Phage RBP Database

Genbank accession

WJN64210.1 [GenBank]

Protein name

tail fiber

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,68

Seq2Symm

C1 confidence 0,969 truncated

C1	0,969
C2	0,040
C3	0,015

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MASRKEMMGMDTETLRMLGLEAGLSFEPGLSKSKMVIQLETHQASGWLDVNSQLLHADAEGGFDHMQGFTGHEEQSISDAARVAQSLAGAGYTETFHSIMGGGRDHHVDALHQYMQKLGVSADDVWMHMPKANPNIPPQNFNMLKGYLNNHWDDYQDIMPPLEGHYAGDIMGEYSTNKGNVADSYNHLASMYLNKAAYNNPHAYEHDAALVATRLASAMGNQFLEVGYAAATGAKVGYHSILPQLGSDVVRGTQYPREPLNAAGLPLGATGSAVQGNRAHYSLVASLLGRPEGADEASSAIRQEVSSTMKSLASSYKGGGETGMNPYRHETSEHDLLLDSATRYVGIEEARSGYANLDDTSYNRNNIQAVIENSWDKMDAQAASAPSGVPNPDLRLPRRAEIGTQWSADLNEPLSWNSARSRRESIAIADLDAAHANFRDVADGSRGSSPVHFHNMEQGSDEWFKFREQYDITGSTVGGFLGSNSYTRPWAQFLDKLGVTRKDTAPNEFQEKMFAMGHQRENEARIRVSKQLGQDIQQVGAITNDMYPGMMYSPDGLIGDDALWEHKAPERAGKFADLSAGEHPDYMDQIQMGMLLSGRKKTLFSQTIGQETRNQWIDQDPDWYNKNQARLDSVLNRMQAGRDFLSNHADLPQDELKAGVRKAVTGEGIWKDVRQKSDRGYSPNAGTEADPFLIGGRRSYSDAAQGGSDYEPNFVTSANTGLVPVGGNGAETGMALAVKQGVLAAREEVKRGEASGNAAGFDAGGADADFDDLGMPRGFSRKAFDRANSDGAGGGGGNGGGRNGAGPGAFDNFGNGIASGLASGSLHGLQGGFQRELANMGPVGQTLLAGIGAASIGGEVISTMNDYLGNAQDFGSSNPIQFDAQQQGMEMLGLNKAQAQRANETVHSAFNMMANGDPSAAAQMSVATRGLITLADIRESGGDPIKLNRIFVERARSRGWSQERIAGAAQMAGLDGFARTASTSDRIRNAAEGLDDTRGRQDTSEFAGAVREDNATRAAVSPDYFVQRYGAQDYNALVGGLSGGMSKAYQLMDKAEQVTHAKSLAEATQMLESGGRDYDDKGNPLTSSTGAKYSMQVLPSTARDPGYGVKPAQSDTPEEYNRVGRELLDKMVGKYAGDYDKAAAAYTDGAGTVDRAVKQWGNDWLKHMPAQAQKRVADLHKLATGANGFAGGSTGPSVGTIQVNVTATVNGKQATATANVGNQSQSHTINVGGAVSQKR

Physico‐chemical properties

protein length:	1239 AA
molecular weight:	132534,66800 Da
isoelectric point:	5,41371
aromaticity:	0,07183
hydropathy:	-0,57651

Domain architecture

WJN64210.1

1 1239 aa

STR 444–646 · RBD 1050–1061 · STR 1062–1163 · RBD 1164–1182 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR051703
Unmapped

IPR051703 G3DSA:1.10.530.10

IPR011604
STR

IPR011604 IPR023346

IPR011335
Unmapped

IPR011335 cd00254

IPR019080
STR

IPR019080 IPR008258

WJN64210.1

11239 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0169
ATT

DC_0169 DC_0159 DC_0800

WJN64210.1

11239 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR051703	Unmapped	-	362	602	InterPro	NF-kappa-B Signaling Regulator	-	-	-	-
IPR011604	STR	IPR011604	444	646	Merged direct domain	PD-(D/E)XK endonuclease-like domain superfamily	Central	Low	Positional only	46 proteins / 46 hits
IPR011335	Unmapped	-	454	638	InterPro	Restriction endonuclease type II-like	-	-	-	-
IPR019080	STR	DC_0765	462	599	InterPro cluster	YqaJ viral recombinase	Central	Low	Positional only	44 proteins / 44 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	1050	1182	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR023346	STR	IPR023346	1062	1163	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
cd00254	ENZ	DC_0010	1072	1159	InterPro cluster	cd00254	C-terminal	High	Text match	100 proteins / 142 hits
IPR008258	ENZ	DC_0010	1086	1160	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits

Proteins with similar domain architecture

Phage

Erwinia phage Nougat [NCBI] · taxon 3056599

Uroviricota Caudoviricetes Chaseviridae Loessnervirus Loessnervirus Y2

Host

Erwinia amylovora [NCBI] · taxon 552

Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Erwinia Erwinia amylovora

Genbank protein accession

WJN64210.1 [NCBI]

Genbank nucleotide accession

OQ818701.1 [NCBI]

CDS location

range 12658 -> 16377
strand -

CDS

ATGGCTAGCAGAAAAGAAATGATGGGCATGGATACGGAAACTCTCCGTATGCTTGGTCTTGAGGCCGGATTATCTTTTGAGCCCGGACTCTCGAAGTCCAAAATGGTTATACAACTGGAGACTCATCAAGCTTCCGGTTGGTTAGATGTGAACAGCCAACTTCTTCATGCAGATGCGGAAGGCGGCTTTGACCACATGCAGGGCTTTACAGGTCACGAAGAACAATCCATTTCTGACGCTGCAAGAGTTGCACAATCGTTGGCTGGTGCTGGTTACACTGAAACATTCCACTCCATAATGGGTGGCGGTCGTGACCATCATGTTGATGCCCTTCATCAATACATGCAGAAACTTGGTGTCTCTGCTGATGATGTTTGGATGCACATGCCAAAGGCGAATCCCAATATTCCGCCTCAGAATTTCAACATGCTGAAAGGTTATTTAAATAACCATTGGGATGATTATCAGGATATTATGCCTCCACTTGAAGGGCATTATGCTGGTGATATCATGGGCGAGTATTCTACGAATAAAGGCAACGTTGCTGATTCGTACAATCATCTTGCATCCATGTATTTAAATAAAGCTGCTTACAACAATCCTCACGCATATGAACATGATGCTGCGCTTGTTGCAACGCGTTTGGCTTCGGCAATGGGAAATCAATTCCTCGAAGTTGGTTATGCTGCTGCAACTGGTGCGAAGGTTGGATATCATTCTATTCTTCCGCAACTTGGCTCTGATGTTGTTCGTGGTACTCAGTATCCTCGCGAACCTCTGAATGCTGCTGGTTTACCTTTGGGTGCAACTGGTTCTGCTGTTCAGGGCAACCGCGCACATTATTCTTTGGTTGCTTCTTTGCTCGGTCGTCCAGAAGGTGCTGATGAAGCATCGAGTGCGATTCGTCAGGAAGTAAGCTCAACAATGAAGTCTCTGGCATCGTCTTATAAAGGCGGTGGTGAAACAGGAATGAATCCTTATCGCCACGAAACGTCAGAGCATGACTTATTGCTGGATAGTGCGACACGTTATGTTGGTATCGAAGAAGCTCGTTCAGGTTATGCAAACTTGGATGACACCTCATACAATCGCAACAACATTCAGGCAGTAATCGAAAACAGCTGGGACAAGATGGATGCTCAGGCAGCGTCTGCACCATCTGGTGTTCCCAATCCAGACCTTCGTTTACCACGTCGTGCGGAGATTGGTACTCAATGGAGTGCTGATTTAAACGAACCATTGTCTTGGAACTCTGCTCGTTCTCGTAGAGAGAGCATTGCAATTGCAGATTTGGATGCTGCTCATGCAAACTTTCGTGATGTTGCTGATGGAAGTCGTGGTTCAAGCCCTGTTCACTTCCACAACATGGAACAAGGAAGTGATGAATGGTTCAAGTTCCGTGAACAATATGATATTACCGGCTCAACAGTTGGTGGTTTCTTAGGTTCAAACAGCTACACCCGTCCGTGGGCACAGTTCTTGGACAAACTTGGGGTCACTCGTAAGGACACAGCGCCAAACGAATTCCAAGAAAAGATGTTTGCCATGGGACACCAGCGAGAAAATGAAGCTCGCATTCGTGTTTCCAAACAACTCGGTCAGGATATCCAACAAGTTGGTGCAATAACCAACGACATGTATCCCGGAATGATGTATTCACCAGATGGATTGATTGGTGATGACGCATTGTGGGAGCATAAAGCTCCTGAACGTGCTGGCAAGTTTGCGGATTTAAGTGCTGGCGAACATCCAGACTACATGGACCAGATTCAAATGGGCATGTTGTTATCTGGACGCAAGAAAACTCTATTCTCGCAGACGATTGGGCAAGAAACTCGCAACCAATGGATTGACCAAGACCCGGATTGGTATAACAAGAACCAAGCTCGTTTGGATTCTGTGCTCAACCGTATGCAAGCTGGTCGTGACTTCCTCTCGAATCATGCTGACCTTCCTCAAGATGAATTGAAAGCCGGTGTTCGTAAAGCTGTAACAGGCGAAGGAATCTGGAAAGATGTTCGTCAGAAATCAGACCGTGGTTACTCGCCAAATGCTGGTACAGAAGCTGACCCATTCTTAATAGGCGGTCGTCGTTCTTATAGTGACGCTGCTCAAGGTGGCTCAGATTACGAACCGAACTTTGTGACTAGTGCCAATACTGGCCTCGTTCCAGTGGGCGGTAACGGCGCTGAGACGGGCATGGCGCTTGCGGTTAAGCAAGGTGTACTGGCGGCAAGGGAAGAGGTAAAACGCGGCGAGGCTTCGGGTAACGCAGCAGGATTTGATGCTGGCGGTGCCGATGCGGACTTTGACGATTTGGGTATGCCTCGCGGCTTCTCACGTAAGGCGTTCGACCGGGCAAACAGTGACGGCGCTGGCGGGGGCGGTGGAAACGGCGGTGGACGCAATGGCGCTGGCCCAGGCGCGTTTGACAACTTCGGCAATGGGATTGCATCGGGTTTGGCAAGCGGCTCACTGCATGGCCTACAGGGAGGATTCCAGCGTGAACTAGCAAACATGGGGCCGGTTGGTCAAACTCTGTTGGCTGGTATCGGAGCGGCGTCAATTGGTGGTGAAGTCATTTCAACAATGAATGACTATCTTGGAAATGCTCAGGACTTTGGTTCAAGCAATCCAATTCAATTTGACGCTCAACAGCAAGGCATGGAAATGCTTGGGCTTAACAAAGCTCAGGCCCAACGTGCAAATGAAACAGTTCACTCTGCTTTCAACATGATGGCGAATGGCGACCCAAGTGCTGCCGCTCAAATGTCTGTTGCAACTCGTGGACTTATCACGCTTGCTGATATCCGTGAAAGCGGTGGCGACCCAATCAAGTTAAACCGCATCTTTGTTGAACGTGCCCGTTCTCGTGGCTGGAGTCAGGAAAGAATTGCTGGTGCTGCTCAAATGGCAGGACTTGATGGATTTGCTCGTACTGCCTCAACTTCTGACCGAATCCGAAATGCTGCGGAAGGTCTTGATGACACTCGTGGTCGTCAGGATACTTCTGAGTTTGCTGGTGCTGTTCGTGAAGACAATGCAACTCGTGCTGCTGTATCTCCTGACTATTTCGTTCAACGTTATGGTGCCCAGGATTACAACGCATTGGTTGGTGGTTTGTCTGGTGGTATGTCAAAAGCATATCAGCTTATGGACAAAGCCGAACAAGTTACTCATGCCAAATCTCTTGCAGAAGCAACACAAATGCTTGAGTCTGGTGGTCGTGATTACGATGATAAGGGTAATCCGTTAACCAGTTCTACTGGTGCCAAATACTCAATGCAGGTTCTTCCTTCTACTGCACGTGACCCAGGATATGGAGTCAAGCCTGCTCAAAGTGATACACCAGAAGAATACAATCGTGTTGGTCGAGAACTTCTCGATAAGATGGTTGGTAAGTATGCTGGTGATTATGACAAAGCGGCTGCTGCATATACTGACGGTGCCGGTACTGTAGACAGAGCGGTTAAGCAATGGGGCAATGACTGGCTTAAACATATGCCAGCACAGGCTCAGAAACGTGTTGCTGATTTGCATAAACTGGCAACTGGTGCAAATGGATTTGCTGGTGGTTCTACTGGCCCATCTGTTGGAACTATCCAAGTTAATGTCACTGCGACTGTTAATGGTAAGCAAGCAACTGCAACTGCAAATGTCGGCAATCAATCTCAGTCTCACACTATTAATGTGGGTGGCGCTGTTTCTCAGAAGCGTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)