Protein

View in Explore
Genbank accession
YP_009873975.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,44
Seq2Symm
C3 confidence 0,841
C3 0,841
C1 0,242
C2 0,020
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MPISNNQKAEKAYKKTVFGVSMTADDKSYYTEPQSPNSVRSKYIWLDDGLVPNTAPASPVIDKIYDKNGVDVVTSGLQGVIQYKEVVMTQVVGSPNAFSIPDNFAIPFNEFDGKYAPVFVNNTTSVVIPFGLNSMEFDASAGVLYFVDGKPTNITSVKIKYWKYVGRTLNSVATNLGVLSVTEFPLHASAPNCSVTGNVLTLTHNLKTTTTYWKILKGKQVIFPSTVEETDLNTFKITFDPMVTAGDNVKIQISKLA
Physico‐chemical
properties
protein length:257 AA
molecular weight: 28144,77290 Da
isoelectric point:7,70449
aromaticity:0,10506
hydropathy:-0,08366

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009873975.1
1 257 aa
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,7460
Central domain 242 246 6 0,0202
C-terminal 247 257 10 0,9821
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Tenacibaculum phage PTm1 [NCBI] · taxon 2547425
Uroviricota Caudoviricetes Shirahamavirus Shirahamavirus PTm1
Host
Tenacibaculum maritimum [NCBI] · taxon 107401
Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Tenacibaculum Tenacibaculum maritimum

Coding sequence (CDS)

Genbank protein accession
YP_009873975.1 [NCBI]
Genbank nucleotide accession
NC_049340 [NCBI]
CDS location
range 206165 -> 206938
strand +
CDS
ATGCCAATATCGAATAATCAAAAAGCAGAAAAAGCATATAAAAAGACTGTTTTTGGTGTATCCATGACAGCCGATGATAAATCATACTACACCGAACCTCAGAGTCCAAATTCAGTTAGGTCAAAATATATTTGGTTGGATGATGGATTAGTACCAAATACTGCACCAGCATCACCAGTAATTGATAAAATATATGATAAGAATGGTGTTGATGTTGTAACAAGTGGATTACAAGGTGTTATACAATATAAAGAGGTTGTTATGACCCAAGTTGTTGGGTCACCTAACGCTTTTAGCATACCTGATAACTTTGCAATACCATTTAATGAATTTGATGGTAAATATGCACCTGTATTTGTGAATAATACAACTAGTGTAGTAATACCATTTGGTTTAAATTCTATGGAATTTGATGCATCAGCAGGTGTTTTATATTTTGTTGATGGTAAACCAACAAACATAACTAGTGTTAAAATAAAGTACTGGAAGTATGTTGGTAGAACTCTAAATAGTGTTGCAACAAATTTAGGTGTATTATCTGTTACCGAATTTCCACTACATGCTAGTGCGCCAAATTGTAGTGTAACTGGTAATGTATTAACATTAACACACAACCTAAAAACAACAACAACATATTGGAAAATATTAAAGGGTAAGCAAGTTATATTTCCTAGTACTGTTGAAGAAACTGATTTAAATACATTCAAGATAACATTTGATCCAATGGTTACTGCTGGTGATAATGTTAAGATACAAATAAGTAAATTAGCATAA

Genome Context

Tertiary structure

YP_009873975.1
ESMFold structure
Source ESMFold
pLDDT 53.2
Oligomeric state monomer
Download structure