Protein

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Genbank accession
AGK86482.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSGCGDVLSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGINDANKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSILIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGAHGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPISQYPVHMLPLNHLIDNLFVRGSLGVGFGMDGQGLYVSNITVEDCAGSGAYILAHETVFTNIAIIDTNTKNFPANQIYISGACRVNGLRLVGIRSTTEQGMTVDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNDSAALRFRIHKLSKTLDSGSVYSHINGGPGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVATTVLPDNAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72924,69790 Da
isoelectric point:5,15668
aromaticity:0,08918
hydropathy:-0,16213

Domains

Domains [InterPro]
G3DSA:2.10.10.80
65–135
G3DSA:2.10.10.80 IPR011050
IPR040775
71–132
IPR040775 IPR012332
IPR015331
138–684
IPR015331
AGK86482.1
1 684
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage L13
[NCBI] 		1325963 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Gallinarum
[NCBI] 		594 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGK86482.1 [NCBI]
Genbank nucleotide accession
KC832325 [NCBI]
CDS location
range 2006 -> 4060
strand -
CDS
ATGTCCAGTGGTTGCGGTGATGTACTGTCACTTAACGATTTACAAATAGCCAAGAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGCGGTGTAGCAGGCGGCGCAGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTGCCCGCGGTCTTGCGTGACGCCGGTTTCTCTCCGGCGTCTTTTAACTTCACAACCGGCGGAACCCTGGGAATTAACGACGCCAATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGATGGTAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCCGCGGCATCGACACCTCTTACGACAGGCGGCATTTCTGATTCGGCTTGGGTAGCTTTTGGGGACATCACCTTCCGTGCGGAAGCGGATAAGAAATTTAAGTACTCCGTTAAGCTGTCTGACTTTACTACGTTACAACAACTGGCGGATGCTGCCGTCGACAGTATTCTTATCGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAATTTTGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCGTGGACCGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTCCCTGGCATAGAATCCCTTCTCCCTCCGGAAGCTAAAGGGCAAAGCATATCTTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGTGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGTGCACACGGCGTAATCACCTTCGAAAACTTAAGCGGAGATTGGGGCAAAGGTAACTATGTTATCGGCGGGCGCACAAGTTACGGTTCGGTAAGTAGCGCGCAATTCTTACGCAACAATGGCGGTTTCGCGCGCGATGGCGGGGTCATCGGGTTTACCTCGTATCGTGCAGGGGAAAGTGGTGTTAAGACGTGGCAAGGTACGGTAGGTTCTACGACATCTCGTAACTACAACCTGCAATTCCGGGATTCGGCGGTACTGTACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCCGAAGATGACCGCCCAGGGGATTTCCCCATTTCTCAGTACCCGGTACATATGCTCCCTTTAAACCATTTGATAGACAATCTATTTGTTAGAGGTTCGCTGGGGGTAGGATTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACATAACCGTCGAGGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCACTAATATCGCAATAATCGACACCAATACTAAAAACTTCCCTGCGAACCAGATATATATCTCGGGGGCCTGTCGTGTAAACGGCCTTCGTTTGGTCGGCATCCGTTCAACTACCGAACAGGGCATGACGGTAGACGCACCTAACTCCACTGTAAGCGGAATAACGGGCTTCGTGGACCCCTCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTTGGTAACTCTCGCATAAACAGTTTCAATAATGATTCTGCGGCGCTTCGGTTTCGTATTCATAAACTGTCAAAAACCCTTGATAGTGGGTCCGTGTACTCCCACATTAACGGCGGGCCAGGTTCTGGCTCAGCATGGACCGAAATTACCGCTATTGCGGGGAGCTTGCCTGATGCCGTATCATTAAAAATAAATAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGACGACCGTCCTACCAGACAACGCTGTCAGGGATAACGGGTCTATATCACTGTATCTGGAGGGCGATAGCCTTAAAGCGTTAGTTAAGCGGGCCGACGGAAGCTATACAAGATTAACTTTGGCATAA

Tertiary structure

PDB ID
07c569d5e8cc592574166ff0d5e4d1c842375365692b9c6244c41a695bf0afdf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6898
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50