Protein

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Genbank accession
CAB4167980.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAITCFPFDGTGDGSVVTEGQWASMARLWSSDGVVPGYLNELAVSNFATNSFSVTVGTGSAWVGGHYISNSSSVTVNVDATGSHIWPDTVNSGNVLAIFAVVIQLDWQLNQVTFRLMRGGSQPSTGAAALYPPALVRVPEVLWQFPLAYFFANTSYSSGISQTTVDYLSQSWPVNATKLLSATTNTPNKIVDTRIYLPTYAPHYTSYANVDSIAASGASAANFQMSNGGIVLRKSGVPNSPGTGSLILYAKSDNTLAFKVNASTTEYVVLTGGQSTIGSTGATGPTGPTGATGITGATGTNVSSVSLITSDPVNLTTYGTATSALSASGVLSLTLPKGLTGSQGLTGATGLTGITGATSVIPGATGETGVTGATGLQGSPGPAASVGATGITGATGATGFTGATGPTGATGIIGSTGATGPTGLTGPTGATGLTGATSTVVGPTGITGATGTTGATGADSTVPGATGITGATGLMGYTGADSTVPGPTGATGITGATGADSTVAGPSGPSGPSGPIGLTGPQGPQGTTGSAGVATFARTLLLMGI
Physico‐chemical
properties
protein length:545 AA
molecular weight: 52830,91980 Da
isoelectric point:4,87607
aromaticity:0,06239
hydropathy:0,19303

Domains

Domains [InterPro]
IPR050149
277–531
IPR050149
IPR008160
387–435
IPR008160
CAB4167980.1
1 545
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4167980.1 [NCBI]
Genbank nucleotide accession
LR796811 [NCBI]
CDS location
range 65638 -> 67275
strand +
CDS
ATGGCTATAACATGTTTTCCATTTGATGGAACTGGAGACGGTTCTGTAGTAACTGAAGGACAGTGGGCTTCTATGGCTAGACTTTGGTCTAGTGATGGAGTTGTCCCCGGATACCTCAATGAATTAGCAGTTTCTAATTTCGCTACTAATTCTTTTTCAGTTACTGTCGGAACAGGATCGGCATGGGTAGGCGGACATTACATATCTAATTCTTCTTCAGTCACCGTAAATGTTGATGCTACTGGATCGCACATTTGGCCCGACACAGTAAATTCAGGAAATGTTCTTGCTATTTTTGCAGTTGTCATTCAGTTAGATTGGCAACTTAATCAGGTAACTTTCAGGTTAATGCGTGGTGGATCGCAACCGAGTACAGGAGCGGCCGCGCTGTATCCTCCCGCGCTGGTAAGAGTACCAGAAGTTTTGTGGCAGTTTCCTTTAGCGTATTTTTTTGCTAACACTTCGTATAGTAGCGGTATTAGTCAAACTACAGTCGATTACTTGTCGCAATCTTGGCCCGTAAATGCCACTAAATTGCTTTCTGCAACCACCAATACTCCAAATAAAATCGTAGACACAAGAATTTATCTCCCTACTTACGCGCCACATTACACCTCATACGCAAACGTCGATTCTATTGCTGCTTCTGGCGCAAGTGCTGCTAATTTCCAGATGAGTAATGGCGGAATTGTACTCAGAAAAAGTGGCGTTCCTAACTCTCCCGGTACAGGAAGTCTTATTTTATACGCAAAAAGTGACAACACTCTTGCGTTTAAGGTAAATGCTAGTACGACTGAATACGTTGTTCTTACAGGTGGTCAAAGTACAATCGGTTCCACTGGTGCGACCGGCCCAACCGGCCCAACTGGCGCTACGGGAATAACCGGCGCTACTGGAACTAATGTCTCTTCTGTAAGTCTTATTACATCCGATCCAGTAAATTTAACTACTTACGGAACTGCAACAAGTGCGCTTAGTGCTTCTGGTGTACTCTCACTTACGCTTCCTAAAGGCTTGACAGGTTCTCAGGGATTGACCGGCGCGACTGGCCTTACGGGAATCACTGGCGCTACTTCTGTAATTCCCGGCGCGACTGGCGAAACTGGCGTAACTGGCGCAACTGGATTACAAGGTTCTCCCGGCCCTGCGGCAAGCGTTGGAGCGACAGGAATCACTGGCGCTACCGGAGCAACTGGTTTTACCGGAGCAACTGGCCCTACCGGCGCTACGGGAATAATCGGTTCCACTGGAGCAACTGGCCCAACGGGACTAACTGGCCCTACCGGCGCTACTGGTTTGACAGGTGCCACTTCGACAGTTGTTGGCCCGACAGGGATTACCGGCGCTACTGGAACAACCGGCGCTACTGGTGCGGATTCAACAGTTCCCGGCGCTACAGGAATAACCGGCGCTACTGGTTTGATGGGGTACACTGGCGCGGACTCAACAGTTCCCGGCCCAACCGGCGCTACGGGAATAACCGGCGCTACTGGCGCGGATTCAACAGTTGCTGGCCCGTCTGGCCCGTCTGGCCCGTCTGGCCCAATTGGTTTGACTGGCCCGCAAGGCCCGCAAGGCACGACTGGTTCAGCAGGTGTCGCTACTTTTGCGCGAACTCTTCTTTTGATGGGAATATAA

Tertiary structure

PDB ID
c1bf6bd10a7a4f23ad89f12dc1836f69ec7b2acc2ed4683b27c3cffa74559278
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5837
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50