Protein

View in Explore
Genbank accession
QHR68064.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRNPERGQEINIPLLYGDGRSNKTLDWTTRLPENMLAVARQVKGGNGYMRIMPGIDKVADVDGISRGSEWNTVKMGPSRVMGGKLYLLGSPLADVSGVDRTPMAHSRDRIGIVTDNRLLMVGYDGTVTNFSNWTGEDAPIYSWGDINDVCHLRQRFIFSTKGTDTFWISDLEDETKPDKIAPAYRAESMPDGIVAIRSWHDYVVCFGSASIEFFGLTGDDQNVYANQPSYTVQAGTLGRETVCAYLDTFAFITSQFSGEYTIAIMQPGAAPTEIASAEVKKMLAGYTVEQLQAARLESLSYETHKLLIVHLPDKTLVYDHPVSQAQGVPVWSFLKTGILSLKPWRAIDVMNEGNRITVGDKTGKWLGALNNTHSAQYGEDQEIVLYTPILWAENAILADFRIDASTGGGSTTSRIWLSATEDGINYGQERTIAYNTPYRWLQNVILPVVGRVRSAIGFKLRTVGATPATLSRARVRVT
Physico‐chemical
properties
protein length:478 AA
molecular weight: 52796,17110 Da
isoelectric point:5,88809
aromaticity:0,09205
hydropathy:-0,22427

Domains

Domains [InterPro]
IPR021098
STR
11–477
IPR021098
QHR68064.1
1 478
Architecture
STR
STR 11-477 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR68064.1
1 478
Domain Start End Length (AA) Confidence
N-terminal 1 62 62 0,9868
Central domain 63 261 200 0,0260
C-terminal 262 478 216 0,3994
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-62
Central
63-261
C-terminal
262-478

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage sortregn
[NCBI] 		2696446 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR68064.1 [NCBI]
Genbank nucleotide accession
MN850588 [NCBI]
CDS location
range 26044 -> 27480
strand +
CDS
ATGAGGAACCCAGAGCGCGGGCAGGAGATTAACATCCCGTTACTGTACGGTGACGGGCGCAGTAATAAGACGCTGGACTGGACGACGCGACTCCCGGAGAACATGCTGGCGGTCGCCCGACAGGTCAAAGGCGGCAACGGCTACATGCGGATCATGCCGGGGATCGATAAGGTCGCCGACGTGGACGGGATCAGCCGTGGCTCGGAATGGAACACGGTCAAAATGGGACCTTCCCGCGTAATGGGTGGCAAGCTGTACCTCTTAGGCTCGCCGCTGGCGGACGTGTCCGGCGTGGACCGTACTCCTATGGCGCATAGCCGCGACAGGATCGGCATTGTGACCGATAACCGCCTGTTAATGGTCGGCTATGACGGGACTGTGACGAACTTTTCCAACTGGACGGGGGAGGACGCTCCGATCTACTCGTGGGGCGACATTAACGACGTTTGCCACCTCCGCCAGCGCTTCATCTTCTCCACGAAGGGGACGGACACCTTTTGGATCTCCGACCTGGAGGACGAGACGAAGCCGGACAAGATCGCCCCGGCGTATCGCGCTGAATCCATGCCGGACGGCATCGTGGCGATCCGCTCGTGGCATGACTATGTTGTGTGCTTCGGTAGCGCCTCGATCGAGTTCTTCGGCCTGACCGGGGACGACCAGAACGTCTACGCGAACCAGCCCTCCTACACCGTCCAGGCCGGAACGCTGGGACGTGAAACCGTTTGCGCCTATCTGGACACGTTCGCGTTTATTACGTCCCAATTCTCCGGGGAGTACACGATCGCCATCATGCAGCCCGGCGCGGCTCCGACGGAGATCGCCAGCGCGGAAGTTAAGAAGATGCTCGCCGGGTACACCGTGGAGCAGCTACAGGCGGCGCGACTGGAGTCACTCAGCTATGAAACGCATAAATTGCTTATTGTCCACCTACCGGACAAAACGCTGGTTTACGATCACCCCGTTAGCCAGGCCCAGGGCGTCCCGGTCTGGTCATTCCTCAAGACGGGGATCCTCTCGCTTAAGCCGTGGCGGGCGATTGACGTCATGAACGAGGGCAACCGGATCACCGTCGGCGACAAGACGGGGAAATGGCTCGGAGCGCTGAACAATACCCACTCCGCGCAGTACGGCGAGGACCAGGAGATCGTCCTGTACACGCCGATCCTGTGGGCTGAAAATGCGATCCTCGCTGACTTTAGGATCGACGCTTCGACCGGGGGCGGCTCTACCACTTCCCGGATCTGGCTCTCCGCCACCGAGGACGGGATCAACTACGGGCAGGAGCGAACGATCGCTTATAACACGCCTTACCGCTGGCTACAGAACGTTATCTTGCCCGTTGTGGGCCGCGTCCGTTCCGCCATCGGCTTTAAACTTCGCACCGTTGGCGCGACCCCGGCGACTCTCTCGCGGGCGCGTGTCCGTGTGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0f02c7986d63c0e6c68a26a857a70711403b4ba82bd13ebce48e4076ec578e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8581
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank