Protein

View in Explore
Genbank accession
YP_001456751.1 [GenBank]
Protein name
gp21, tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAVEVTVDIKDIFGDTDNRDKVRAWSPGIREAGDGLINSRPQTKQLVNGKATLTLEPGPVTVQFLPIGAAGKTKFEGVVPDTGPVTLRSVIEGDFTYTPPVVGEAQKASREAVQAADRAKGIADKFGDVDTAIAQAKTSENNAKASETADKTSQTAAKTSETNAKTSETNAGASATAASTSATNAKTSETNAGASATAASTSATNAKTSQTAAKTSETNAKTSETNAGASATAAANSATSASNSAASIKTSETNAGASATAAANSATAAGLAADRAAVQPRVRPI
Physico‐chemical
properties
protein length:285 AA
molecular weight: 28408,63040 Da
isoelectric point:6,42709
aromaticity:0,02456
hydropathy:-0,40491

Domains

Domains [InterPro]
DC_0401
STR
28–211
DC_0401
DC_0608
ATT
193–281
DC_0608
YP_001456751.1
1 285
Architecture
STR
ATT
STR 28-192 | ATT 193-281 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage BFK20
[NCBI] 		28358 Uroviricota > Caudoviricetes > Sasvirus >
Host Brevibacterium flavum
[NCBI] 		92706 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001456751.1 [NCBI]
Genbank nucleotide accession
NC_009799.3 [NCBI]
CDS location
range 18613 -> 19470
strand +
CDS
ATGGCCGTAGAAGTCACAGTAGACATTAAAGATATTTTCGGTGATACGGATAACCGGGACAAGGTGCGCGCGTGGTCTCCCGGTATTCGCGAGGCCGGGGACGGGCTTATCAATTCTCGCCCCCAAACTAAGCAACTGGTCAACGGTAAAGCTACGCTCACTCTTGAACCTGGCCCCGTGACCGTCCAGTTCTTGCCTATCGGTGCAGCGGGTAAAACAAAATTCGAGGGCGTTGTACCGGATACCGGCCCGGTAACGCTGCGCTCGGTTATCGAGGGCGATTTTACTTATACCCCGCCTGTGGTGGGCGAAGCTCAAAAAGCGTCCCGTGAGGCGGTACAAGCTGCGGATCGTGCTAAGGGTATCGCCGATAAATTCGGCGACGTAGATACCGCTATCGCTCAAGCCAAGACAAGCGAGAATAACGCTAAGGCGAGCGAGACGGCAGATAAGACCTCACAGACCGCAGCCAAGACAAGCGAGACTAACGCTAAGACCTCGGAGACTAACGCCGGGGCTAGTGCTACGGCTGCGTCTACGTCGGCGACTAACGCTAAGACCTCGGAGACTAACGCCGGGGCTAGTGCTACGGCTGCGTCTACGTCGGCGACTAACGCTAAGACCTCTCAGACTGCAGCCAAGACAAGTGAGACTAACGCCAAGACGAGTGAGACTAACGCCGGGGCTAGTGCTACGGCTGCAGCCAACTCAGCTACGTCAGCGTCCAACTCTGCAGCGAGTATCAAGACGAGCGAGACTAACGCCGGGGCTAGTGCCACGGCTGCAGCCAACTCAGCTACGGCAGCCGGTCTCGCTGCGGATCGTGCGGCAGTGCAACCACGGGTAAGGCCGATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cea9ad8f9c03b0a93bc780db0138e8858b6c5cd2b9aaabc81eb90a3040ac1dd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Transcriptional profiling of bacteriophage BFK20: coexpression interrogated by 'guilt-by-association' algorithm Majtan,T., Halgasova,N., Bukovska,G. and Timko,J. 2007 17052739 GenBank
Complete nucleotide sequence and genome analysis of bacteriophage BFK20--a lytic phage of the industrial producer Brevibacterium flavum Bukovska,G., Klucar,L., Vlcek,C., Adamovic,J., Turna,J. and Timko,J. 2006 16457869 GenBank
Characterization and sequence analysis of the F2 promoter from corynephage BFK20 Koptides,M., Ugorcakova,J., Baloghova,E., Bukovska,G. and Timko,J. 1994 7879712 GenBank
Characterization of bacteriophage BFK20 from Brevibacterium flavum Koptides,M., Barak,I., Sisova,M., Baloghova,E., Ugorcakova,J. and Timko,J. 1992 1512569 GenBank