Phage RBP Database

Genbank accession

ATE85630.1 [GenBank]

Protein name

tailspike protein

RBP type

TSP

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,53

Seq2Symm

C1 confidence 0,190

C1	0,190
C2	0,171
I	0,114

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MVDVIKRRTTGVDDANDDGQVEIVMENISPASFSTGLNDTTAVTAPAALTLTVAATGGLAPYSYQWFKNGNAISGATAATYTKTPTVAGTDSGTYKVVVQDGYGNIISDSTVVTVS

Physico‐chemical properties

protein length:	116 AA
molecular weight:	11899,00080 Da
isoelectric point:	4,22992
aromaticity:	0,06897
hydropathy:	0,02586

Domain architecture

ATE85630.1

1 116 aa

STR 30–115 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR007110
STR

IPR007110

IPR013783
STR

IPR013783

IPR036179
RBD

IPR036179

PF13895
Unmapped

PF13895

ATE85630.1

1116 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0400
STR

DC_0400

ATE85630.1

1116 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR007110	STR	DC_0008	30	114	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR013783	STR	IPR013783	35	115	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036179	RBD	IPR036179	41	115	Merged direct domain	Immunoglobulin-like domain superfamily	C-terminal	Low	Positional only	1 proteins / 1 hits
PF13895	Unmapped	-	58	115	Pfam	Immunoglobulin domain	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

ATE85630.1

1 116 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	101	101	0,7978
Central domain	102	105	5	0,0117
C-terminal	106	116	10	0,9843

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Salmonella phage St162 [NCBI] · taxon 2024312

Uroviricota Caudoviricetes Sarkviridae Cornellvirus Cornellvirus St162

Host

Salmonella enterica sv. [NCBI] · taxon 2846078

Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Alphachrysovirus Alphachrysovirus saladoense

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)