Protein

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Genbank accession
YP_009806295.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 0,70
TF
Evidence RBPdetect
Probability 0,51
TSP
Evidence RBPdetect2
Probability 0,59
Seq2Symm
C3 confidence 0,847
C3 0,847
C1 0,357
C2 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MKLNVGEIRGLLANSYNITVPSETSISFETGAQLTHTTLGTSHMVVPYGTTTEWDNQVRVHQKDFLNGQMRWNTTDQQLQFYYNGWMNMVSGIAVGDIGSQTNPAVDGNAIYRAGKSSGIYWIQPEGQSAYQMYVNNDDNGGGWVLCVHARTSTCQDHMTTGSVRISGTTGPRTNNTSTTKMADSWIQALRNSSSYTGTTAYWMHALDFGPKNVFISSAATVNLNNSASEDNPRTRISTTYQGGLSDRGPNTGTRGFGDHHTSGGTYFAYGRHPESGNNCGFREDTNGASNGYLWVK
Physico‐chemical
properties
protein length:297 AA
molecular weight: 32438,11790 Da
isoelectric point:6,48939
aromaticity:0,10101
hydropathy:-0,61919

Domains

View on InterPro
Domain architecture
YP_009806295.1
1 297 aa
STR 107–155 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009806295.1
1 297 aa
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,0010
Central domain 198 286 90 0,1087
C-terminal 287 297 10 0,9811
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Cyanophage S-TIM4 [NCBI] · taxon 1048189
Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Thaumasvirus Thaumasvirus stim4
Host
Synechococcus sp. [NCBI] · taxon 1131
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp.

Coding sequence (CDS)

Genbank protein accession
YP_009806295.1 [NCBI]
Genbank nucleotide accession
NC_048015 [NCBI]
CDS location
range 30903 -> 31796
strand +
CDS
ATGAAACTCAACGTTGGGGAAATAAGAGGATTACTAGCAAACAGTTATAATATAACTGTTCCTTCAGAGACTTCAATTAGTTTTGAAACTGGAGCTCAATTAACGCATACTACTTTAGGAACCAGTCACATGGTAGTTCCTTATGGCACTACTACAGAGTGGGATAATCAAGTAAGAGTTCATCAAAAAGATTTTTTGAATGGACAAATGCGATGGAATACAACAGACCAACAACTCCAATTTTATTACAATGGTTGGATGAATATGGTGTCTGGTATTGCTGTAGGAGATATCGGAAGTCAAACAAACCCTGCAGTAGATGGAAATGCAATATATAGAGCAGGTAAATCAAGTGGTATATATTGGATTCAACCAGAGGGGCAGTCAGCATATCAAATGTATGTTAATAATGATGATAATGGAGGTGGTTGGGTATTATGTGTTCATGCAAGGACATCAACCTGTCAAGATCATATGACTACAGGATCAGTCAGAATTAGCGGAACTACAGGTCCTAGAACAAATAATACATCTACAACTAAGATGGCGGACAGTTGGATTCAAGCATTACGCAATAGTTCCAGTTATACTGGCACTACTGCATATTGGATGCACGCATTAGATTTCGGTCCTAAGAACGTTTTTATTTCAAGTGCAGCAACTGTAAATTTGAATAATAGTGCTTCTGAAGATAATCCTAGAACTAGAATCTCTACTACATATCAAGGGGGTCTCTCTGACAGAGGTCCTAATACAGGAACTAGAGGTTTCGGAGATCACCATACTTCTGGTGGAACATATTTTGCATACGGTAGACACCCTGAGTCAGGTAACAACTGTGGATTCAGAGAAGATACTAACGGTGCATCAAACGGATACTTATGGGTAAAGTAA

Genome Context

Tertiary structure

YP_009806295.1
ESMFold structure
Source ESMFold
pLDDT 59.9
Oligomeric state monomer
Download structure