Protein

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Genbank accession
ALA06997.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MIKVYDGAKELPYDYYFNYSDSSQAYDKRARVIKGKLVIEDYKETNPVDFMTYWSGRPDITVIESKQVGYMMNIFNISNFSYSEQMDSGNVIYEVELIRRMAPKQINSVTFKDITQGTLADLEATYAMIVSVDDIQVNGYTYFTDNKYVLLSNVKKTEYPNEVGRCRVVSGTSFYVTIGGGANVRFIQGHGGVPFPNKIRVGHESDQKNQFTGRVMLVD
Physico‐chemical
properties
protein length:219 AA
molecular weight: 24964,93780 Da
isoelectric point:5,77617
aromaticity:0,12785
hydropathy:-0,36758

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage GE1
[NCBI] 		1698369 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALA06997.1 [NCBI]
Genbank nucleotide accession
KT339177 [NCBI]
CDS location
range 22100 -> 22759
strand +
CDS
ATGATAAAGGTGTACGACGGAGCAAAAGAATTACCTTATGACTATTATTTTAATTATTCTGATAGTTCACAGGCTTATGACAAGAGGGCTAGAGTTATCAAAGGTAAACTAGTTATAGAGGATTACAAAGAAACTAATCCCGTTGATTTCATGACATATTGGAGTGGCAGACCCGACATCACAGTAATTGAGAGCAAGCAAGTTGGTTACATGATGAATATTTTTAATATATCTAATTTTAGTTATAGCGAGCAAATGGATAGCGGGAATGTCATTTATGAGGTGGAATTAATAAGAAGAATGGCTCCTAAGCAGATCAACAGCGTTACTTTCAAAGATATAACACAAGGCACTTTAGCTGACTTAGAAGCGACTTATGCAATGATTGTTAGTGTTGATGATATACAAGTTAACGGGTACACATATTTCACTGACAACAAATATGTACTTTTATCAAATGTCAAGAAAACAGAGTACCCTAATGAGGTAGGCAGATGTAGAGTAGTTAGCGGAACAAGTTTTTATGTAACTATTGGTGGTGGCGCAAACGTTAGGTTTATACAAGGTCACGGCGGTGTTCCTTTTCCTAATAAAATAAGGGTAGGTCATGAGTCAGATCAAAAAAATCAATTCACAGGAAGGGTTATGTTGGTGGATTAA

Tertiary structure

PDB ID
f1e2106506ff2d424f5d7f19cafdc89320fd4068a82d3d68ceb8d1efa6ac8338
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4518
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A new virulent phage infecting Lactococcus garvieae, with homology to Lactococcus lactis phages Eraclio,G., Tremblay,D.M., Lacelle-Cote,A., Labrie,S.J., Fortina,M.G. and Moineau,S. 2015 26407890 GenBank