Protein

View in Explore
Genbank accession
AVI04965.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MFRIDGPGATNDNKFTEGDPANGARATVVTEQWLNAVQEEIANAIEGEGLDLNKQDSAQLKGLFSGRVIRVGSVGEGFANVKAIDGFQYIPYGFYENTPLGMPAFRFKGSYAKSMHDGFNFVSPTVPPISQQSGASLKERRDNFLAGAGETDPSGNGVFVAGGEIVVPEYYGAFGTGSVGEEDDAAVYAALNSQFYRAVGNPSATYLMAGQCDVNSQIDFCLAGAAFDFQLTETVAAFYVKFDFVEIHGGTITVTGSGGAETGGNGHSLNCITSGVQLTGEGWKNLKFHDLTVTTNRTDAGAHIGLMGECSRVKIYNITAPDNPVAKNVIGIEWGGNAGGSGDTGHPHDIEVKNIVVGKFTYGGATPLFGFAVWVSSAFNVKIENIFVEEAYGAVRFYSGDKANDFAPARYKDLVGTGITAKNVGIVACIGRAIQVTGTGNSTTTILDLPVKVDGLQASAAPGSADARGFDGEQFNGVEIKRFKFSGFRFGINSRALSNNLVLQDGDVEDSGANGAFIGASGSECYNPILRNVRFKRNNQSGGTTVSNAAVRYINTTGGGVIGCTFGEEGEIETQKYSVYFEGSCRNPEISGNFTWDHVAGGFSYIIGGTKDDTQINAHGRNNRSAPGVANHASAPIFDIQTDGTRHFAADGIPGQGTFAVGDKVWFTGPLATEWVGATCVTAGSPGDWKRFGQVEA
Physico‐chemical
properties
protein length:697 AA
molecular weight: 73390,32820 Da
isoelectric point:4,98901
aromaticity:0,10473
hydropathy:-0,18465

Domains

Domains [InterPro]
IPR011050
202–429
IPR011050
AVI04965.1
1 697
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonadaceae phage B23
[NCBI] 		2094572 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVI04965.1 [NCBI]
Genbank nucleotide accession
KY939598 [NCBI]
CDS location
range 32405 -> 34498
strand +
CDS
ATGTTTCGTATTGATGGTCCAGGGGCGACGAATGACAACAAGTTCACCGAGGGCGATCCTGCGAATGGGGCGCGGGCAACGGTAGTTACCGAACAGTGGTTGAATGCGGTCCAGGAGGAAATAGCGAACGCGATAGAGGGCGAAGGCTTGGACCTCAATAAACAGGATTCTGCTCAGTTGAAAGGTCTTTTTTCAGGTCGCGTCATCCGTGTCGGGAGTGTTGGGGAAGGTTTTGCTAACGTGAAAGCCATTGATGGTTTCCAGTACATCCCTTATGGATTTTACGAAAATACACCGCTGGGAATGCCTGCGTTTCGCTTTAAGGGCAGCTACGCCAAGTCTATGCACGACGGATTTAATTTCGTTTCGCCGACGGTCCCGCCTATTAGTCAGCAGTCCGGCGCAAGCCTGAAAGAACGCCGCGACAACTTTCTGGCGGGCGCTGGTGAAACAGATCCCAGTGGCAACGGCGTTTTTGTCGCTGGCGGTGAGATTGTCGTCCCTGAGTATTACGGTGCTTTCGGTACTGGTTCGGTCGGCGAAGAGGACGACGCGGCGGTTTACGCGGCTCTTAACTCCCAATTTTATAGAGCGGTCGGCAACCCGTCGGCGACTTATCTAATGGCTGGCCAGTGTGACGTTAACAGCCAGATTGATTTTTGCTTGGCCGGTGCGGCGTTCGACTTCCAGCTAACGGAAACCGTGGCGGCCTTCTACGTAAAATTCGATTTTGTCGAGATTCACGGCGGTACGATTACCGTTACAGGATCTGGCGGTGCTGAAACTGGCGGGAACGGCCATTCTCTAAACTGTATAACGTCTGGCGTTCAGTTGACCGGGGAGGGGTGGAAAAATCTTAAATTCCACGACTTGACCGTGACAACGAATCGGACTGACGCTGGGGCTCATATTGGCCTTATGGGAGAGTGCTCCCGTGTCAAAATTTACAACATTACCGCGCCAGATAACCCGGTTGCTAAAAACGTAATCGGTATCGAATGGGGCGGCAATGCCGGCGGATCTGGGGACACCGGTCACCCGCACGACATTGAAGTAAAAAATATCGTTGTAGGAAAGTTCACCTACGGCGGAGCTACTCCGTTATTCGGATTCGCGGTTTGGGTTTCGTCGGCGTTCAATGTGAAAATAGAAAATATATTTGTAGAAGAGGCTTACGGGGCGGTTCGATTTTATTCCGGTGATAAGGCTAACGATTTTGCGCCGGCGCGTTATAAGGATCTCGTCGGGACCGGGATAACCGCGAAAAACGTCGGAATTGTCGCTTGTATCGGTCGCGCGATCCAAGTAACTGGGACCGGCAACTCAACAACGACAATTCTCGATCTGCCGGTCAAAGTGGACGGTCTGCAAGCATCTGCAGCGCCCGGCTCCGCAGATGCGAGAGGATTCGACGGTGAGCAATTTAACGGCGTCGAAATAAAGCGTTTCAAGTTCTCCGGTTTTCGCTTCGGTATAAACTCGCGGGCACTCTCTAATAATCTTGTGCTACAGGACGGGGACGTCGAGGATTCCGGTGCTAACGGAGCCTTTATAGGTGCGAGCGGTTCAGAGTGCTATAACCCGATACTCCGTAACGTACGGTTTAAGCGTAATAATCAGAGTGGGGGAACAACGGTTTCTAACGCGGCGGTACGCTACATAAATACTACTGGTGGCGGCGTTATTGGATGCACTTTTGGGGAAGAAGGCGAGATCGAAACACAAAAATATTCCGTTTACTTCGAGGGCTCTTGTCGAAACCCTGAAATTAGCGGTAATTTTACTTGGGACCATGTCGCTGGCGGTTTCAGCTATATTATAGGCGGAACAAAAGATGACACCCAGATAAACGCGCATGGCCGAAATAATCGGTCCGCTCCGGGGGTAGCCAACCATGCCAGCGCCCCAATTTTCGATATTCAGACCGATGGTACTCGGCACTTTGCGGCCGATGGTATTCCCGGGCAAGGGACGTTCGCGGTAGGCGATAAGGTGTGGTTTACCGGCCCCTTGGCTACCGAGTGGGTAGGCGCTACGTGCGTGACCGCAGGTTCGCCGGGAGATTGGAAACGGTTTGGGCAAGTCGAGGCGTAA

Tertiary structure

PDB ID
8af44a7207f05d20e657a56898e2537fd000cb3c37d51625b82e7c05a17eacac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Alteromonadaceae Phage B23 Min,Z. 2018-09-14 — GenBank