Phage RBP Database

Genbank accession

XSD94993.1 [GenBank]

Protein name

receptor binding tail protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,46

Seq2Symm

C3 confidence 0,993

C3	0,993
C1	0,020
D3	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGFYAGRIGDKKVLSLTSGNNKDVNNHTNPGWDTIFHSDMPHVVVLETHERDLWDGGDWYRCTRMPDRIIQVLSADYDRVVLTEVEFEDGTRRFIYGTSLGVGAKAYNAYFSNTVGSQVSAGTMASMKTNVCASADLHMDISFYFEETPGTINEKLRDGTGCMYTWGVNSEWGDRGPGPPVGAPIRPNFETIIKAGWVLYRGAFSGNIAGSVSPPNRPLTIGVDAMRHPWMRTTGVNSICLRGETLNRNMYGHMGPRYGMGSNPVGGPYAHNIQTESYQEVQYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNFRVPKRVRWYITNMKYNGQGFYAENVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIRVIATNVARFSGNPTVGNNGYVHFNQPLTRPDNGAEFGQGNISEMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSEATRPLRLVGGTGSADIGGNLRTSGNASHHLATLWLGVNNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNHFQKRVHQIMCLPVNMCVPFHFIRGTVTQCGVIPGNNAMQMKAMWAPTTTNSATQGDYAIIYWLIARADGSVEVWVNVEMSNIMNMRVILPEVRIAVQRLA

Physico‐chemical properties

protein length:	658 AA
molecular weight:	73315,59860 Da
isoelectric point:	8,00480
aromaticity:	0,10790
hydropathy:	-0,40912

Domain architecture

XSD94993.1

1 658 aa

RBD 1–658

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059609
RBD

IPR059609

XSD94993.1

1658 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059609	RBD	DC_0630	1	658	InterPro cluster	Receptor-binding protein pb5	Central	Medium	Text match	299 proteins / 301 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XSD94993.1

1 658 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	10	10	0,0026
Central domain	11	209	200	0,5048
C-terminal	210	658	448	0,9181

Note: Constraints were applied during segmentation.
Fixed 14 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage vB_Kpn_K7_rec14 [NCBI] · taxon 3412951

Klebsiella phage vB_Kpn_K7_rec14

Host

Klebsiella pneumoniae [NCBI] · taxon 573

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae

Genbank protein accession

XSD94993.1 [NCBI]

Genbank nucleotide accession

PQ569713 [NCBI]

CDS location

range 112002 -> 113978
strand +

CDS

ATGGGCTTTTATGCAGGAAGGATAGGCGACAAAAAAGTGTTGTCTCTTACCTCTGGCAATAATAAAGACGTTAATAACCACACTAATCCAGGTTGGGATACTATATTCCATAGCGATATGCCTCACGTTGTAGTTTTAGAAACTCACGAAAGAGACCTCTGGGATGGTGGTGATTGGTATCGTTGTACTAGAATGCCAGATAGGATTATTCAGGTACTGTCCGCAGACTACGACAGGGTTGTATTAACTGAAGTTGAGTTTGAGGATGGTACTAGACGTTTCATTTACGGTACATCCCTGGGTGTGGGCGCCAAGGCGTATAACGCTTACTTTAGTAATACTGTCGGTTCCCAGGTTTCTGCAGGTACTATGGCTAGTATGAAGACTAACGTTTGTGCTTCTGCAGACTTACACATGGATATTAGTTTCTATTTCGAAGAGACGCCAGGTACTATTAACGAGAAGCTACGAGATGGTACTGGGTGTATGTACACATGGGGCGTTAACTCAGAATGGGGGGACAGAGGGCCTGGGCCGCCGGTTGGAGCTCCTATACGTCCTAACTTTGAGACTATTATTAAAGCTGGATGGGTGCTCTATAGGGGGGCTTTTAGTGGCAATATAGCCGGTTCTGTGTCTCCGCCCAATAGACCCCTTACTATTGGTGTTGATGCTATGCGCCACCCATGGATGCGTACCACAGGAGTTAATAGTATATGTTTGCGTGGTGAGACTCTCAACCGTAATATGTACGGACATATGGGGCCTAGATACGGTATGGGGTCTAATCCCGTTGGTGGTCCTTATGCTCATAACATCCAGACTGAGTCTTATCAGGAGGTTCAGTACAAAGCAGGTTTTTTCCGTGGTCCGCCCAATAACTTTATGGGGTGGGAGAACACAGATAACAACAATGCTGGTAGTGGTTGGGGTAACAATGCCATTTACCGTGACAATAACTTCCGTGTTCCTAAACGTGTTCGCTGGTATATTACTAATATGAAATACAATGGGCAGGGGTTCTACGCAGAGAACGTATTTGGCTCCCGCAACCAGGAGATTAAAATCAGCCCTAGAGAGTTCATTGTAAACGGTATAAACCTAATGAACACCGGGTGGAAGTTTATAAACCAGAATGATATAAACTACAGCCCAGGTAATAGGCCGGATATCCGAGTTATTGCGACCAATGTTGCTAGATTTAGTGGCAACCCTACTGTTGGTAATAATGGATATGTTCACTTCAATCAGCCTCTAACTCGACCAGATAATGGTGCGGAATTTGGGCAAGGTAACATAAGTGAGATGCATGTAACCACTGTAGGAGTTTACAATTTTAGATCTGATGCGCAGTGGTATGTAAAATCCAACCCTCCGGAAATTGGAAACCAGTGGGGTCCAGTATGGTCCGAAGCAACTCGACCTCTTCGCCTAGTGGGCGGTACCGGCTCTGCTGATATTGGAGGGAACCTACGTACTAGCGGTAATGCTAGTCACCACCTGGCTACCTTGTGGTTAGGGGTTAATAACTCCCGAAATGGGGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATTGCTGCTGCAGGGATTGGATGTTATAACCCTCTAGAAGATCTTACCCAGTGGAGCGAGGTAGATAGTAGGCTGAGAATTTTCGGAAATCACTTCCAGAAACGTGTGCATCAAATCATGTGTCTTCCAGTTAACATGTGTGTGCCGTTCCACTTTATACGCGGGACCGTAACCCAGTGTGGGGTTATTCCTGGGAACAACGCCATGCAAATGAAGGCTATGTGGGCACCTACTACTACCAACTCTGCCACTCAGGGCGATTATGCCATTATCTATTGGCTGATAGCTAGAGCTGACGGTAGTGTTGAGGTTTGGGTTAACGTTGAGATGAGCAATATTATGAACATGCGCGTGATTCTTCCTGAGGTTAGGATTGCTGTGCAAAGGCTTGCCTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)