Protein

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Genbank accession
UWJ04108.1 [GenBank]
Protein name
tail tube B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,80
Seq2Symm
C6 confidence 0,109
C6 0,109
C3 0,083
C10-C17 0,017
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MARVAAQLSNFTAGELSPRLDGRNDLAKYSAGCATVENMVIYPHGAAARRPGTTYVAEVRDSSKSTRLIPFEFSTTQTYILEFSDQKIRFYRDNGQILSSGSPYEITSPYLEAELFDIKFAQSADIMYITHPSHKTRKLSRTGHTSWTLAEVDFTNGPFLDSNITSTTLTPSAAGTGSRTITASAVTGINGGSGFLTTDVGRQIHFNDGYGTITARTNTTVVTVNVTTAFANTNAITNWFLGAFSDTTGHPACVTFFEQRLVFAATLNNPQTVYLSKSGDYENMDANIGGTVADDDAIIYTIASNQVNAIRFLASTRTLIIGTAGGEFAVTGGGDNNAITPTNIMIKKQSNHGAANVDGISVGNATLFLQRAKRKIRELAYNFDVDGYTAPDLTILAEHITEGGIVEMAYQEEPLAIIWCVRGDGELVALTYQREQEVVAWHRHVFGGAFGTGKAVCESVAVIPTEDSEYELYMIIKRTINGATKRYVEYLNTFDFTETDNTTFNFLDSQLSYSGATSTLNGDISATATTVIVASGTDFTSSGTIKIGGEIITYTGKSTNNLTGCTRGQNITTAIAHTSGATVKQVVNSVSGLNHLEGQVVSILADGATHPTKTVSSNAITLDRFANKIKVGLGYTSLLKTMRIDAGSQNGTSQAKTKRIYEVTARLYESVGVEVGPDLNNMERVPFRTSANPMDQGIPPFTGDKEVEFRGDYDTDGFMIVRQTQPLPLTILSLYPRLVTNDG
Physico‐chemical
properties
protein length:743 AA
molecular weight: 80162,62200 Da
isoelectric point:5,43025
aromaticity:0,08614
hydropathy:-0,17066

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UWJ04108.1
1 743 aa
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,8786
Central domain 175 373 200 0,0912
C-terminal 374 743 369 0,3225
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pelagibacter phage Skadi-7 EXVC107P [NCBI] · taxon 2971105
Uroviricota Caudoviricetes Pelagibacter phage Skadi-7 EXVC107P
Host
Candidatus Pelagibacter ubique HTCC1062 [NCBI] · taxon 335992
Pseudomonadota Alphaproteobacteria Candidatus Pelagibacterales Candidatus Pelagibacteraceae Candidatus Pelagibacter Candidatus Pelagibacter communis

Coding sequence (CDS)

Genbank protein accession
UWJ04108.1 [NCBI]
Genbank nucleotide accession
OP131300 [NCBI]
CDS location
range 29963 -> 32194
strand -
CDS
ATGGCTAGAGTAGCTGCACAACTTTCAAACTTTACAGCGGGTGAGTTATCACCAAGATTAGATGGTAGAAATGATTTAGCAAAATATTCTGCTGGATGTGCAACTGTAGAAAATATGGTTATCTATCCTCATGGTGCGGCAGCTCGTAGACCCGGAACAACTTATGTTGCAGAAGTAAGAGATAGCTCAAAATCTACAAGACTTATTCCTTTTGAATTTTCAACTACACAAACTTATATACTAGAATTTAGCGATCAAAAAATTAGATTCTACAGAGACAATGGTCAAATATTATCTAGTGGTTCACCTTATGAAATTACATCACCTTATTTAGAAGCAGAATTGTTTGATATTAAATTTGCACAATCTGCTGACATTATGTACATCACACACCCTAGCCACAAAACTAGAAAATTATCTCGTACAGGTCATACATCTTGGACATTAGCAGAAGTAGATTTTACTAATGGACCATTTTTAGATTCAAACATTACCTCAACAACACTAACACCTTCTGCTGCAGGAACAGGATCAAGAACTATTACAGCTTCTGCGGTTACAGGTATCAATGGCGGTTCTGGATTTTTAACAACAGATGTAGGTAGACAAATACATTTTAATGATGGTTATGGTACGATTACTGCAAGAACTAATACTACAGTTGTTACAGTAAATGTAACTACAGCTTTTGCAAATACTAATGCTATTACTAATTGGTTTCTTGGTGCTTTTTCTGACACTACTGGTCATCCTGCTTGTGTAACTTTTTTTGAACAACGATTGGTATTTGCCGCAACACTTAACAATCCACAAACAGTTTATCTTTCTAAATCTGGTGATTATGAAAACATGGATGCAAACATTGGTGGTACTGTAGCAGATGATGATGCTATTATTTATACAATCGCTTCTAACCAAGTTAATGCAATTAGATTTCTAGCATCAACTAGAACTTTAATTATAGGTACAGCAGGTGGTGAATTTGCAGTTACTGGTGGTGGAGATAATAATGCCATTACCCCTACTAACATTATGATTAAAAAACAATCTAACCATGGTGCAGCAAATGTAGATGGTATATCTGTAGGTAACGCAACATTATTTTTACAAAGAGCAAAAAGAAAAATTAGAGAACTAGCTTATAACTTTGACGTAGATGGTTATACAGCACCCGATCTTACCATCCTTGCCGAACACATTACTGAAGGAGGTATTGTAGAGATGGCATATCAAGAGGAACCTTTAGCAATTATTTGGTGCGTTAGAGGAGATGGTGAATTAGTTGCACTTACCTATCAAAGAGAACAAGAAGTAGTTGCTTGGCATAGACATGTTTTTGGCGGAGCATTTGGAACTGGTAAAGCAGTATGTGAATCAGTTGCAGTTATACCAACTGAAGATAGTGAGTATGAACTATATATGATTATTAAAAGAACTATTAATGGTGCTACAAAAAGATATGTAGAATATCTAAACACATTTGATTTTACAGAAACAGATAACACTACATTTAATTTTTTAGATTCTCAACTTTCTTACAGCGGTGCAACATCAACATTAAATGGCGATATTTCTGCAACAGCTACAACAGTTATTGTGGCATCTGGAACAGATTTTACATCATCTGGTACAATAAAAATTGGTGGAGAAATAATTACTTACACAGGTAAATCTACAAATAATTTAACTGGATGTACGAGAGGTCAAAACATAACTACAGCAATAGCTCACACATCTGGTGCAACTGTTAAGCAGGTTGTTAATTCTGTATCTGGATTAAATCATTTAGAAGGTCAAGTAGTAAGTATATTGGCTGATGGTGCAACACACCCTACAAAAACTGTATCATCAAATGCTATTACATTAGATAGATTTGCAAATAAAATTAAAGTTGGATTAGGTTATACATCATTATTAAAAACTATGAGAATAGATGCCGGTTCACAGAATGGTACATCACAAGCTAAAACAAAAAGAATATATGAAGTTACTGCAAGACTATACGAAAGTGTTGGTGTTGAGGTTGGACCAGATTTAAACAATATGGAAAGAGTACCTTTTAGAACTTCTGCTAATCCTATGGATCAAGGTATTCCACCTTTTACAGGAGATAAAGAAGTAGAATTTAGAGGAGATTATGATACAGATGGATTTATGATTGTAAGGCAAACTCAACCTTTACCTTTAACAATTTTATCACTATACCCAAGGCTAGTAACAAATGATGGATAA

Genome Context

Tertiary structure

UWJ04108.1
ESMFold structure
Source ESMFold
pLDDT 94.5
Oligomeric state monomer
Download structure