Protein

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Genbank accession
AFQ22529.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MYSVQIAVSDGTLTRIALSIEYFEKDDITLYRNLELTPLVLGTDWQWDGDTHINLLTGIPVPVGSYITVRRNTDIDRAFNIYDGGAAFNRETLDENFKQMIYLAQEFTEGNGLTGLYFPLDMHGFQIKNLGEPTDPGDAVTKQYVDTANTAQNANFNASQQAQDQAVAASQAVQDNRLASLENTFVQATSSYPWYTVSTSTTDTFTPGFNFTKAAVYINGVCQTPDYSYIVVANQILLADPVPLGTMVFARLGEDIQNDDDFATTAQLSAVQANLQDEIDVTNTEVSNKASKGANSDISSLSGLTTPLSAAQGGTGNNTGNAATATVLATPRTIQTNLASTSAASFNGSANITPGVTGNLPVTNGGTGAGSAPSARANLGAAMNGINNDISNLAALTGGITGLTTGTAAASGIVGEVASAASSSATNLVSGSVINIISLSLPAGDWELESAFQIINTGNVTALAFGVSTTTGVLPTPWYDVYSITTTIGSGTSNRQGMARRVLLSTTTTVYLVAQATFTGTATANGYVRARRVR
Physico‐chemical
properties
protein length:534 AA
molecular weight: 55826,02600 Da
isoelectric point:4,35548
aromaticity:0,07491
hydropathy:-0,04457

Domains

Domains [InterPro]
DC_1894
ATT
1–193
DC_1894
IPR005604
ATT
3–108
IPR005604 DC_1547
AFQ22529.1
1 534
Architecture
ATT
STR
ATT 1-193 | STR 194-534
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFQ22529.1
1 534
Domain Start End Length (AA) Confidence
N-terminal 1 325 325 0,9883
Central domain 326 523 199 0,1298
C-terminal 524 534 10 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-325
Central
326-523
C-terminal
524-534

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PhiM1
[NCBI] 		1211386 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Phimunavirus
Host Pectobacterium atrosepticum SCRI1043
[NCBI] 		218491 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFQ22529.1 [NCBI]
Genbank nucleotide accession
JX290549 [NCBI]
CDS location
range 35998 -> 37602
strand +
CDS
ATGTACTCAGTCCAGATTGCCGTATCAGACGGTACTCTAACTCGAATTGCACTGAGCATCGAGTACTTTGAGAAAGATGATATCACGCTGTACCGTAATCTGGAACTGACCCCACTTGTACTGGGTACTGATTGGCAATGGGATGGGGATACCCACATCAACTTGCTGACTGGTATCCCAGTACCAGTAGGTAGCTACATTACTGTACGCCGTAATACAGATATTGACCGTGCCTTTAATATTTATGACGGGGGTGCGGCGTTTAACCGAGAAACCCTTGATGAGAACTTCAAGCAGATGATTTACCTTGCGCAGGAGTTCACTGAGGGTAATGGACTTACCGGCCTGTACTTCCCATTGGATATGCACGGTTTTCAGATTAAGAACTTGGGGGAACCTACCGACCCTGGGGATGCGGTTACTAAACAGTACGTAGATACTGCTAATACTGCACAGAATGCTAACTTTAATGCTAGTCAACAGGCGCAGGACCAAGCAGTAGCCGCATCGCAGGCTGTACAAGATAATCGGTTAGCCTCCCTTGAGAATACTTTCGTTCAGGCCACTTCTAGTTATCCGTGGTACACAGTGAGCACTAGTACGACGGACACGTTCACACCCGGCTTTAACTTCACCAAGGCAGCAGTGTACATCAACGGAGTATGCCAGACACCGGACTACAGTTACATCGTAGTGGCTAATCAGATACTCCTTGCAGACCCCGTGCCACTAGGCACGATGGTCTTTGCCCGGCTAGGGGAAGACATTCAGAACGATGATGATTTTGCCACTACTGCACAGCTTAGTGCGGTACAGGCAAACCTACAGGATGAGATTGATGTCACTAACACAGAGGTTAGTAACAAGGCTAGTAAGGGTGCAAACTCCGATATTAGCAGCCTGTCTGGTTTAACCACGCCACTTAGTGCTGCACAGGGTGGAACGGGGAACAACACGGGGAATGCTGCGACAGCAACTGTACTTGCTACCCCCCGAACAATCCAGACTAACCTAGCCAGCACTAGCGCTGCGAGTTTTAATGGTTCAGCTAACATTACACCGGGCGTAACTGGAAATCTCCCAGTTACTAATGGGGGTACCGGGGCTGGCTCCGCACCTAGCGCACGTGCTAACCTCGGCGCAGCTATGAATGGTATCAACAACGATATCTCAAACCTAGCTGCCCTGACAGGGGGTATTACTGGGTTAACTACAGGCACGGCGGCAGCCTCTGGTATTGTTGGAGAGGTGGCTTCCGCTGCGTCTAGTTCTGCTACTAACCTTGTATCTGGTAGCGTTATTAATATTATCAGCCTTAGTTTACCTGCGGGCGATTGGGAACTGGAAAGTGCTTTCCAAATCATAAACACAGGTAATGTGACCGCCCTAGCCTTTGGTGTCAGCACCACCACAGGGGTGTTACCTACTCCGTGGTATGACGTGTACAGCATCACCACTACGATTGGTTCAGGGACTTCGAACAGGCAGGGTATGGCAAGACGAGTACTACTAAGCACCACCACCACTGTGTACCTTGTAGCACAGGCGACCTTTACAGGTACAGCTACCGCTAATGGGTACGTACGCGCGAGGCGAGTTAGATAA

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State