Protein
View in Explore- Genbank accession
- AWH15327.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSPTSPTF
- Protein sequence
-
MTDKTFLHGIEHILKTAMGELPEGVQLVTTVNGMTGEVRLTAQNVGAVPDTRMINGKELNKDIRLTAANVEAVPTSALEVGEGEVLKAGGATIKSVKERLATVEKQHTDDVKDLVPNARKVNNKPLTADVTLSAADVKARPDNWKPVIADVTNLETALAAKADKVDVPEQAPLPDVWAPLTSNLSLIHGFGSKVEFARTTAASYIDKSGNLKMAAINEPRFEKNGLLLEVQSTNLYTTSEFNGTNYYESNSATTDVVETQTKFGKAATLKLLALEASSRYIWRAGHADGMELGKTFTLSFWVFIDNPNVVSVAVGSNALINAAGGTRTVHPVQHNRWYRLTHTGVCETLSSTGFIWPYGPSGSTVDNLAIGDSIITVTASQCEALPYATSYIKTTGAQATRGRDECYIVKDLNSPDYHDDRTYAIEANVFGKSVSNYEFLFSDGRYPTRKHISLWDDGVLAANNDYIKANKRDVARLKGCYAACFDYDGGKVTLVDNGELIESTAPCTNNPANPEEIAGAKIEFGSAGNFGNQCSLHVRNFRIWHRALTKNQLKGIR
- Physico‐chemical
properties -
protein length: 557 AA molecular weight: 60497,35060 Da isoelectric point: 6,10385 aromaticity: 0,07540 hydropathy: -0,29210
Domains
Domains [InterPro]
DC_1150
STR
4–88
STR
4–88
IPR013320
STR
439–555
STR
439–555
1
557
Architecture
STR 4-88 | STR 132-557
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
557
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 410 | 410 | 0,4170 |
| Central domain | 411 | 546 | 137 | 0,5498 |
| C-terminal | 547 | 557 | 10 | 0,9969 |
Note: Constraints were applied during segmentation.
Fixed 236 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 236 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-410
1-410
Central
411-546
411-546
C-terminal
547-557
547-557
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Aeromonas phage 14AhydR10PP [NCBI] |
2163987 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Aeromonas hydrophila [NCBI] |
644 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AWH15327.1
[NCBI]
Genbank nucleotide accession
MH179471
[NCBI]
CDS location
range 18482 -> 20155
strand +
strand +
CDS
ATGACCGACAAGACATTCCTTCACGGGATAGAGCACATCCTGAAAACGGCCATGGGGGAGTTGCCGGAAGGCGTCCAGTTGGTGACTACAGTCAACGGGATGACGGGTGAGGTGAGGCTGACCGCCCAGAACGTTGGAGCCGTACCAGACACCCGCATGATCAACGGCAAGGAGCTGAATAAAGACATCCGGCTCACTGCGGCCAACGTGGAGGCGGTGCCAACCTCCGCCCTTGAAGTTGGTGAGGGTGAGGTTTTGAAGGCTGGGGGTGCCACCATCAAGTCAGTTAAGGAGCGCCTTGCCACTGTTGAGAAGCAACACACGGATGATGTGAAGGACTTGGTTCCAAACGCCCGCAAGGTGAACAACAAGCCCCTGACTGCTGATGTTACCCTGTCAGCCGCTGATGTGAAGGCCCGACCTGACAACTGGAAGCCAGTCATTGCTGATGTGACCAACCTTGAAACCGCACTAGCAGCCAAGGCGGATAAGGTTGATGTTCCAGAGCAAGCCCCGCTCCCTGATGTGTGGGCGCCGCTCACCAGTAATCTGTCACTGATTCATGGCTTCGGTAGCAAGGTGGAGTTTGCGAGAACCACTGCGGCTTCGTATATCGACAAGTCGGGCAACCTCAAGATGGCCGCCATCAATGAACCCCGCTTCGAGAAAAATGGCCTCCTGCTGGAAGTGCAGAGCACCAATCTTTACACAACCAGCGAGTTCAACGGCACCAACTATTACGAATCCAATTCAGCCACAACCGATGTGGTGGAGACTCAGACCAAGTTTGGCAAGGCTGCAACCTTGAAACTGCTGGCATTGGAGGCGAGTTCACGTTACATCTGGCGGGCTGGTCACGCTGATGGCATGGAGCTGGGCAAGACCTTCACCCTGTCATTCTGGGTCTTCATTGATAACCCGAATGTGGTAAGCGTAGCGGTTGGCTCTAACGCCCTGATTAACGCCGCTGGCGGCACTCGGACGGTTCACCCGGTGCAGCACAATAGATGGTATCGCCTCACTCACACCGGCGTCTGTGAGACCCTGAGCAGCACCGGCTTTATCTGGCCTTATGGCCCTTCCGGTTCCACGGTGGATAATCTGGCAATCGGTGACTCGATCATCACAGTCACAGCCAGTCAGTGCGAAGCTCTGCCATATGCGACCAGCTACATCAAGACCACTGGCGCACAGGCTACGCGGGGCCGGGACGAGTGTTACATAGTGAAGGACTTGAATTCTCCTGATTACCACGATGACCGGACTTATGCGATTGAGGCGAATGTTTTTGGTAAGTCGGTGAGCAATTATGAATTCCTGTTCAGCGATGGTCGATACCCAACCCGAAAGCACATATCCCTGTGGGATGATGGGGTGCTAGCAGCAAATAACGACTACATCAAGGCGAACAAGCGTGACGTAGCCCGCCTGAAAGGGTGTTATGCCGCCTGCTTTGATTACGATGGTGGCAAGGTAACGCTGGTGGACAATGGGGAGCTGATCGAGAGTACGGCACCTTGCACCAACAACCCGGCCAACCCGGAGGAGATTGCCGGGGCAAAGATAGAGTTCGGCTCCGCTGGTAACTTCGGCAACCAATGCTCCCTCCATGTGCGCAACTTCCGAATCTGGCACCGGGCTTTGACTAAAAACCAACTGAAAGGCATACGCTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
6cfcd5100c701c4054c6ccacde2f745c02f5a19860b2fd5b73b54e0d60864466
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Complete genome sequences of new Aeromonas and Pseudomonas phages promising in phage therapy dedicated to aquaculture | Stanczyk,M. | 2011-09 | — | GenBank |