Protein

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Genbank accession
CAL9980818.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MSYSQSTTQSPAVLNKENGAEKVGFKYGENVLSYLSIRESFSDYFAAFCEKVARDSGTIKITCRGDSLTYGEDNVVSQREADPAATPEGRTHTSLRANETYPEALQRFLRQVFSATVNVVNQGYSGDNTDDSFLDWTTNENADVCFIMLGTNDAAEGFSPYQSLEQYAEKYRRIILREFSRETAVVLITSPEQKQVNGNTRLLEAYRQKVFALGNEFGVPVIDGWEIFRNSDSVVWADNVHFKTAGYQLLAAKVAAFVMGRGNNYQTVYSGSNLTTRLGENSIKAKLSNWGIQTAKGGQNTPPLSSFSGGYVTETSNYGEYIVFYFYAAIDDLIVTPNVNVENARLNIALDFGADAQPQYTFDDKVWEDTDPDRTAKPAHTTTINAFDSEVFIDNLTEYATIKDVRIHIASKGWHSIRFDISNNGSTTGTPRLTVGGLSFLDYSTQRLVDRKNLNISGNQTPVGNVTPEYLGQEYLDTSPGVGEWFKAVGLTSANWKKINYKVEDYNQSDTQSPIGNVTPRFLGDEYLDTSSGQYHWYKATGLTSNDWKQTTN
Physico‐chemical
properties
protein length:553 AA
molecular weight: 61598,07870 Da
isoelectric point:4,91199
aromaticity:0,11754
hydropathy:-0,50687

Domains

Domains [InterPro]
SSF52266
STR
59–259
SSF52266 DC_0867
IPR036514
STR
60–260
IPR036514
IPR045136
Unmapped
62–266
IPR045136
IPR013830
ENZ
65–249
IPR013830
DC_1090
RBD
139–500
DC_1090
CAL9980818.1
1 553
Architecture
STR
RBD
RBD
STR 59-260 | RBD 261-500 | RBD 502-553
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9980818.1
1 553
Domain Start End Length (AA) Confidence
N-terminal 1 40 40 0,9831
Central domain 41 289 250 0,5273
C-terminal 290 553 263 0,3046
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-40
Central
41-289
C-terminal
290-553

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D526
[NCBI] 		3105286 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9980818.1 [NCBI]
Genbank nucleotide accession
OZ195944.1 [NCBI]
CDS location
range 4071 -> 5732
strand +
CDS
ATGAGTTATTCACAAAGTACAACACAAAGCCCCGCAGTATTAAATAAAGAAAACGGCGCTGAAAAAGTCGGCTTTAAATACGGCGAAAACGTGCTTTCATATTTGTCTATCCGAGAAAGCTTTAGTGATTATTTTGCCGCTTTTTGTGAAAAAGTGGCGCGAGATTCCGGGACAATAAAAATAACTTGCCGAGGGGATTCGTTGACATACGGCGAAGATAATGTCGTTAGTCAACGTGAAGCCGACCCCGCAGCCACGCCGGAAGGAAGAACACACACATCACTTCGCGCCAATGAAACATACCCAGAAGCATTACAGCGGTTTTTACGACAAGTGTTTTCGGCGACGGTCAATGTCGTTAATCAGGGTTATTCCGGCGACAATACAGACGATTCTTTTTTGGACTGGACAACCAACGAAAACGCAGACGTTTGTTTTATTATGTTGGGTACTAATGACGCGGCGGAAGGTTTTAGCCCTTACCAATCATTAGAACAATACGCAGAAAAATACCGACGCATAATTTTGCGTGAATTTTCGCGTGAAACGGCAGTGGTTTTAATTACATCGCCCGAACAAAAACAAGTAAACGGAAACACGCGTTTACTGGAAGCCTACCGACAAAAAGTATTCGCGCTAGGGAATGAATTCGGTGTGCCAGTCATTGACGGGTGGGAAATATTCAGAAACAGCGATTCTGTTGTGTGGGCAGATAATGTTCACTTTAAAACAGCCGGATACCAGTTGCTTGCCGCGAAAGTAGCCGCGTTCGTAATGGGGCGCGGTAATAATTATCAGACCGTTTATAGCGGGTCGAACCTAACTACACGATTGGGCGAAAACTCAATAAAAGCAAAACTATCTAATTGGGGCATCCAAACGGCAAAAGGTGGTCAAAATACACCGCCGCTTTCATCTTTTAGTGGTGGATATGTTACGGAAACGTCGAATTATGGCGAGTATATTGTATTTTATTTTTACGCTGCAATTGATGATTTGATCGTGACGCCTAATGTAAACGTTGAAAACGCTAGATTAAATATAGCTTTAGATTTTGGGGCAGACGCACAACCGCAATACACCTTTGACGATAAAGTATGGGAAGATACAGACCCTGATAGAACAGCAAAACCAGCTCACACCACAACAATTAACGCTTTCGATTCTGAGGTATTTATTGATAATCTAACCGAATACGCGACAATTAAAGATGTTCGTATACATATCGCGTCTAAAGGTTGGCATTCTATCAGATTCGATATTTCCAATAACGGGAGCACAACAGGTACACCACGTTTAACCGTCGGCGGTTTATCTTTCCTTGATTACTCGACACAAAGATTGGTAGACCGTAAAAACCTGAATATTTCCGGTAATCAAACCCCTGTTGGAAATGTCACACCCGAATATTTGGGGCAAGAGTATTTAGACACATCGCCGGGTGTTGGTGAATGGTTCAAAGCGGTAGGTCTTACATCTGCTAACTGGAAAAAAATAAACTACAAAGTCGAGGATTATAACCAAAGCGACACACAATCCCCAATCGGCAATGTTACGCCGCGATTTTTGGGTGACGAATATTTAGATACATCTAGTGGTCAGTATCATTGGTATAAAGCAACGGGGCTAACATCAAATGACTGGAAACAAACAACTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
49c16dd1caa572f14f141577e707e0d9e448bbaa778d308560401e32f62612d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7202
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50