Protein

View in Explore
Genbank accession
QHB48101.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTYALDGTKKDFTIPFEYLARKFVVVTLIGATRRELILNTEYRFTTNTTITTNKAWGPADNFDLIEIRRLTSATERLVDFADGSILRAYDLNISQVQSLHIAEEARDLTADTIGVNNDGDLDARARKIVNLADGVNDGDAVNMRQQRQWAGSALNSANASAASAQASEASRQASLAQAQSSAASAGQSSTYATNSQNSASNSQTSRLASEAARDASITARDLSQAWSSKAEDQVVASGLYSSYHYSRKSAASATASQTSATNSANSASFSTTEANRATTQADRAKTEADKLGNMNALGGAIREVNTTGKKVEINTGWEWNSDVIAVDGFRSRSSSSIDFNAQLNGRLGASFTGSLSVGGTTSLQNTTVAGLTVNSDAQFKNGNVQVFATNSSSNSHVWFYGPDGTSRGILYAGTDKAVRMQAGEVVCATFSPDGGTTLNNISAGNVTARATAYTQGGIENNGRVASYRNGVGANASMYANCHFMAQTDDGTAPAYGFHRGGSYALALWLNGNQLHMMDSSGTNREILNNTNLGSWMVSVGEQGVGSYAFCRSGVTATYGVDVAGGNLTYGSTGANGGSVPGTWRSRGWAGGGNHTLFQRIA
Physico‐chemical
properties
protein length:609 AA
molecular weight: 64042,16760 Da
isoelectric point:7,06437
aromaticity:0,07553
hydropathy:-0,38062

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil
QHB48101.1
1 609
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage CHF33
[NCBI] 		2686376 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB48101.1 [NCBI]
Genbank nucleotide accession
MN729599 [NCBI]
CDS location
range 35349 -> 37178
strand +
CDS
ATGGCTACTACACCAAAGACGGTGCGGACCTACGCTCTCGATGGCACCAAGAAAGACTTCACGATCCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTGGTCACCTTGATCGGTGCAACTCGACGTGAGCTGATCCTGAACACCGAGTACCGCTTCACTACCAACACGACCATCACCACGAATAAGGCATGGGGACCGGCTGATAACTTCGACCTGATCGAGATTCGCCGACTGACCTCTGCAACTGAGCGTCTGGTGGACTTCGCTGATGGTTCGATCCTTCGGGCCTACGACCTGAACATCTCGCAGGTGCAATCGCTGCACATCGCTGAGGAAGCCCGTGACTTGACCGCTGACACAATCGGCGTGAACAACGATGGTGACCTCGATGCCCGTGCCCGTAAGATCGTCAACCTCGCCGATGGCGTGAACGATGGTGATGCCGTAAACATGCGTCAACAGCGGCAATGGGCAGGCTCTGCGTTGAACTCTGCGAACGCCAGTGCTGCCTCTGCGCAAGCCTCTGAGGCGTCCCGTCAGGCTTCCTTGGCGCAGGCCCAATCGAGCGCTGCAAGTGCTGGTCAATCGAGCACCTATGCGACCAACTCTCAGAACTCTGCAAGCAACTCTCAGACTTCCCGTCTGGCCTCTGAGGCTGCCCGTGACGCTTCCATCACCGCCCGTGACTTGTCCCAAGCGTGGTCCTCGAAGGCTGAGGATCAGGTCGTTGCATCCGGCCTCTATTCGTCCTACCACTACAGCCGCAAGTCGGCAGCGAGTGCCACGGCAAGTCAGACCTCTGCGACCAACTCTGCGAACTCTGCGAGTTTCTCCACGACCGAGGCCAACCGGGCAACCACTCAGGCCGACCGTGCGAAGACCGAGGCTGACAAGCTGGGCAACATGAACGCGCTCGGTGGGGCGATCCGTGAAGTAAACACGACTGGCAAGAAGGTAGAGATCAACACCGGCTGGGAGTGGAATTCTGACGTAATTGCGGTAGACGGGTTCCGCTCAAGGAGTTCGTCCTCCATCGACTTCAATGCCCAGCTCAACGGGAGACTTGGCGCTTCATTCACTGGTAGCCTTTCAGTTGGAGGTACTACCAGCCTACAGAACACCACTGTAGCCGGTCTAACAGTGAACTCTGATGCCCAGTTCAAGAATGGTAACGTGCAGGTATTTGCCACGAACTCATCGTCTAACTCCCATGTCTGGTTCTACGGCCCTGACGGTACTTCCCGAGGAATTCTCTATGCTGGCACAGACAAAGCGGTAAGGATGCAAGCAGGGGAGGTAGTGTGCGCGACCTTCTCTCCAGATGGAGGGACCACACTAAACAACATATCTGCTGGTAATGTTACGGCCCGTGCTACTGCATATACTCAAGGTGGGATTGAGAATAACGGGCGTGTCGCGTCCTACCGCAATGGTGTGGGCGCAAATGCTTCCATGTATGCCAACTGCCACTTCATGGCTCAGACCGACGATGGCACTGCCCCAGCCTATGGGTTCCACCGTGGTGGCTCGTATGCTCTGGCTCTTTGGCTGAACGGAAATCAGTTGCACATGATGGACTCAAGTGGCACTAACCGAGAAATCCTGAACAACACGAACTTAGGCTCTTGGATGGTCAGCGTAGGAGAGCAGGGTGTCGGCTCGTATGCGTTCTGCCGTTCCGGCGTGACTGCTACCTACGGCGTTGACGTTGCTGGTGGAAACCTGACCTACGGCTCGACTGGCGCGAACGGTGGCTCTGTCCCCGGAACTTGGCGTTCCCGTGGCTGGGCTGGCGGTGGTAACCATACCCTGTTCCAGCGTATCGCTTAA

Tertiary structure

PDB ID
a0c7f90cb5eacc2cd87130d2d21cffa7590492a2129f7b5b7e37a9ded57a5aa9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Bacteriophages against Pseudomonas Syringae pv. Actinidiae with Potential Use as Natural Antimicrobials in Kiwifruit Plants Flores,O., Retamales,J., Nunez,M., Leon,M., Salinas,P., Besoain,X., Yanez,C. and Bastias,R. 2020 — GenBank