Phage RBP Database

Genbank accession

YP_009621320.1 [GenBank]

Protein name

tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,91

Seq2Symm

C3 confidence 0,984

C3	0,984
C1	0,852
C6	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADNIEIEQRVLDGDLIGPVNAEIDTEDFTGRVALENSLLDGTGSEISIELSESLGVVGIDDLVEVKSEIDKSVLKAESTVAEAQRQIDKANDTIAALNSISSQITNLVGEAKQAASTATNEAADAERSENAAAGSAKAASDSQKAAAGSAKAASDSQKAAATSQAQALASQKAAKTSETNASGSEARTAQSEKNAAASAKEADTDQKAAKAAQKAAEAARDAAKSSENKSNTYAGNAYSSKTDAETALAAAKKSEAAAAQSAKEAETSASSMTQSVADARAARDAAQNARDRSESARDISVSKASLATTKASEASSSASSASSSATAAKTSETNALNSQRAAKTSETNSKTSETNSKASERSALASKDSAAKSAAAASTSAAAAKKSQDAAKASRDEAEHFAEELRKGSVYRGIWNPNSNKYPDVPPTNSRWDVQLNNGQLEKIFDGKEWNWGDRLIYVLETKSFDIIDSGTGVTSINGETGSVTINRDTLGALGKTEKAADSAKLEGSTKAQIIAKAREGVASAGTSYNKAESDSKYLPKTGKAADSEKVGGVDITRIVYGTNRFATMQQTNFNNNRKSGFIEMSNTISASKPGRASSWVWGWQTAHTGNDTSNKYGAQLVINQDSQLYYRVQNSGGVGTWATVYSTANKPTAADVGAVPKTGGTFTSNVTVSAGGANRNALELNTGNTNGGGIHLKMTDQAGSYTQYGTIGYYHQDDNSYGGQAAFVVGTSSDTEKTNFVLTGTGNFKVGNNEVYHEGNKPTLEDVTSIASVNKSLKLTANTWTTLLTRPDGLYESGVYQILVSYNSSDKGGGAYSQNYTGQFYWYAETTNSSNVCEIPLHHMGHADNDEYIYLRTRARGRSSSETQSVDIKCNKTFTSSALFTVKLIKLM

Physico‐chemical properties

protein length:	894 AA
molecular weight:	93652,74740 Da
isoelectric point:	5,64539
aromaticity:	0,05705
hydropathy:	-0,60045

Domain architecture

YP_009621320.1

1 894 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil Coil Coil

YP_009621320.1

1894 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1362
ATT

DC_1362 DC_0401

DC_2101
STR

DC_2101

YP_009621320.1

1894 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	74	101	Coils	Coil	-	-	-	-
Coil	Unmapped	-	109	129	Coils	Coil	-	-	-	-
Coil	Unmapped	-	210	230	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Vibrio phage Thalassa [NCBI] · taxon 2570301

Uroviricota Caudoviricetes Demerecviridae Thalassavirus Thalassavirus thalassa

Host

Vibrio harveyi [NCBI] · taxon 669

Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio harveyi

Genbank protein accession

YP_009621320.1 [NCBI]

Genbank nucleotide accession

NC_042095 [NCBI]

CDS location

range 31652 -> 34336
strand +

CDS

ATGGCAGATAATATTGAAATTGAACAAAGAGTATTAGACGGGGACTTAATTGGTCCTGTCAATGCTGAAATAGATACTGAAGATTTCACTGGTCGAGTAGCCCTAGAGAACAGCCTACTTGATGGTACAGGCTCTGAAATCTCAATAGAGCTATCTGAAAGTCTTGGCGTTGTTGGTATCGACGACTTAGTAGAGGTTAAGAGTGAGATAGATAAGTCTGTACTCAAGGCTGAGTCAACTGTAGCAGAAGCTCAGAGACAGATTGATAAAGCTAATGATACAATTGCTGCGCTTAACTCTATCAGTTCTCAAATAACCAATTTAGTAGGTGAGGCTAAACAAGCAGCATCTACTGCTACTAATGAAGCTGCTGATGCAGAGAGAAGTGAAAATGCAGCGGCTGGTAGTGCAAAAGCTGCGTCTGACTCTCAAAAAGCAGCAGCAGGTAGTGCTAAGGCTGCATCCGATTCACAAAAAGCAGCCGCTACAAGTCAAGCGCAAGCACTGGCATCACAAAAAGCAGCTAAGACTTCAGAAACTAATGCGAGCGGTTCCGAAGCTAGAACTGCCCAGAGTGAGAAAAATGCAGCTGCCTCAGCAAAGGAAGCTGATACAGATCAAAAAGCAGCAAAAGCAGCGCAAAAAGCAGCAGAAGCTGCAAGAGATGCAGCTAAATCTAGCGAGAATAAGTCTAATACATACGCAGGTAATGCTTATAGTTCTAAAACAGATGCAGAAACCGCTCTAGCGGCAGCGAAGAAATCAGAAGCAGCTGCTGCACAATCAGCTAAAGAAGCGGAAACGTCAGCATCCTCTATGACTCAATCTGTAGCAGATGCTCGTGCCGCCCGAGATGCAGCACAGAACGCTAGAGATCGCTCTGAGTCAGCTAGAGATATTTCAGTTAGTAAAGCCAGCTTAGCTACTACAAAAGCCTCAGAAGCTTCTTCTAGCGCATCGAGTGCTTCTTCTAGTGCAACAGCAGCTAAAACTAGTGAAACAAATGCGCTAAACAGCCAACGTGCAGCTAAGACTTCTGAGACAAATTCAAAAACCTCAGAGACTAATTCAAAAGCTTCTGAAAGAAGTGCTTTGGCCTCGAAAGATTCCGCAGCTAAAAGTGCAGCAGCAGCCAGTACTAGTGCAGCAGCTGCTAAGAAATCTCAAGATGCCGCTAAAGCCTCACGCGACGAGGCAGAACATTTTGCAGAAGAGCTACGCAAAGGCAGTGTATATAGAGGTATTTGGAATCCAAACTCTAATAAGTACCCAGATGTTCCACCAACTAACTCTCGTTGGGACGTGCAGCTTAACAATGGGCAACTAGAGAAAATATTTGATGGTAAAGAATGGAACTGGGGTGACAGACTAATATACGTATTAGAAACCAAATCCTTCGATATAATCGACTCTGGTACAGGTGTTACTAGCATTAATGGCGAAACCGGATCAGTTACTATCAATAGAGATACTCTAGGTGCTCTAGGTAAAACTGAAAAGGCAGCAGATAGTGCAAAACTAGAGGGTAGCACTAAAGCTCAAATTATTGCTAAGGCTCGTGAAGGAGTGGCTTCAGCCGGTACTAGCTATAATAAAGCTGAGTCTGATAGCAAATACCTACCTAAAACAGGTAAGGCAGCAGATTCTGAAAAAGTTGGCGGAGTTGATATTACCAGAATAGTATATGGTACTAATCGTTTTGCAACAATGCAACAAACTAATTTCAATAATAATAGAAAATCTGGTTTTATTGAGATGAGTAATACTATTTCAGCTAGTAAACCCGGTAGAGCATCTTCTTGGGTATGGGGGTGGCAGACAGCTCATACTGGCAATGATACGTCTAATAAGTATGGTGCACAGTTAGTTATAAACCAGGATAGCCAATTATACTATCGCGTTCAGAATAGTGGTGGCGTAGGCACTTGGGCTACTGTATACTCTACAGCTAACAAACCTACGGCTGCTGATGTAGGTGCTGTTCCTAAAACTGGCGGTACATTTACATCTAATGTAACTGTTTCAGCAGGTGGAGCAAATAGAAACGCCCTTGAATTGAATACTGGTAATACTAATGGTGGTGGTATTCATCTTAAGATGACAGACCAGGCTGGTAGCTATACTCAATATGGTACTATAGGGTACTATCACCAAGACGATAATTCTTACGGAGGACAGGCTGCCTTTGTAGTAGGTACTTCTTCAGACACCGAGAAGACCAACTTTGTACTAACCGGTACTGGTAACTTCAAAGTTGGTAACAACGAAGTATACCATGAAGGTAACAAACCAACACTAGAGGATGTTACTAGTATAGCATCTGTTAATAAGAGCCTGAAACTAACAGCCAATACTTGGACTACTCTTCTAACTAGGCCGGATGGCTTATATGAGAGTGGTGTTTATCAAATACTAGTATCCTATAACTCCTCTGACAAGGGTGGTGGTGCATATAGCCAGAATTATACTGGTCAGTTCTATTGGTATGCTGAAACTACAAACTCTAGCAATGTTTGCGAAATACCTTTACACCATATGGGGCATGCAGATAATGACGAATATATTTACCTTAGAACTAGGGCTAGAGGCCGTTCAAGCAGTGAAACTCAGTCAGTAGATATTAAATGTAATAAAACTTTTACTAGTTCGGCTTTATTCACTGTGAAACTAATTAAACTAATGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)