Protein

View in Explore
Genbank accession
YP_009873975.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MPISNNQKAEKAYKKTVFGVSMTADDKSYYTEPQSPNSVRSKYIWLDDGLVPNTAPASPVIDKIYDKNGVDVVTSGLQGVIQYKEVVMTQVVGSPNAFSIPDNFAIPFNEFDGKYAPVFVNNTTSVVIPFGLNSMEFDASAGVLYFVDGKPTNITSVKIKYWKYVGRTLNSVATNLGVLSVTEFPLHASAPNCSVTGNVLTLTHNLKTTTTYWKILKGKQVIFPSTVEETDLNTFKITFDPMVTAGDNVKIQISKLA
Physico‐chemical
properties
protein length:257 AA
molecular weight: 28144,77290 Da
isoelectric point:7,70449
aromaticity:0,10506
hydropathy:-0,08366

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009873975.1
1 257
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,7460
Central domain 242 246 6 0,0202
C-terminal 247 257 10 0,9821
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-246
C-terminal
247-257

Taxonomy

  Name Taxonomy ID Lineage
Phage Tenacibaculum phage PTm1
[NCBI] 		2547425 Uroviricota > Caudoviricetes > Shirahamavirus >
Host Tenacibaculum maritimum
[NCBI] 		107401 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009873975.1 [NCBI]
Genbank nucleotide accession
NC_049340 [NCBI]
CDS location
range 206165 -> 206938
strand +
CDS
ATGCCAATATCGAATAATCAAAAAGCAGAAAAAGCATATAAAAAGACTGTTTTTGGTGTATCCATGACAGCCGATGATAAATCATACTACACCGAACCTCAGAGTCCAAATTCAGTTAGGTCAAAATATATTTGGTTGGATGATGGATTAGTACCAAATACTGCACCAGCATCACCAGTAATTGATAAAATATATGATAAGAATGGTGTTGATGTTGTAACAAGTGGATTACAAGGTGTTATACAATATAAAGAGGTTGTTATGACCCAAGTTGTTGGGTCACCTAACGCTTTTAGCATACCTGATAACTTTGCAATACCATTTAATGAATTTGATGGTAAATATGCACCTGTATTTGTGAATAATACAACTAGTGTAGTAATACCATTTGGTTTAAATTCTATGGAATTTGATGCATCAGCAGGTGTTTTATATTTTGTTGATGGTAAACCAACAAACATAACTAGTGTTAAAATAAAGTACTGGAAGTATGTTGGTAGAACTCTAAATAGTGTTGCAACAAATTTAGGTGTATTATCTGTTACCGAATTTCCACTACATGCTAGTGCGCCAAATTGTAGTGTAACTGGTAATGTATTAACATTAACACACAACCTAAAAACAACAACAACATATTGGAAAATATTAAAGGGTAAGCAAGTTATATTTCCTAGTACTGTTGAAGAAACTGATTTAAATACATTCAAGATAACATTTGATCCAATGGTTACTGCTGGTGATAATGTTAAGATACAAATAAGTAAATTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
880694db6436158a70b03c20ea88e7edf408044cd1d3cde10039c77349cd20dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5318
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50