Protein

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Genbank accession

YP_009196393.1 [GenBank]

Protein name

long tail fiber protein proximal connector

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,53

Seq2Symm

C1 confidence 0,996

C1	0,996
C2	0,026
I	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKFAEIRGSGLGSVIAENNSTKYYIKVTGSHSDLATENRISEVVINDSVISVSPLRGMNIQRFDNNMQFVESRSFDLYGSLTEQSSIMSEYIRSVTSGVLILYSYDAMGNNTVINELMKIYGASAWPWHINSTKRFAWCGIIDCKNSNMISDAMGGLGNSYFASLDYYIDTMEDMGVTGAGNVIIQDPNEYSGKQYLVKTYMEKTPLSELKQLKVGEWIYLRADLMHDNESVTNKITGVMTVQFYDQTSSYLKGITIRSNSTSYKTIEARSDIPANAFYVDIKYLHSPSGSDGTGTVSIKNVVVQPIAKEIVKNKPARLGRYTAPAREFREGTTTGNTVVRFTKDELIEASEMQEILGNEWIKVFEHRTLNGPYLFEDLQQALYSEIPYLYSNMKEINDFRLKDGKWRFKLVYDEGHIVWEQSSSPELSTVTGLKIIETTLSADSRPFGGIRRTVNDTNSRYDCNTGSTWYYAIGAIAVYGSGFPGPKGTVNSVQLYAWKE

Physico‐chemical properties

protein length:	501 AA
molecular weight:	56279,76970 Da
isoelectric point:	5,61276
aromaticity:	0,10978
hydropathy:	-0,33992

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_009196393.1

1 501 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	56	56	0,4102
Central domain	57	263	208	0,6469
C-terminal	264	501	237	0,4066

Note: Constraints were applied during segmentation.
Fixed 24 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage

Cronobacter phage S13 [NCBI] · taxon 1327935

Uroviricota Caudoviricetes Pantevenvirales Straboviridae Cronobacter phage S13

Host

Cronobacter sakazakii [NCBI] · taxon 28141

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Cronobacter Cronobacter sakazakii

Coding sequence (CDS)

Genbank protein accession

YP_009196393.1 [NCBI]

Genbank nucleotide accession

NC_028773 [NCBI]

CDS location

range 8039 -> 9544
strand -

CDS

ATGAAATTTGCAGAAATTCGAGGCTCCGGCCTCGGTTCTGTTATCGCTGAAAACAACAGCACAAAATATTACATTAAGGTGACCGGATCTCATTCAGACCTAGCCACCGAAAATCGTATTAGTGAAGTTGTAATTAACGATAGCGTAATCAGCGTTTCTCCTTTAAGAGGAATGAACATCCAGCGTTTTGATAACAATATGCAATTTGTTGAAAGTAGAAGTTTTGATCTTTACGGTAGTTTAACCGAACAGTCTTCTATTATGAGCGAATACATTCGTTCTGTGACATCAGGAGTTCTTATTCTGTATTCATACGATGCAATGGGAAATAACACAGTCATAAACGAATTGATGAAAATCTATGGCGCTTCTGCTTGGCCTTGGCATATCAATTCAACAAAAAGATTTGCATGGTGTGGAATTATAGATTGCAAAAACAGTAATATGATCTCAGATGCGATGGGAGGATTGGGAAATAGTTATTTCGCGTCGTTGGATTATTACATAGACACGATGGAAGATATGGGTGTTACAGGTGCTGGTAATGTTATTATTCAAGATCCTAATGAGTATTCAGGAAAACAGTATCTCGTCAAGACTTATATGGAAAAAACTCCTCTGTCAGAATTAAAACAGCTTAAAGTAGGAGAATGGATTTATCTGAGAGCCGATTTAATGCATGACAATGAATCGGTGACAAATAAAATAACAGGTGTTATGACCGTTCAGTTTTACGATCAGACTAGCTCATATCTGAAAGGAATAACAATTCGTTCTAATTCAACATCTTACAAAACTATTGAAGCTAGATCTGATATTCCAGCGAATGCCTTTTATGTTGATATTAAGTATTTGCATAGTCCATCGGGTTCAGACGGAACCGGAACAGTTTCAATTAAAAACGTTGTCGTTCAACCGATCGCAAAAGAAATCGTCAAGAATAAACCAGCTCGTCTGGGACGATATACTGCACCAGCTCGTGAATTCCGCGAAGGGACTACAACAGGAAACACAGTTGTTAGATTTACTAAAGACGAACTCATCGAAGCGTCGGAAATGCAGGAGATACTGGGAAATGAATGGATAAAAGTGTTTGAGCACAGAACATTGAACGGTCCTTATTTGTTTGAAGATCTTCAACAGGCACTTTATTCTGAAATTCCTTATTTGTATAGCAACATGAAAGAAATCAACGATTTTAGACTTAAAGACGGAAAATGGAGATTTAAACTCGTATACGATGAAGGACATATTGTATGGGAACAAAGTTCGTCTCCTGAACTATCGACTGTCACTGGATTAAAAATAATTGAAACAACACTTTCGGCAGACTCTAGACCTTTCGGGGGAATCAGAAGAACGGTGAACGATACAAACTCTCGATATGACTGTAATACAGGTTCAACATGGTATTATGCAATAGGTGCCATAGCAGTTTATGGAAGTGGATTTCCTGGACCGAAAGGAACTGTAAATAGTGTTCAGCTATACGCATGGAAGGAGTGA

Genome Context

Tertiary structure

YP_009196393.1

ESMFold structure

Source ESMFold

pLDDT 57.7

Oligomeric state monomer

Download structure

Literature

Title	Authors	Date	PMID	Source
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage S13	Kim,Y., Shin,H. and Ryu,S.	2012-06	—	GenBank