10	97	InterPro cluster	Straight fiber protein PB4, first Fn3-like domain	N-terminal	Medium	Text match	229 proteins / 229 hits
IPR057551	STR	DC_0197	103	197	InterPro cluster	Straight fiber protein PB4, second Fn3-like domain	N-terminal	Medium	Text match	230 proteins / 230 hits
IPR057551	STR	DC_0197	104	196	InterPro cluster	Straight fiber protein PB4, second Fn3-like domain	N-terminal	Medium	Text match	230 proteins / 230 hits
IPR057552	STR	DC_0003	212	335	InterPro cluster	Straight fiber protein PB4, third Fn3-like domain	Central	High	Text match	998 proteins / 1603 hits
IPR057549	STR	DC_0351	350	664	InterPro cluster	Straight fiber protein PB4, spike domain	C-terminal	High	Text match	247 proteins / 290 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WWD14705.1

1 685 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	410	410	0,8818
Central domain	411	651	242	0,1617
C-terminal	652	685	33	0,8852

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage DevonBitter [NCBI] · taxon 3098257

Uroviricota Caudoviricetes Demerecviridae Sugarlandvirus Klebsiella phage DevonBitter

Host

Klebsiella pneumoniae [NCBI] · taxon 573

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae

Genbank protein accession

WWD14705.1 [NCBI]

Genbank nucleotide accession

OR896848 [NCBI]

CDS location

range 105818 -> 107875
strand +

CDS

ATGATTTCAAATAATGCACCAGCTAAAATGGTCCTAAATAGCGTCGTAACTGGATATACATTGGCGTATATCCAGCACTCTATCTACTCTGATTACGATGTTATAGGCAGATCTTTTTGGCTTAAAGAAGGTAGCAATATTACTCGTAGAGATTTTACTGGAGTTGATACCTTCTCTGTAACTATTAATAATCTAAAACCTACAGCAACGTATGAGGTTCAGGGTGCATTTTATGATTCTATAATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATCTGTCTGACAAACAAACTTTTAAAATGAAGTCAGCACCTAGAATCACGAGTGCTAGATGTGAATCAGAGCCGGTAGACGTAGGTGTTGGGGCACCAATAGTTTATCTAAATACTACGGGAGAAGCTGATTATTGTACTATAGAATTAAAAAATAATTCTAATGCTAATAATCCGTGGGTTAAATATTATGTTGGGGCATTAATGCCAACTATTATGTTTGGTGGTGTGCCAGTTGGGTCTTATAAGGTAAGAATTTCTGGACAAGTATCTCTACCAGATGGGGTAACTATTGATTCATCTGGCTACTATGAGTACCCTACTGTTTTTGAAGTTAAATATAACTTTGTATCACCTACAGCTCCAGTTAATATTGTATTTAAAGCTGCGCGTATAGCCGATGGTAAAGAACGCTATGATTTACGTGTACAATGGGATTGGAACAGGGGCACAGGTGCTAACGTTCGTGAATTCGTTCTATCCTATATAGATTCAACAGAATTTGCTAAAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGGGCTGCTCAGTCGGCAACAATTATATCATTCCCCTGGAAGGTAGAACATAAATTTAAGGTTTCATCTATTGCTTGGGGACCAAATATACAGGATACTACTGATTCCACAGCACAGACATTTATACTAAATGAAGATACCCCACTTGATAATAATTTTGTTAACGAAACGGGTATAGAAGTTAACTATGCATACATTAAGGGTAAGATCAAAGAGGGCACAACCTGGAAACAAACCTTCCTAATAGATGCCGCCACTGGTGCTGTTAATATAGGTCTTCTAGACGCGGAAGGAAAAGCGCCAATATCTTTTGATCCTATTAAAAAGATTGTTAACGTTGATGGTAGTGTAATCACTAAAACTATTAATGCTGCTAACTTTGTCATGACTAACCTAACTGGTCAAGATAACCCGGCAATATATACACAAGGTAAAACTTGGGGAGATGCAAAGTCTGGTATTTGGATGGGTATGGATAATACCAATGCTAAACCTAAATTAGACATCGGTAACGCTACACAGTATATACGTTACGATGGCGATACATTGAGAATTTCTAATAAAGTTGTAATTGGTACACCAAATGGCGATGTAGATCTTGGTACAGGTATGCAAGGTAAACAAACAGTATTCGTTTATAAATTAGCATCCTCACTTCCTGCAAAACCACTAGAGCAAGATTATCCACCACCTAGTTGGTCGAAGACCCCACCTAACCGTACGGATATGACTCAAAATATCTATGTGACTACAGGTACACTTGATCCAGTAACTAATAAATTACTTGTAGGTACTAGCTGGTCAGATGTAGTTCAGTGGAGTGGTACTGAAGGTACAATTGGACACGATGGACAACGTGGTCCTGGGATGTACTCTTTAGGTATTTCTGGTCTTGGGGGTTGGAATGACAGCCAGGCTAATGCCTTCTTTCAGAATAATTTTGGTAGTCCTCCAGTTAAATATGACGTGTTGACTGAGTTTAATAGTAGTGCTCCACAATCTGCATTTACTCGTCAATGGAATGGCTCCAGTTGGGCTGACCCTGCGATGGTTTTACACGGCAATATGATAGTTAACGGTACGGTAACCGCTAGTAAGATTGTGGCGAATGATGCCTTCTTATCTCAGATAGGTGTTAACGTTATCTATGATAGAAATGCAGCGTTATCAAACAATCCGGAAGCCTCTTACAGAATGAAGATAGACCTAGCTACTGGGTATATCCATATAAGGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)