Protein

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Genbank accession
URG13942.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNLYSQWFSVLRAGGDYKTMHLYPGTGGDTFDINFAGGYIDRAHVKALVSTGDVVTLQFSSASRVRTSRPILVGETVLIYRDTPKVVPLSQFSDGALLTGDNLDRNAKQAVFVAAEMLDRFDTFGSSLETSVEQVSEALQVAAAALAKAAAADEKASSVLGVAEAAKVESSSAITKSMQAYNSAMGEKGYRLSWNGFSLVGTFEYGCVVRTPTDAVVDLSTGKPYKYTGNIPADGYVVAEGDKPNSMWSDLNVYSTARELREGYTKSQYARVGSFAVGGVRVVAGVSAVVHSDGLYYSPISGSRDILPNSAPDSGMVCVGLLNGSDVDSLANWVVGQNTLINEALRSKSIRGGGVVTVPAGDFYSAETIQLLDFVQIRGVSRRRSRISNAPGFTGPVLVNATKGTLGSSNVPEYLSYSGISQCTVFATDTVRVGVYARHATNESDFSRLTVQGFSEVNLYVLGCFYCDFSGGVSRDALKYGMVFGRKLYSEGGLNEVNACALNNIRSNYSGMDNTYDPAVDSLNGAGITIWSANSCAFDYVGAENSYGAGLVIRKGVNSTLQTVYIEANGRSAKAVDKIGLVVVNADFPQLIISNLNLTRNQRVYLDSGSIVDIGNLYSESFDSGLFKGTGKVSLGSGLYVNRLIAADVALVVNKTLVMHGTAAGVSMSSYSSLDNSWMVAGGVVSNVRIVMIPSVTLTTTDPILIGIQGGSQEVNFGTSFTAGVPIERVINQPTPAGMYRLRHRSNSLPAASSGLTAVFAVGVYCINGAPIYNSAIGG
Physico‐chemical
properties
protein length:779 AA
molecular weight: 82360,76820 Da
isoelectric point:5,99341
aromaticity:0,08858
hydropathy:0,07009

Domains

Domains [InterPro]
DC_1510
STR
5–453
DC_1510
IPR005604
ATT
29–120
IPR005604
URG13942.1
1 779
Architecture
STR
ATT
STR
STR 5-28 | ATT 29-120 | STR 121-453 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG13942.1
1 779
Domain Start End Length (AA) Confidence
N-terminal 1 337 337 0,9970
Central domain 338 642 306 0,9872
C-terminal 643 779 136 0,9875
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-337
Central
338-642
C-terminal
643-779

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AHPMCC7
[NCBI] 		2945923 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13942.1 [NCBI]
Genbank nucleotide accession
ON365567.2 [NCBI]
CDS location
range 22049 -> 24388
strand +
CDS
ATGAACCTGTACTCACAGTGGTTTTCCGTACTGCGCGCCGGCGGTGACTACAAGACCATGCACCTATACCCCGGAACAGGTGGCGACACATTCGATATAAATTTCGCAGGGGGTTACATAGACCGTGCGCATGTAAAGGCCCTCGTGTCTACAGGGGACGTAGTTACCCTGCAATTCAGCTCTGCGAGTCGGGTCCGCACATCAAGACCGATACTGGTTGGTGAGACTGTACTTATTTACAGGGACACCCCGAAAGTAGTACCCCTTTCCCAGTTCTCAGATGGTGCGCTGCTCACAGGTGATAACTTAGACAGAAATGCTAAGCAGGCTGTATTTGTGGCTGCTGAAATGTTGGACCGTTTTGACACGTTCGGGTCCAGTTTGGAAACTTCTGTTGAGCAGGTTTCCGAGGCGTTGCAGGTAGCGGCAGCTGCTCTTGCAAAGGCAGCGGCTGCTGATGAAAAGGCAAGCAGCGTCCTTGGTGTGGCAGAGGCTGCAAAGGTTGAATCATCATCTGCAATCACTAAATCCATGCAGGCCTACAACTCGGCTATGGGCGAGAAGGGGTATCGGTTATCGTGGAACGGGTTTAGTCTGGTCGGGACATTTGAGTACGGTTGCGTAGTGCGCACGCCAACAGATGCTGTAGTTGACCTGTCAACAGGAAAGCCCTATAAATACACTGGGAATATACCTGCGGATGGGTACGTTGTAGCAGAAGGTGACAAGCCTAATTCTATGTGGTCTGACCTTAACGTGTACTCCACAGCCCGCGAACTTCGTGAGGGGTATACAAAGTCACAGTACGCAAGAGTCGGCTCTTTCGCAGTTGGTGGGGTTCGCGTTGTTGCAGGTGTCTCAGCAGTTGTGCATAGCGATGGGTTATATTACTCGCCTATCTCTGGTAGTAGGGATATACTGCCGAATAGTGCACCAGACTCCGGTATGGTGTGCGTAGGTCTGCTTAATGGGTCAGATGTCGATTCACTAGCTAACTGGGTAGTAGGGCAAAACACGCTTATAAACGAGGCGCTCAGGAGCAAGTCAATAAGGGGCGGTGGTGTAGTAACAGTTCCCGCAGGAGACTTCTACTCTGCTGAGACAATCCAACTACTTGATTTTGTTCAAATCCGGGGCGTATCTCGCAGGCGCTCGCGCATATCCAACGCCCCGGGATTCACAGGGCCGGTTCTTGTAAATGCCACAAAAGGAACACTTGGGTCCAGCAACGTTCCAGAGTACCTGTCGTACTCTGGAATAAGTCAATGCACTGTGTTTGCAACCGACACAGTGCGGGTTGGTGTTTATGCTAGGCACGCCACTAATGAGTCGGATTTCTCTAGGCTAACAGTGCAGGGCTTCTCAGAGGTGAACCTATACGTACTTGGGTGCTTCTACTGCGACTTCTCTGGGGGTGTATCTCGTGATGCGCTTAAGTACGGTATGGTTTTCGGACGCAAGCTGTACTCAGAGGGCGGGTTGAATGAAGTAAACGCGTGTGCATTGAACAATATACGCTCTAACTACTCGGGTATGGATAACACGTACGACCCTGCTGTTGATTCCTTGAACGGTGCTGGTATCACTATATGGAGCGCAAACTCCTGCGCTTTCGATTACGTAGGCGCAGAGAACTCATACGGTGCTGGTCTTGTTATCCGAAAGGGTGTTAACAGCACTCTCCAAACAGTGTACATTGAGGCAAATGGAAGAAGCGCCAAGGCAGTGGATAAAATTGGCCTTGTTGTTGTTAACGCTGACTTTCCGCAACTAATCATATCAAACCTTAACCTAACACGAAACCAGCGCGTGTACTTGGATTCCGGTTCTATTGTTGATATCGGTAACCTGTACTCTGAGTCGTTCGATTCCGGTCTGTTCAAGGGTACTGGTAAGGTATCTCTCGGCTCCGGGCTGTACGTCAACCGTCTTATAGCAGCTGATGTTGCACTAGTTGTTAATAAGACGCTGGTAATGCACGGCACTGCCGCTGGCGTTAGTATGTCTAGCTACAGCTCACTTGATAACTCGTGGATGGTTGCTGGTGGTGTCGTGTCGAACGTTAGGATTGTAATGATTCCGTCGGTGACACTCACAACAACAGACCCAATCTTAATTGGTATTCAAGGCGGCTCGCAGGAGGTCAATTTCGGGACATCCTTTACTGCTGGTGTTCCTATCGAGCGTGTAATAAACCAACCAACACCAGCAGGAATGTATAGGTTGCGCCACAGGTCTAACTCACTTCCAGCAGCAAGTTCAGGGCTTACTGCTGTGTTTGCAGTTGGGGTATACTGTATAAATGGGGCGCCTATTTATAACTCGGCTATCGGAGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
32bf46e47abe64863a42d23dd8d8a1c22c6ac81783b6bf1959b2157b39b14865
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila-infecting bacteriophage AHPMCC7 Ghosh,S. and Ghosh,K. 2023-11 — GenBank