Protein

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Genbank accession
QIG68318.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MAALSRVIKTGDGSTTQFVVDFALGYLSPSDITCRVGNEADGSGNPIYRTITFLSETLLQVGGTPAGNGVQVVFERTVEKEDTIVHFSTGDVLDENNLDLSFKQILMVVHEVLDGRFGAFDSDLDMGGFRITNLGDPVDNSDAATKFYVDDRTALGAEQVALATAAAEVASDAAIAAQAAQTAAAGSASAAATSATNAATSASNAATSASSAAASALSAQTLLSGGSAGQFLGKNSNTNFDYAWINLPGGGDMFKSVYDPQGKNADAFSWNNFTDKPTTFPTTVANISDLKSMAKRDLTISSAAPSGGVDGDVWYKI
Physico‐chemical
properties
protein length:317 AA
molecular weight: 32663,55690 Da
isoelectric point:4,30484
aromaticity:0,07886
hydropathy:-0,03691

Domains

Domains [InterPro]
IPR005604
5–115
IPR005604
QIG68318.1
1 317
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y1_20
[NCBI] 		2509571 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG68318.1 [NCBI]
Genbank nucleotide accession
MN988488.1 [NCBI]
CDS location
range 37513 -> 38466
strand +
CDS
ATGGCAGCACTTTCTCGGGTTATTAAGACCGGCGATGGCAGCACGACACAGTTCGTTGTTGACTTTGCGCTCGGCTATCTAAGCCCCTCGGACATCACTTGTCGCGTAGGCAACGAGGCTGACGGGTCTGGAAACCCAATTTACCGCACTATCACATTCCTGTCGGAAACACTGCTGCAAGTCGGTGGTACTCCTGCTGGTAATGGAGTGCAGGTAGTCTTTGAACGTACCGTCGAGAAAGAGGACACGATTGTTCACTTCTCTACTGGCGACGTTCTGGACGAGAATAACCTTGATCTGTCGTTCAAACAGATTTTGATGGTCGTGCATGAGGTTCTGGATGGGCGCTTTGGTGCGTTCGACAGTGACCTGGACATGGGTGGCTTCCGTATCACCAACTTGGGCGATCCGGTAGACAACAGTGATGCTGCGACCAAGTTCTATGTAGACGACCGTACTGCACTCGGCGCTGAACAGGTGGCTCTTGCTACTGCTGCGGCTGAGGTTGCCAGTGATGCGGCTATTGCTGCACAGGCTGCACAAACGGCTGCGGCGGGTTCCGCCTCGGCGGCTGCGACCAGTGCAACGAATGCAGCTACCAGCGCGAGCAATGCGGCGACATCTGCTTCTAGCGCAGCGGCCAGCGCCCTATCGGCGCAGACCTTGCTGTCCGGTGGCTCCGCTGGTCAGTTCCTCGGCAAGAACTCGAATACGAACTTCGACTACGCCTGGATTAACCTTCCGGGTGGTGGCGATATGTTCAAGTCGGTGTACGACCCGCAGGGCAAGAATGCTGATGCGTTCTCGTGGAACAACTTCACAGACAAGCCTACGACGTTCCCTACGACAGTAGCGAACATCTCAGACCTCAAGTCTATGGCAAAGCGCGACCTCACGATTTCCAGTGCAGCCCCTTCGGGCGGCGTTGACGGAGACGTTTGGTACAAGATTTAA

Tertiary structure

PDB ID
00f66ec5eff1de1100540fe2b3780cad22d36dd35e17ee2447f417f4fae78938
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7980
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank