Protein

View in Explore
Genbank accession
XWX32321.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPHLKAYDKEGNVLAIGYNVELHEEIGSVIIPNLAPHTYYPRGEFFVSWEAERYETDKVEVPGFTTHESSFKEITFYFKDHILVKTKTAYDIAVENGFQGTEQEWVESIKGEKGEKGETGVAGKDGKSFGFEDLSEEQLNMLKGEKGEKGEDGKSSYELAVDEGFQGDLNEYLDSLHGEKGEPLRFSDLTEEQIQSLKGQDGTMTFEDLTEEQKQSLKGDKGDTGEKGEDGESAYDLAVENGFQGSITEFLESLKGEKGEQGIQGEPGKDFKYEDFTETQLNSLKGEKGDQGEKGDPGEKGDTGQAFYTDISLLGANGDGTEDNTELLQSFTDDKTYYVPSGTYKTTVIPAGSFFGEGEILYQDEIIPLSSNVPQKARVNMGKTSGERYQNFVAGQNAGTKLGENTYGITGIGYSVFKNNETGKRLTAFGKGAMSNFVGGYSSVAIGADALGQGTYTNRNVAIGDNALKWGGVTDAIATLHDYWLTTGDDNFINANFLSKYPEVWSLLGSETTPSTDLYPTNDEEYVENTALGRNALLHQMKGSQNTAVGYNSQAHTMRGSQNTSIGNRSLRDNLAGERNSAFGNEALANNLTGRDNVAFGANTLQSILHAVNNTAIGFGAMQNFSDSLNQNTTETKTKGQRNTAIGTQAMYDGKNASYSTFIGSYAGQVVEGDWNVGIGAGSSQSLTTGKSNVGVGSYSNRAVVTGSSNVSIGYSAGPGGDYSNTVSLGHNVHAKGSNQIQIGDTTHTVYTASAIQTNSDRNLKENINNTKLGLEFIKSLRPVDYNYNDSDIQRHGFIAQEVAENEDFGGVSINAKGTEEETYTMAYTELIAPMVKAIQDQQAIIEDLRKEVEELKQNK
Physico‐chemical
properties
protein length:860 AA
molecular weight: 93242,51990 Da
isoelectric point:4,62871
aromaticity:0,08953
hydropathy:-0,66802

Domains

Domains [InterPro]
DC_0876
STR
6–133
DC_0876 DC_1779 IPR030392 Coil
DC_0768
STR
107–502
DC_0768 IPR011049 IPR011049
IPR050149
Unmapped
110–305
IPR050149 DC_1422
IPR030392
CHP
760–853
IPR030392
XWX32321.1
1 860
Architecture
STR
STR 6-860
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX32321.1
1 860
Domain Start End Length (AA) Confidence
N-terminal 1 324 324 0,9930
Central domain 325 716 393 0,9729
C-terminal 717 860 143 0,9047
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-324
Central
325-716
C-terminal
717-860

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_2
[NCBI] 		2815606 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX32321.1 [NCBI]
Genbank nucleotide accession
MZ417328.1 [NCBI]
CDS location
range 34257 -> 36839
strand -
CDS
ATGCCACATTTAAAAGCTTATGATAAAGAAGGAAATGTATTAGCAATAGGTTACAATGTAGAATTACATGAAGAGATAGGTTCAGTTATTATACCTAATTTAGCACCTCACACTTATTACCCTAGGGGTGAATTTTTTGTTTCATGGGAAGCAGAAAGATATGAGACTGATAAAGTAGAGGTACCGGGTTTTACAACTCATGAATCTTCTTTTAAGGAGATAACATTCTATTTCAAAGACCATATATTAGTTAAAACAAAAACTGCTTATGATATAGCAGTAGAGAATGGTTTCCAAGGAACAGAACAAGAATGGGTTGAATCTATAAAAGGAGAAAAGGGAGAAAAAGGGGAGACAGGTGTAGCCGGTAAAGATGGTAAGTCGTTTGGTTTTGAGGATTTAAGTGAAGAGCAACTTAACATGTTAAAAGGTGAGAAAGGAGAAAAAGGGGAAGATGGTAAAAGTAGTTATGAGTTAGCAGTAGATGAAGGTTTCCAAGGAGATTTAAATGAGTATTTAGATAGCTTACACGGAGAAAAAGGAGAACCTCTAAGATTCTCAGATTTAACCGAAGAACAAATACAATCATTAAAGGGTCAAGATGGTACAATGACTTTCGAAGACTTAACTGAAGAGCAAAAACAATCTCTTAAAGGTGATAAAGGGGACACAGGAGAAAAAGGAGAAGACGGGGAAAGTGCTTATGACCTAGCAGTAGAGAATGGGTTCCAAGGGTCAATAACAGAATTCTTAGAATCTCTTAAAGGAGAAAAAGGTGAGCAAGGTATCCAAGGTGAACCCGGTAAAGATTTTAAATATGAGGATTTCACAGAAACACAACTCAATTCCTTAAAAGGAGAAAAAGGAGACCAAGGTGAAAAAGGTGACCCAGGAGAAAAAGGAGATACCGGACAAGCTTTCTATACAGATATTAGTTTATTAGGAGCAAATGGAGACGGCACAGAAGATAATACAGAACTATTACAATCATTTACTGATGATAAAACTTATTATGTGCCATCAGGGACTTATAAAACTACAGTTATTCCTGCAGGCTCATTCTTTGGTGAAGGTGAAATACTTTATCAAGATGAGATAATTCCATTGTCAAGTAATGTACCTCAAAAGGCACGAGTTAATATGGGTAAAACATCAGGTGAGAGATATCAAAACTTTGTAGCCGGACAAAACGCAGGAACTAAACTAGGTGAAAATACGTATGGTATCACAGGTATTGGTTATAGCGTCTTTAAAAACAATGAAACAGGTAAAAGATTAACTGCATTTGGTAAAGGTGCAATGTCTAATTTTGTTGGTGGTTATTCAAGTGTAGCAATTGGTGCAGATGCGCTTGGTCAAGGAACGTATACAAATAGAAACGTTGCGATAGGAGACAATGCTTTAAAATGGGGTGGAGTAACCGATGCAATTGCGACACTTCATGATTATTGGTTAACTACAGGGGACGATAACTTTATCAACGCCAACTTCTTAAGTAAATATCCGGAGGTTTGGAGTTTATTAGGTAGTGAAACAACACCTTCTACAGACCTTTACCCAACAAACGATGAAGAATATGTAGAGAACACTGCACTAGGACGTAACGCTTTATTACACCAAATGAAAGGTTCTCAAAATACCGCAGTAGGATATAACTCACAAGCACACACAATGAGAGGTTCTCAAAATACCTCTATCGGTAATAGAAGTTTACGAGACAATTTAGCAGGTGAAAGAAATAGTGCATTCGGTAATGAAGCATTAGCTAACAACCTAACTGGACGAGACAACGTAGCTTTTGGTGCTAATACATTGCAAAGCATTTTACATGCAGTTAATAATACTGCTATCGGTTTTGGGGCAATGCAAAACTTCTCTGATAGTTTAAATCAGAACACTACTGAAACTAAAACTAAAGGACAAAGAAATACTGCAATCGGTACACAAGCTATGTATGATGGTAAGAACGCTTCTTACTCAACATTCATTGGTAGTTATGCGGGACAAGTTGTAGAAGGAGATTGGAACGTTGGTATTGGTGCAGGGTCTAGTCAATCATTAACAACAGGTAAATCAAATGTTGGCGTTGGTTCTTATTCTAATAGAGCAGTAGTAACAGGTAGTAGTAATGTATCTATAGGATACTCTGCCGGCCCGGGTGGAGACTATTCTAACACAGTTTCATTAGGTCATAATGTACATGCTAAGGGAAGCAACCAAATACAAATCGGTGATACTACTCATACAGTATATACAGCTTCTGCTATTCAAACAAACTCAGATAGAAACTTAAAAGAGAATATTAATAACACTAAACTAGGTCTTGAGTTTATTAAGAGTCTTAGACCTGTAGACTATAATTATAATGATTCAGATATCCAACGTCATGGTTTTATTGCTCAAGAAGTAGCAGAAAATGAGGACTTCGGTGGTGTTTCTATAAATGCTAAAGGAACAGAAGAAGAAACTTATACAATGGCTTATACAGAACTAATAGCACCAATGGTTAAAGCTATCCAAGACCAACAGGCTATTATAGAAGACCTTAGAAAAGAAGTAGAAGAGCTAAAACAAAATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6cac2843adc81beb06c39f6777f98585a3bb10c4b3cafe587d82efd632bf2717
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank