Protein

View in Explore
Genbank accession
XWX32321.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,54
Seq2Symm
C3 confidence 0,975
C3 0,975
C1 0,332
C2 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MPHLKAYDKEGNVLAIGYNVELHEEIGSVIIPNLAPHTYYPRGEFFVSWEAERYETDKVEVPGFTTHESSFKEITFYFKDHILVKTKTAYDIAVENGFQGTEQEWVESIKGEKGEKGETGVAGKDGKSFGFEDLSEEQLNMLKGEKGEKGEDGKSSYELAVDEGFQGDLNEYLDSLHGEKGEPLRFSDLTEEQIQSLKGQDGTMTFEDLTEEQKQSLKGDKGDTGEKGEDGESAYDLAVENGFQGSITEFLESLKGEKGEQGIQGEPGKDFKYEDFTETQLNSLKGEKGDQGEKGDPGEKGDTGQAFYTDISLLGANGDGTEDNTELLQSFTDDKTYYVPSGTYKTTVIPAGSFFGEGEILYQDEIIPLSSNVPQKARVNMGKTSGERYQNFVAGQNAGTKLGENTYGITGIGYSVFKNNETGKRLTAFGKGAMSNFVGGYSSVAIGADALGQGTYTNRNVAIGDNALKWGGVTDAIATLHDYWLTTGDDNFINANFLSKYPEVWSLLGSETTPSTDLYPTNDEEYVENTALGRNALLHQMKGSQNTAVGYNSQAHTMRGSQNTSIGNRSLRDNLAGERNSAFGNEALANNLTGRDNVAFGANTLQSILHAVNNTAIGFGAMQNFSDSLNQNTTETKTKGQRNTAIGTQAMYDGKNASYSTFIGSYAGQVVEGDWNVGIGAGSSQSLTTGKSNVGVGSYSNRAVVTGSSNVSIGYSAGPGGDYSNTVSLGHNVHAKGSNQIQIGDTTHTVYTASAIQTNSDRNLKENINNTKLGLEFIKSLRPVDYNYNDSDIQRHGFIAQEVAENEDFGGVSINAKGTEEETYTMAYTELIAPMVKAIQDQQAIIEDLRKEVEELKQNK
Physico‐chemical
properties
protein length:860 AA
molecular weight: 93242,51990 Da
isoelectric point:4,62871
aromaticity:0,08953
hydropathy:-0,66802

Domains

View on InterPro
Domain architecture
XWX32321.1
1 860 aa
STR 524–765 · CHP 766–853 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XWX32321.1
1 860 aa
Domain Start End Length (AA) Confidence
N-terminal 1 324 324 0,9930
Central domain 325 716 393 0,9729
C-terminal 717 860 143 0,9047
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Staphylococcus phage PG-2021_2 [NCBI] · taxon 2815606
Uroviricota Caudoviricetes Herelleviridae Staphylococcus phage PG-2021_2
Host
Mammaliicoccus vitulinus [NCBI] · taxon 71237
Bacillota Bacilli Caryophanales Staphylococcaceae Mammaliicoccus Mammaliicoccus vitulinus

Coding sequence (CDS)

Genbank protein accession
XWX32321.1 [NCBI]
Genbank nucleotide accession
MZ417328.1 [NCBI]
CDS location
range 34257 -> 36839
strand -
CDS
ATGCCACATTTAAAAGCTTATGATAAAGAAGGAAATGTATTAGCAATAGGTTACAATGTAGAATTACATGAAGAGATAGGTTCAGTTATTATACCTAATTTAGCACCTCACACTTATTACCCTAGGGGTGAATTTTTTGTTTCATGGGAAGCAGAAAGATATGAGACTGATAAAGTAGAGGTACCGGGTTTTACAACTCATGAATCTTCTTTTAAGGAGATAACATTCTATTTCAAAGACCATATATTAGTTAAAACAAAAACTGCTTATGATATAGCAGTAGAGAATGGTTTCCAAGGAACAGAACAAGAATGGGTTGAATCTATAAAAGGAGAAAAGGGAGAAAAAGGGGAGACAGGTGTAGCCGGTAAAGATGGTAAGTCGTTTGGTTTTGAGGATTTAAGTGAAGAGCAACTTAACATGTTAAAAGGTGAGAAAGGAGAAAAAGGGGAAGATGGTAAAAGTAGTTATGAGTTAGCAGTAGATGAAGGTTTCCAAGGAGATTTAAATGAGTATTTAGATAGCTTACACGGAGAAAAAGGAGAACCTCTAAGATTCTCAGATTTAACCGAAGAACAAATACAATCATTAAAGGGTCAAGATGGTACAATGACTTTCGAAGACTTAACTGAAGAGCAAAAACAATCTCTTAAAGGTGATAAAGGGGACACAGGAGAAAAAGGAGAAGACGGGGAAAGTGCTTATGACCTAGCAGTAGAGAATGGGTTCCAAGGGTCAATAACAGAATTCTTAGAATCTCTTAAAGGAGAAAAAGGTGAGCAAGGTATCCAAGGTGAACCCGGTAAAGATTTTAAATATGAGGATTTCACAGAAACACAACTCAATTCCTTAAAAGGAGAAAAAGGAGACCAAGGTGAAAAAGGTGACCCAGGAGAAAAAGGAGATACCGGACAAGCTTTCTATACAGATATTAGTTTATTAGGAGCAAATGGAGACGGCACAGAAGATAATACAGAACTATTACAATCATTTACTGATGATAAAACTTATTATGTGCCATCAGGGACTTATAAAACTACAGTTATTCCTGCAGGCTCATTCTTTGGTGAAGGTGAAATACTTTATCAAGATGAGATAATTCCATTGTCAAGTAATGTACCTCAAAAGGCACGAGTTAATATGGGTAAAACATCAGGTGAGAGATATCAAAACTTTGTAGCCGGACAAAACGCAGGAACTAAACTAGGTGAAAATACGTATGGTATCACAGGTATTGGTTATAGCGTCTTTAAAAACAATGAAACAGGTAAAAGATTAACTGCATTTGGTAAAGGTGCAATGTCTAATTTTGTTGGTGGTTATTCAAGTGTAGCAATTGGTGCAGATGCGCTTGGTCAAGGAACGTATACAAATAGAAACGTTGCGATAGGAGACAATGCTTTAAAATGGGGTGGAGTAACCGATGCAATTGCGACACTTCATGATTATTGGTTAACTACAGGGGACGATAACTTTATCAACGCCAACTTCTTAAGTAAATATCCGGAGGTTTGGAGTTTATTAGGTAGTGAAACAACACCTTCTACAGACCTTTACCCAACAAACGATGAAGAATATGTAGAGAACACTGCACTAGGACGTAACGCTTTATTACACCAAATGAAAGGTTCTCAAAATACCGCAGTAGGATATAACTCACAAGCACACACAATGAGAGGTTCTCAAAATACCTCTATCGGTAATAGAAGTTTACGAGACAATTTAGCAGGTGAAAGAAATAGTGCATTCGGTAATGAAGCATTAGCTAACAACCTAACTGGACGAGACAACGTAGCTTTTGGTGCTAATACATTGCAAAGCATTTTACATGCAGTTAATAATACTGCTATCGGTTTTGGGGCAATGCAAAACTTCTCTGATAGTTTAAATCAGAACACTACTGAAACTAAAACTAAAGGACAAAGAAATACTGCAATCGGTACACAAGCTATGTATGATGGTAAGAACGCTTCTTACTCAACATTCATTGGTAGTTATGCGGGACAAGTTGTAGAAGGAGATTGGAACGTTGGTATTGGTGCAGGGTCTAGTCAATCATTAACAACAGGTAAATCAAATGTTGGCGTTGGTTCTTATTCTAATAGAGCAGTAGTAACAGGTAGTAGTAATGTATCTATAGGATACTCTGCCGGCCCGGGTGGAGACTATTCTAACACAGTTTCATTAGGTCATAATGTACATGCTAAGGGAAGCAACCAAATACAAATCGGTGATACTACTCATACAGTATATACAGCTTCTGCTATTCAAACAAACTCAGATAGAAACTTAAAAGAGAATATTAATAACACTAAACTAGGTCTTGAGTTTATTAAGAGTCTTAGACCTGTAGACTATAATTATAATGATTCAGATATCCAACGTCATGGTTTTATTGCTCAAGAAGTAGCAGAAAATGAGGACTTCGGTGGTGTTTCTATAAATGCTAAAGGAACAGAAGAAGAAACTTATACAATGGCTTATACAGAACTAATAGCACCAATGGTTAAAGCTATCCAAGACCAACAGGCTATTATAGAAGACCTTAGAAAAGAAGTAGAAGAGCTAAAACAAAATAAATAA

Genome Context

Tertiary structure

XWX32321.1
ColabFold structure
Source ColabFold
pLDDT 76.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank