Protein

Experimentally validated
View in Explore
Genbank accession
AFQ22529.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,002
C6 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MYSVQIAVSDGTLTRIALSIEYFEKDDITLYRNLELTPLVLGTDWQWDGDTHINLLTGIPVPVGSYITVRRNTDIDRAFNIYDGGAAFNRETLDENFKQMIYLAQEFTEGNGLTGLYFPLDMHGFQIKNLGEPTDPGDAVTKQYVDTANTAQNANFNASQQAQDQAVAASQAVQDNRLASLENTFVQATSSYPWYTVSTSTTDTFTPGFNFTKAAVYINGVCQTPDYSYIVVANQILLADPVPLGTMVFARLGEDIQNDDDFATTAQLSAVQANLQDEIDVTNTEVSNKASKGANSDISSLSGLTTPLSAAQGGTGNNTGNAATATVLATPRTIQTNLASTSAASFNGSANITPGVTGNLPVTNGGTGAGSAPSARANLGAAMNGINNDISNLAALTGGITGLTTGTAAASGIVGEVASAASSSATNLVSGSVINIISLSLPAGDWELESAFQIINTGNVTALAFGVSTTTGVLPTPWYDVYSITTTIGSGTSNRQGMARRVLLSTTTTVYLVAQATFTGTATANGYVRARRVR
Physico‐chemical
properties
protein length:534 AA
molecular weight: 55826,02600 Da
isoelectric point:4,35548
aromaticity:0,07491
hydropathy:-0,04457

Domains

View on InterPro
Domain architecture
AFQ22529.1
1 534 aa
ATT 3–108 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AFQ22529.1
1 534 aa
Domain Start End Length (AA) Confidence
N-terminal 1 325 325 0,9883
Central domain 326 523 199 0,1298
C-terminal 524 534 10 0,9986
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pectobacterium phage PhiM1 [NCBI] · taxon 1211386
Uroviricota Caudoviricetes Autographivirales Autoscriptoviridae Phimunavirus Phimunavirus fM1
Host
Pectobacterium atrosepticum SCRI1043 [NCBI] · taxon 218491
Pseudomonadota Gammaproteobacteria Enterobacterales Pectobacteriaceae Pectobacterium Pectobacterium atrosepticum

Coding sequence (CDS)

Genbank protein accession
AFQ22529.1 [NCBI]
Genbank nucleotide accession
JX290549 [NCBI]
CDS location
range 35998 -> 37602
strand +
CDS
ATGTACTCAGTCCAGATTGCCGTATCAGACGGTACTCTAACTCGAATTGCACTGAGCATCGAGTACTTTGAGAAAGATGATATCACGCTGTACCGTAATCTGGAACTGACCCCACTTGTACTGGGTACTGATTGGCAATGGGATGGGGATACCCACATCAACTTGCTGACTGGTATCCCAGTACCAGTAGGTAGCTACATTACTGTACGCCGTAATACAGATATTGACCGTGCCTTTAATATTTATGACGGGGGTGCGGCGTTTAACCGAGAAACCCTTGATGAGAACTTCAAGCAGATGATTTACCTTGCGCAGGAGTTCACTGAGGGTAATGGACTTACCGGCCTGTACTTCCCATTGGATATGCACGGTTTTCAGATTAAGAACTTGGGGGAACCTACCGACCCTGGGGATGCGGTTACTAAACAGTACGTAGATACTGCTAATACTGCACAGAATGCTAACTTTAATGCTAGTCAACAGGCGCAGGACCAAGCAGTAGCCGCATCGCAGGCTGTACAAGATAATCGGTTAGCCTCCCTTGAGAATACTTTCGTTCAGGCCACTTCTAGTTATCCGTGGTACACAGTGAGCACTAGTACGACGGACACGTTCACACCCGGCTTTAACTTCACCAAGGCAGCAGTGTACATCAACGGAGTATGCCAGACACCGGACTACAGTTACATCGTAGTGGCTAATCAGATACTCCTTGCAGACCCCGTGCCACTAGGCACGATGGTCTTTGCCCGGCTAGGGGAAGACATTCAGAACGATGATGATTTTGCCACTACTGCACAGCTTAGTGCGGTACAGGCAAACCTACAGGATGAGATTGATGTCACTAACACAGAGGTTAGTAACAAGGCTAGTAAGGGTGCAAACTCCGATATTAGCAGCCTGTCTGGTTTAACCACGCCACTTAGTGCTGCACAGGGTGGAACGGGGAACAACACGGGGAATGCTGCGACAGCAACTGTACTTGCTACCCCCCGAACAATCCAGACTAACCTAGCCAGCACTAGCGCTGCGAGTTTTAATGGTTCAGCTAACATTACACCGGGCGTAACTGGAAATCTCCCAGTTACTAATGGGGGTACCGGGGCTGGCTCCGCACCTAGCGCACGTGCTAACCTCGGCGCAGCTATGAATGGTATCAACAACGATATCTCAAACCTAGCTGCCCTGACAGGGGGTATTACTGGGTTAACTACAGGCACGGCGGCAGCCTCTGGTATTGTTGGAGAGGTGGCTTCCGCTGCGTCTAGTTCTGCTACTAACCTTGTATCTGGTAGCGTTATTAATATTATCAGCCTTAGTTTACCTGCGGGCGATTGGGAACTGGAAAGTGCTTTCCAAATCATAAACACAGGTAATGTGACCGCCCTAGCCTTTGGTGTCAGCACCACCACAGGGGTGTTACCTACTCCGTGGTATGACGTGTACAGCATCACCACTACGATTGGTTCAGGGACTTCGAACAGGCAGGGTATGGCAAGACGAGTACTACTAAGCACCACCACCACTGTGTACCTTGTAGCACAGGCGACCTTTACAGGTACAGCTACCGCTAATGGGTACGTACGCGCGAGGCGAGTTAGATAA

Genome Context

Tertiary structure

AFQ22529.1
1 / 2
Structure ID
Source
Method
Resolution
Oligomeric state

Experimental validation

Experimentally validated

A wet-lab result is recorded for this protein, or for its sequence: a solved structure, an experimental GO annotation, a UniProt ECO:0000269 assertion, or a GenBank /experiment= qualifier.

Tier Source Assay Claim Reference
Experimentally validated PDB
8VBX
 structure:EM — ECO:0000006
Validated by sequence identity UniProt
A0A1P7WFW3
 protein_existence:evidence_at_protein_level 1: Evidence at protein level —

Rows marked “Validated by sequence identity” come from a different entry carrying the same sequence — the experiment was not performed on this protein.