Protein

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Genbank accession
YP_009806295.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 0,70
TF
Evidence RBPdetect
Probability 0,51
Protein sequence
MKLNVGEIRGLLANSYNITVPSETSISFETGAQLTHTTLGTSHMVVPYGTTTEWDNQVRVHQKDFLNGQMRWNTTDQQLQFYYNGWMNMVSGIAVGDIGSQTNPAVDGNAIYRAGKSSGIYWIQPEGQSAYQMYVNNDDNGGGWVLCVHARTSTCQDHMTTGSVRISGTTGPRTNNTSTTKMADSWIQALRNSSSYTGTTAYWMHALDFGPKNVFISSAATVNLNNSASEDNPRTRISTTYQGGLSDRGPNTGTRGFGDHHTSGGTYFAYGRHPESGNNCGFREDTNGASNGYLWVK
Physico‐chemical
properties
protein length:297 AA
molecular weight: 32438,11790 Da
isoelectric point:6,48939
aromaticity:0,10101
hydropathy:-0,61919

Domains

Domains [InterPro]
IPR014716
Unmapped
56–186
IPR014716
IPR036056
STR
107–149
IPR036056 DC_0434
IPR036056
STR
107–155
IPR036056
NF040941
Unmapped
115–146
NF040941
YP_009806295.1
1 297
Architecture
STR
STR 107-297
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009806295.1
1 297
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,0010
Central domain 198 286 90 0,1087
C-terminal 287 297 10 0,9811
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-197
Central
198-286
C-terminal
287-297

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM4
[NCBI] 		1048189 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009806295.1 [NCBI]
Genbank nucleotide accession
NC_048015 [NCBI]
CDS location
range 30903 -> 31796
strand +
CDS
ATGAAACTCAACGTTGGGGAAATAAGAGGATTACTAGCAAACAGTTATAATATAACTGTTCCTTCAGAGACTTCAATTAGTTTTGAAACTGGAGCTCAATTAACGCATACTACTTTAGGAACCAGTCACATGGTAGTTCCTTATGGCACTACTACAGAGTGGGATAATCAAGTAAGAGTTCATCAAAAAGATTTTTTGAATGGACAAATGCGATGGAATACAACAGACCAACAACTCCAATTTTATTACAATGGTTGGATGAATATGGTGTCTGGTATTGCTGTAGGAGATATCGGAAGTCAAACAAACCCTGCAGTAGATGGAAATGCAATATATAGAGCAGGTAAATCAAGTGGTATATATTGGATTCAACCAGAGGGGCAGTCAGCATATCAAATGTATGTTAATAATGATGATAATGGAGGTGGTTGGGTATTATGTGTTCATGCAAGGACATCAACCTGTCAAGATCATATGACTACAGGATCAGTCAGAATTAGCGGAACTACAGGTCCTAGAACAAATAATACATCTACAACTAAGATGGCGGACAGTTGGATTCAAGCATTACGCAATAGTTCCAGTTATACTGGCACTACTGCATATTGGATGCACGCATTAGATTTCGGTCCTAAGAACGTTTTTATTTCAAGTGCAGCAACTGTAAATTTGAATAATAGTGCTTCTGAAGATAATCCTAGAACTAGAATCTCTACTACATATCAAGGGGGTCTCTCTGACAGAGGTCCTAATACAGGAACTAGAGGTTTCGGAGATCACCATACTTCTGGTGGAACATATTTTGCATACGGTAGACACCCTGAGTCAGGTAACAACTGTGGATTCAGAGAAGATACTAACGGTGCATCAAACGGATACTTATGGGTAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73a7cc99e19970a3d9a873c3fe003780fcf6bc7adf346409d7d4d7ef0c444ca3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50