Phage RBP Database

Genbank accession

SEI30465.1 [GenBank]

Protein name

Tail protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,78

Seq2Symm

C3 confidence 0,075

C3	0,075
C2	0,069
C1	0,038

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKLSKITLFYDTPMTTLNETIHFDTTEERERYFFITSGFKKVSFEGDFNLVKDRLTLRLPIPYEDCDGINYGHFKDGFTGKDYYFYVMTTQYANEKVTMFQVVVDVLMTFTQGKVLTGISNVTVNRQHLPENMYQRRLIEIKTNSDILQATSKQYVYQKNYKFKDLVVLIRSSVDLSADFGSLEKPIIKLPKGGSYDKIVSPVGLYMVESKNFQKFSIALRDYPWIGQNISDITLLPKEMIDLTKLLKVKLNNEDFDTLYQLPDGGLSMEGNLISMNTRKSDLMYVLKVPSNEEHIFRAGYYTCEVYNWAGESLNLDLAQIPDAGLQFGMRQSIGFHNEMRIFVRYWQASSEEERGVPTGTFLNNSLTYNNFTQVPLLIDNYKLSLANNANTIAYNNSQTTTGRVKNIGKNLADPNQSILEKATNIFTDAYSLMGGGLSLTNIGSKIASDTEYYRKQRAEFADLALSSPSLTTSNGGQAFNIKNDIFGFTVKFSAPSEAEVEKIRKYYSMMGFEFNEKGVVEDIHSMTICNYLQIDGQFKINGIPTQYMEQLKALLMAGVRFWHFNNKQNPFTQNPLENKRRNV

Physico‐chemical properties

protein length:	584 AA
molecular weight:	66818,27620 Da
isoelectric point:	6,69702
aromaticity:	0,11986
hydropathy:	-0,36507

Domain architecture

SEI30465.1

1 584 aa

TAS 3–113 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR031772
TAS

IPR031772

IPR031772
TAS

IPR031772

SEI30465.1

1584 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0080
STR

DC_0080

SEI30465.1

1584 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR031772	TAS	DC_0461	3	113	InterPro cluster	Tail knob protein gp9, N-terminal	N-terminal	High	Text match	94 proteins / 94 hits
IPR031772	TAS	DC_0461	3	110	InterPro cluster	Tail knob protein gp9, N-terminal	N-terminal	High	Text match	94 proteins / 94 hits

Proteins with similar domain architecture

Phage

Enterococcus phage Idefix [NCBI] · taxon 2017580

Uroviricota Caudoviricetes Rountreeviridae Copernicusvirus Copernicusvirus Idefix

Host No host information

Genbank protein accession

SEI30465.1 [NCBI]

Genbank nucleotide accession

LT630001 [NCBI]

CDS location

range 10236 -> 11990
strand -

CDS

ATGAAACTTTCAAAGATTACTTTATTTTACGACACACCAATGACAACGTTAAATGAAACGATTCACTTTGACACAACCGAAGAAAGAGAACGTTATTTCTTTATCACGAGTGGTTTTAAAAAAGTATCTTTTGAAGGTGATTTCAATCTTGTAAAGGATAGGCTTACTTTGCGTTTGCCTATTCCTTATGAGGATTGTGACGGTATCAATTACGGCCACTTTAAAGATGGTTTCACTGGAAAAGACTACTATTTCTATGTAATGACCACTCAATACGCAAATGAAAAAGTAACAATGTTTCAAGTTGTTGTTGACGTTTTAATGACCTTTACACAAGGAAAAGTATTAACTGGTATTTCGAATGTTACGGTTAACCGTCAACATTTACCAGAAAATATGTATCAAAGACGTTTAATAGAAATTAAAACAAATAGTGATATTTTGCAAGCAACATCTAAACAGTATGTATATCAAAAAAACTATAAATTTAAAGATTTGGTTGTTCTTATTCGTTCTAGTGTTGACTTATCGGCTGACTTTGGTAGTTTAGAAAAACCAATTATTAAATTACCAAAAGGAGGTTCATATGATAAAATTGTCAGCCCCGTAGGTTTGTATATGGTAGAATCTAAAAACTTCCAAAAATTTTCTATTGCTTTGAGAGATTATCCATGGATTGGTCAAAACATTAGTGATATTACTTTATTACCTAAAGAAATGATTGACTTAACTAAATTGTTAAAAGTAAAACTAAACAACGAAGATTTTGACACTCTTTATCAACTGCCAGACGGTGGCTTGTCGATGGAGGGGAATTTAATTTCTATGAACACCAGAAAATCAGATTTGATGTATGTTTTGAAAGTTCCATCTAATGAAGAACACATTTTTAGAGCCGGATATTACACCTGTGAGGTTTATAACTGGGCGGGTGAATCTTTAAACTTAGACTTAGCACAAATACCAGATGCGGGGCTTCAATTTGGAATGCGCCAATCGATTGGTTTTCATAATGAAATGAGGATTTTTGTAAGATATTGGCAAGCTAGCAGTGAAGAAGAAAGAGGTGTTCCAACTGGAACATTCTTAAATAATTCACTAACTTATAACAACTTCACACAAGTTCCATTGTTAATTGACAATTATAAATTATCACTTGCTAACAACGCTAATACAATAGCCTATAACAACTCACAAACGACTACAGGTCGTGTCAAAAACATTGGCAAGAACTTAGCAGACCCTAACCAATCGATATTAGAAAAAGCTACTAATATATTCACTGATGCTTATTCGCTTATGGGTGGTGGTTTATCACTAACTAACATCGGTAGTAAAATTGCTAGTGATACGGAATACTACCGCAAACAACGTGCTGAATTTGCTGACTTAGCTCTAAGTTCACCAAGCTTAACAACAAGCAACGGAGGGCAAGCCTTTAATATTAAAAATGATATATTCGGTTTTACTGTTAAGTTTTCGGCTCCCAGTGAAGCAGAAGTTGAAAAAATAAGAAAATATTACAGCATGATGGGTTTTGAGTTTAACGAAAAAGGTGTTGTAGAGGATATTCATTCCATGACGATCTGTAACTATTTACAAATTGATGGCCAGTTTAAAATTAATGGGATCCCTACGCAATACATGGAACAATTAAAAGCTTTATTAATGGCTGGTGTTCGTTTTTGGCATTTTAACAATAAACAGAACCCATTTACACAAAACCCACTAGAAAACAAAAGGAGAAACGTTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)