Protein
- Genbank accession
- AWH15327.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSPTSPTF
- Seq2Symm
-
C1 confidence 0,479
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).C1 0,479 C3 0,316 I 0,013 - Protein sequence
-
MTDKTFLHGIEHILKTAMGELPEGVQLVTTVNGMTGEVRLTAQNVGAVPDTRMINGKELNKDIRLTAANVEAVPTSALEVGEGEVLKAGGATIKSVKERLATVEKQHTDDVKDLVPNARKVNNKPLTADVTLSAADVKARPDNWKPVIADVTNLETALAAKADKVDVPEQAPLPDVWAPLTSNLSLIHGFGSKVEFARTTAASYIDKSGNLKMAAINEPRFEKNGLLLEVQSTNLYTTSEFNGTNYYESNSATTDVVETQTKFGKAATLKLLALEASSRYIWRAGHADGMELGKTFTLSFWVFIDNPNVVSVAVGSNALINAAGGTRTVHPVQHNRWYRLTHTGVCETLSSTGFIWPYGPSGSTVDNLAIGDSIITVTASQCEALPYATSYIKTTGAQATRGRDECYIVKDLNSPDYHDDRTYAIEANVFGKSVSNYEFLFSDGRYPTRKHISLWDDGVLAANNDYIKANKRDVARLKGCYAACFDYDGGKVTLVDNGELIESTAPCTNNPANPEEIAGAKIEFGSAGNFGNQCSLHVRNFRIWHRALTKNQLKGIR
- Physico‐chemical
properties -
protein length: 557 AA molecular weight: 60497,35060 Da isoelectric point: 6,10385 aromaticity: 0,07540 hydropathy: -0,29210
Domains
Domain architecture
AWH15327.1
1
557 aa
STR 439–555 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
AWH15327.1
1
557 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 410 | 410 | 0,4170 |
| Central domain | 411 | 546 | 137 | 0,5498 |
| C-terminal | 547 | 557 | 10 | 0,9969 |
Note: Constraints were applied during segmentation.
Fixed 236 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 236 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Coding sequence (CDS)
Genbank protein accession
AWH15327.1
[NCBI]
Genbank nucleotide accession
MH179471
[NCBI]
CDS location
range 18482 -> 20155
strand +
strand +
CDS
ATGACCGACAAGACATTCCTTCACGGGATAGAGCACATCCTGAAAACGGCCATGGGGGAGTTGCCGGAAGGCGTCCAGTTGGTGACTACAGTCAACGGGATGACGGGTGAGGTGAGGCTGACCGCCCAGAACGTTGGAGCCGTACCAGACACCCGCATGATCAACGGCAAGGAGCTGAATAAAGACATCCGGCTCACTGCGGCCAACGTGGAGGCGGTGCCAACCTCCGCCCTTGAAGTTGGTGAGGGTGAGGTTTTGAAGGCTGGGGGTGCCACCATCAAGTCAGTTAAGGAGCGCCTTGCCACTGTTGAGAAGCAACACACGGATGATGTGAAGGACTTGGTTCCAAACGCCCGCAAGGTGAACAACAAGCCCCTGACTGCTGATGTTACCCTGTCAGCCGCTGATGTGAAGGCCCGACCTGACAACTGGAAGCCAGTCATTGCTGATGTGACCAACCTTGAAACCGCACTAGCAGCCAAGGCGGATAAGGTTGATGTTCCAGAGCAAGCCCCGCTCCCTGATGTGTGGGCGCCGCTCACCAGTAATCTGTCACTGATTCATGGCTTCGGTAGCAAGGTGGAGTTTGCGAGAACCACTGCGGCTTCGTATATCGACAAGTCGGGCAACCTCAAGATGGCCGCCATCAATGAACCCCGCTTCGAGAAAAATGGCCTCCTGCTGGAAGTGCAGAGCACCAATCTTTACACAACCAGCGAGTTCAACGGCACCAACTATTACGAATCCAATTCAGCCACAACCGATGTGGTGGAGACTCAGACCAAGTTTGGCAAGGCTGCAACCTTGAAACTGCTGGCATTGGAGGCGAGTTCACGTTACATCTGGCGGGCTGGTCACGCTGATGGCATGGAGCTGGGCAAGACCTTCACCCTGTCATTCTGGGTCTTCATTGATAACCCGAATGTGGTAAGCGTAGCGGTTGGCTCTAACGCCCTGATTAACGCCGCTGGCGGCACTCGGACGGTTCACCCGGTGCAGCACAATAGATGGTATCGCCTCACTCACACCGGCGTCTGTGAGACCCTGAGCAGCACCGGCTTTATCTGGCCTTATGGCCCTTCCGGTTCCACGGTGGATAATCTGGCAATCGGTGACTCGATCATCACAGTCACAGCCAGTCAGTGCGAAGCTCTGCCATATGCGACCAGCTACATCAAGACCACTGGCGCACAGGCTACGCGGGGCCGGGACGAGTGTTACATAGTGAAGGACTTGAATTCTCCTGATTACCACGATGACCGGACTTATGCGATTGAGGCGAATGTTTTTGGTAAGTCGGTGAGCAATTATGAATTCCTGTTCAGCGATGGTCGATACCCAACCCGAAAGCACATATCCCTGTGGGATGATGGGGTGCTAGCAGCAAATAACGACTACATCAAGGCGAACAAGCGTGACGTAGCCCGCCTGAAAGGGTGTTATGCCGCCTGCTTTGATTACGATGGTGGCAAGGTAACGCTGGTGGACAATGGGGAGCTGATCGAGAGTACGGCACCTTGCACCAACAACCCGGCCAACCCGGAGGAGATTGCCGGGGCAAAGATAGAGTTCGGCTCCGCTGGTAACTTCGGCAACCAATGCTCCCTCCATGTGCGCAACTTCCGAATCTGGCACCGGGCTTTGACTAAAAACCAACTGAAAGGCATACGCTGA
Genome Context
Tertiary structure
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Complete genome sequences of new Aeromonas and Pseudomonas phages promising in phage therapy dedicated to aquaculture | Stanczyk,M. | 2011-09 | — | GenBank |