Protein

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Genbank accession
YP_004300888.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,52
Seq2Symm
C3 confidence 0,991 truncated
C3 0,991
C1 0,286
I 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAANIAFRVTDGLDAAGKSIINVGYPDITAPLDGVNVKFFIDENTIQQYDKARTYKKDFAVIYNNRVYVSLVNITTPEDFNPIRWRPVRTDPSWRLVTTNAPALTTIQSGEHIIVQSTVQDIRFTLPAQALNGDMVVIRDNGTNLHDFTVDVDGNGRTISGVAVFKITAPYSAVYFILSGSEWIAQVEYRGDTNKKIISNSSYLAGSYYKAMVGDQLMRETQYSGGIKIGLPKYANHGDTVTTYDLDGMNPVTKTTISVHPDSTHNIIVIAGQPSVKTAQFDSTDWGILVFDRNANAWRVFDSDSMSRWKSVKTATYSSSPNDQLVVYTQTSTEVKITFPKDAANGDSLFVDTRYMVNGSSLTLSIDAGSTNDYFLPDGNTLTNPRISAYRDLLTDLPSHITKTQTFAINNRGEQMEFVYFKNALGSGNDVWALVTMTTIPYRVDRTVPDFYGMASIASQASVNKNKEDIPLVKTQIVRISLLQKPLANKTATGTRRGIIRLSTNLESKATTGNLNDEAWSGVAITPFLLNDRLGTTSMRGVFKVATQAQANAQSGSGENWGQVAITPQTLAGRISTETMPGLIGLVNFGGTKQPTRTTKGTGVHDFTDHSNAVTPKTLFEKVATEFSQGMVFVGNQNEVNTGAADNANGPLVVTATTLNGRQATSAMTGLTRAATAAEVISMAPPADDNVHVTPKGLVSRTATETRTGLGETSTQAEVDAGTLHDRFFVSPKTFGNWLVRERLTVVADDGLTSTGNIWQGQQFGVVVPTEIQRGTARIATQAESNDMSVGSRDDVILTPRKLSARMASTSQTGILYLATQGDVDTGTNNTKAVTPLTNLNSVRSGTSYRMTDARYGVGMTAVLTNNNVANSVFEGNDIAGSTRTLSSYAHGDIVVSPRGLNTALMNFLPKRAVAVSADAMDEGGVRVPSSDWVRRTIAQTITGVMTFSANPLISGNGAALTLVDERGTSQITMLTYKGGVTSQQLDIGVNAVDGPLVVNAKDAGGSYYRVWTLNRNGNAVFTNNVSNGGFDPTHNDHLTRYGYTEIRYVKAAGGVNETITGQKTFNADTYFKKNGVHNIWMGNTSKSGISIGLDESISFGSLNGLSIRPNGLASPANVSRFEPNGDLRVSGQVKIMTTTPVEPEDAIRKDYLDSVIDDVNNTSGTRVFKGGDTMTGELIINSIKALTANGDVAVSGTTTLNKLRIAVGNGEFLEIRANPVTKSVDFVWIS
Physico‐chemical
properties
protein length:1231 AA
molecular weight: 132548,87940 Da
isoelectric point:6,44591
aromaticity:0,07392
hydropathy:-0,23558

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_004300888.1
1 1231 aa
Domain Start End Length (AA) Confidence
N-terminal 1 364 364 0,6419
Central domain 365 586 223 0,1228
C-terminal 587 1231 644 0,4077
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Aeromonas phage 65 [NCBI] · taxon 2919549
Uroviricota Caudoviricetes Pantevenvirales Straboviridae Ishigurovirus Ishigurovirus osborne
Host
Aeromonas salmonicida [NCBI] · taxon 645
Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas salmonicida

Coding sequence (CDS)

Genbank protein accession
YP_004300888.1 [NCBI]
Genbank nucleotide accession
NC_015251 [NCBI]
CDS location
range 39287 -> 42982
strand -
CDS
ATGGCAGCAAACATTGCTTTTAGAGTTACGGATGGCTTAGATGCCGCTGGTAAGTCTATCATAAACGTTGGTTACCCAGATATAACAGCTCCTTTAGATGGAGTTAACGTAAAGTTTTTTATTGATGAAAATACAATTCAACAATATGACAAAGCCCGCACGTATAAGAAGGACTTTGCGGTTATTTATAACAACCGAGTTTATGTTAGTTTGGTAAATATTACAACCCCAGAAGATTTTAACCCTATTAGATGGCGTCCGGTTCGTACCGATCCATCTTGGAGACTTGTAACAACTAACGCACCAGCTCTTACAACGATTCAATCGGGCGAGCATATCATAGTTCAATCTACAGTACAAGACATAAGATTTACGCTACCGGCTCAAGCTCTTAATGGTGATATGGTAGTTATCCGTGATAATGGAACAAACCTACACGATTTTACCGTTGATGTTGATGGAAATGGAAGAACCATTTCTGGCGTTGCGGTATTCAAAATCACCGCTCCATATTCTGCGGTATATTTTATTTTGAGTGGTAGTGAGTGGATCGCACAAGTAGAGTACCGAGGCGACACAAACAAGAAAATTATAAGCAATAGTTCATATCTGGCAGGTTCTTACTACAAGGCTATGGTCGGGGATCAACTAATGCGGGAAACCCAATATTCCGGAGGAATAAAGATAGGTTTGCCCAAATATGCAAATCATGGAGATACCGTAACAACTTACGATCTCGATGGTATGAACCCTGTAACGAAAACAACAATATCAGTTCATCCAGATAGTACGCATAACATAATTGTTATTGCAGGTCAACCATCTGTTAAAACTGCTCAATTTGATTCCACCGATTGGGGTATCCTAGTTTTTGACCGTAACGCTAACGCTTGGAGAGTTTTCGACTCTGACAGTATGAGTCGTTGGAAAAGTGTAAAAACCGCAACTTACAGTTCTTCTCCGAATGACCAGTTGGTAGTATACACACAAACCTCAACTGAAGTAAAGATAACTTTTCCAAAAGATGCGGCAAACGGGGATAGTCTGTTTGTTGACACACGATATATGGTCAACGGTTCTAGCTTAACCTTGTCTATTGATGCAGGAAGTACCAACGATTATTTCTTACCTGATGGAAATACGTTGACAAATCCTAGAATTAGTGCATATAGAGATCTACTTACCGACCTTCCTAGTCACATTACAAAAACCCAGACATTTGCCATTAATAACCGTGGCGAACAGATGGAATTTGTATACTTTAAAAATGCGTTAGGATCTGGAAATGATGTGTGGGCACTAGTGACCATGACAACAATTCCATACCGAGTAGATAGAACCGTTCCAGATTTTTATGGTATGGCTTCGATTGCATCACAAGCTAGTGTTAACAAAAATAAAGAAGATATTCCACTGGTCAAAACCCAGATTGTGAGGATTTCGTTACTTCAGAAACCTTTAGCTAACAAAACGGCAACAGGAACCAGACGTGGTATAATTAGATTATCTACTAACCTAGAATCAAAAGCAACTACCGGAAACCTGAATGATGAAGCTTGGTCGGGTGTAGCAATTACCCCGTTTCTACTAAATGACCGGTTAGGAACTACCTCAATGAGAGGTGTGTTTAAGGTTGCTACTCAAGCACAAGCTAACGCGCAGTCAGGATCTGGCGAAAACTGGGGTCAGGTTGCAATTACTCCACAAACATTAGCAGGTCGTATATCTACCGAGACTATGCCGGGTTTGATTGGTCTTGTCAATTTTGGTGGAACAAAACAACCAACTAGAACCACTAAAGGTACTGGGGTTCATGACTTCACAGACCATTCTAATGCAGTAACTCCTAAAACCCTGTTTGAAAAGGTAGCAACTGAATTCTCCCAAGGGATGGTATTCGTTGGTAACCAAAACGAGGTTAACACAGGTGCGGCTGATAATGCAAATGGTCCGTTGGTAGTTACTGCAACCACTTTAAACGGTCGTCAAGCAACGTCAGCCATGACCGGTTTGACTCGGGCAGCAACTGCGGCTGAAGTGATTAGCATGGCTCCACCGGCTGATGACAACGTGCATGTAACCCCGAAAGGTTTGGTTAGCCGTACCGCAACAGAAACCAGAACCGGTTTGGGTGAAACCTCTACCCAAGCAGAAGTAGATGCAGGAACCCTACACGATAGATTCTTTGTGTCTCCTAAAACTTTTGGAAACTGGTTGGTTCGTGAGCGTCTAACTGTTGTCGCGGATGACGGTCTTACTTCTACAGGAAATATCTGGCAAGGTCAACAGTTTGGTGTTGTTGTACCTACAGAAATCCAAAGAGGAACTGCTAGAATCGCCACACAAGCAGAGTCAAATGATATGTCTGTTGGTTCTAGAGACGATGTGATCTTGACTCCTAGAAAGCTTTCGGCGCGTATGGCTTCAACAAGCCAGACTGGTATATTGTACTTAGCCACACAAGGTGATGTTGATACCGGTACAAATAACACCAAGGCAGTAACACCTTTGACTAATCTGAACTCGGTCAGATCCGGTACTAGTTACCGAATGACAGATGCCAGATATGGTGTTGGTATGACTGCGGTATTGACGAACAATAACGTGGCGAATTCCGTGTTTGAAGGTAACGACATTGCTGGTTCTACTCGGACTCTTTCAAGTTATGCCCATGGGGACATTGTTGTATCTCCTAGAGGATTAAACACAGCTCTTATGAACTTTTTACCTAAACGGGCTGTTGCGGTTAGTGCGGATGCAATGGATGAGGGTGGTGTTAGAGTTCCTTCTTCAGATTGGGTTCGTAGAACTATCGCTCAGACAATTACCGGAGTTATGACATTTAGTGCTAACCCGTTAATATCTGGTAATGGTGCAGCCCTTACATTGGTGGATGAACGTGGTACTTCACAGATAACCATGTTGACCTATAAAGGTGGGGTAACTAGCCAACAACTTGATATAGGTGTTAATGCGGTTGATGGTCCGTTAGTTGTTAACGCTAAAGATGCCGGAGGTTCATATTACCGAGTATGGACACTAAACAGAAATGGTAATGCGGTATTTACAAATAACGTTTCAAATGGTGGATTTGACCCGACTCATAATGATCACTTAACTCGTTACGGTTACACCGAAATTCGTTATGTTAAGGCTGCGGGTGGAGTTAACGAAACTATTACTGGTCAGAAAACATTCAACGCAGATACTTACTTTAAGAAAAATGGTGTTCACAATATCTGGATGGGTAATACATCTAAGAGTGGAATAAGTATAGGTCTTGATGAAAGTATATCATTTGGTTCTCTAAATGGATTGTCTATCCGTCCAAACGGATTGGCTTCTCCTGCAAACGTGAGTCGATTTGAACCTAACGGAGATCTACGGGTTTCTGGTCAGGTTAAAATAATGACCACTACCCCAGTTGAACCAGAAGACGCGATCCGTAAAGATTACCTCGACTCTGTGATCGATGATGTTAATAACACATCCGGAACTCGGGTATTCAAGGGCGGTGATACTATGACCGGAGAGTTGATCATCAACTCTATAAAGGCATTGACTGCAAATGGAGACGTTGCGGTTTCTGGAACTACAACCCTAAATAAACTTAGGATAGCAGTTGGTAACGGGGAATTCTTAGAGATAAGAGCAAACCCAGTAACCAAGTCTGTAGACTTTGTTTGGATTAGTTAA

Genome Context

Tertiary structure

YP_004300888.1
ESMFold structure
Source ESMFold
pLDDT 54.5
Oligomeric state monomer
Download structure