Protein

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Genbank accession
ALA06997.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Seq2Symm
C3 confidence 0,679
C3 0,679
C2 0,067
C1 0,028
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MIKVYDGAKELPYDYYFNYSDSSQAYDKRARVIKGKLVIEDYKETNPVDFMTYWSGRPDITVIESKQVGYMMNIFNISNFSYSEQMDSGNVIYEVELIRRMAPKQINSVTFKDITQGTLADLEATYAMIVSVDDIQVNGYTYFTDNKYVLLSNVKKTEYPNEVGRCRVVSGTSFYVTIGGGANVRFIQGHGGVPFPNKIRVGHESDQKNQFTGRVMLVD
Physico‐chemical
properties
protein length:219 AA
molecular weight: 24964,93780 Da
isoelectric point:5,77617
aromaticity:0,12785
hydropathy:-0,36758

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
ALA06997.1
1 219 aa
Domain Start End Length (AA) Confidence
N-terminal 1 109 109 0,8263
Central domain 110 208 100 0,0407
C-terminal 209 219 10 0,9329
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Lactococcus phage GE1 [NCBI] · taxon 1698369
Uroviricota Caudoviricetes Chertseyvirus Chertseyvirus GE1
Host
Lactococcus garvieae [NCBI] · taxon 1363
Bacillota Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus garvieae

Coding sequence (CDS)

Genbank protein accession
ALA06997.1 [NCBI]
Genbank nucleotide accession
KT339177 [NCBI]
CDS location
range 22100 -> 22759
strand +
CDS
ATGATAAAGGTGTACGACGGAGCAAAAGAATTACCTTATGACTATTATTTTAATTATTCTGATAGTTCACAGGCTTATGACAAGAGGGCTAGAGTTATCAAAGGTAAACTAGTTATAGAGGATTACAAAGAAACTAATCCCGTTGATTTCATGACATATTGGAGTGGCAGACCCGACATCACAGTAATTGAGAGCAAGCAAGTTGGTTACATGATGAATATTTTTAATATATCTAATTTTAGTTATAGCGAGCAAATGGATAGCGGGAATGTCATTTATGAGGTGGAATTAATAAGAAGAATGGCTCCTAAGCAGATCAACAGCGTTACTTTCAAAGATATAACACAAGGCACTTTAGCTGACTTAGAAGCGACTTATGCAATGATTGTTAGTGTTGATGATATACAAGTTAACGGGTACACATATTTCACTGACAACAAATATGTACTTTTATCAAATGTCAAGAAAACAGAGTACCCTAATGAGGTAGGCAGATGTAGAGTAGTTAGCGGAACAAGTTTTTATGTAACTATTGGTGGTGGCGCAAACGTTAGGTTTATACAAGGTCACGGCGGTGTTCCTTTTCCTAATAAAATAAGGGTAGGTCATGAGTCAGATCAAAAAAATCAATTCACAGGAAGGGTTATGTTGGTGGATTAA

Genome Context

Tertiary structure

ALA06997.1
ESMFold structure
Source ESMFold
pLDDT 45.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A new virulent phage infecting Lactococcus garvieae, with homology to Lactococcus lactis phages Eraclio,G., Tremblay,D.M., Lacelle-Cote,A., Labrie,S.J., Fortina,M.G. and Moineau,S. 2015 26407890 GenBank