Phage RBP Database

Genbank accession

YP_010742498.1 [GenBank]

Protein name

tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,87

TF

Evidence RBPdetect2

Probability 0,92

Seq2Symm

C3 confidence 1,000

C3	1,000
C1	0,001
D3	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAAGTLSVTNNSKAVVGVGTTFTAFKAGDFLTLVVGQVPYTVAIASIESATALTLVLPFDGPTATGLAWDGVKRDTMSLATMGVTVQAQKALRLMIADENNWRAIFGEEEEISVTLPNGQVVQGMSWGYLSKLLKDVDPVELQAIADQTITAKNQAQGFRNEAEGFKNTANTAKTAAEAAQGKAETAKTAAESAKTAAETAKSQAVTAKSQAVTAKDQAKGFRDEAEGFANSADASQKVPYAGVTVNAPTGVRDMLKRLRDAVKGGFWRVDDISQFQAGEMTPFRYGPGVCGGAGDTFFAINVDWQTSRVKVFSGNNAAINGSSGRVSAIELAKLGSNGDVAIGDGGTGASNDQGARANLQAMHERRATLVSEDLNDLQGDKAGFYYTGLSANATPERNYPFQEAGCLLVQRTGANDPKSCVQTYTLYRNGRRWIRWLDNAATGIWSQWYELYNAGSSPTFSGVITGSAVRASVDGKIITIKPGAKDVFVHNSASNKYFQLRDNGELAYDNNLIAYNGLAASGTFAMTVPSIKVITANGGFRIDGTASTNDQPLHVTGYNSAGTRLWFLGKDTGTNALFLNDITSCKVELIKDGVVLGTKNFAGKAYVQAASLEINRPSGKYFKMQNDGNSSHPATFKLWGNGAGRPSVIEFGLDDGPGWLFYAQYNSNGTRQMSVNGTVNCTTVNQSSDRELKDNIKPIENARAGLAKMGGYTYTLKKDGMPYAGVIAQEVMDVVPEAVSTFEDHEYLAGPTQDGEELVGRQRFFQVDYGAIAAYAVQVCKEQEEELVSLRSELEELKAAVAALSKA

Physico‐chemical properties

protein length:	808 AA
molecular weight:	86127,26690 Da
isoelectric point:	5,54853
aromaticity:	0,08540
hydropathy:	-0,26510

Domain architecture

YP_010742498.1

1 808 aa

STR 366–453 · CHP 689–795 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

cd19958
STR

cd19958 IPR030392

IPR030392
CHP

IPR030392 Coil

YP_010742498.1

1808 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0162
STR

DC_0162 DC_0613

YP_010742498.1

1808 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
cd19958	STR	DC_0464	366	453	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR030392	CHP	DC_0088	689	795	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	689	740	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	781	808	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Escherichia phage PC2 [NCBI] · taxon 2936919

Uroviricota Caudoviricetes Dhillonvirus Dhillonvirus PC2

Host

Escherichia sp. [NCBI] · taxon 1884818

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia sp.

Genbank protein accession

YP_010742498.1 [NCBI]

Genbank nucleotide accession

NC_073088.1 [NCBI]

CDS location

range 8458 -> 10884
strand -

CDS

ATGGCAGCGGGTACTCTATCCGTAACGAATAACAGCAAGGCGGTTGTAGGGGTAGGCACAACGTTTACCGCGTTTAAAGCTGGTGACTTCTTAACGCTGGTGGTAGGACAAGTCCCCTACACCGTAGCGATCGCGTCCATTGAAAGCGCAACCGCGCTCACGCTGGTGTTGCCGTTCGACGGCCCAACGGCAACCGGCCTTGCGTGGGATGGCGTTAAGCGCGATACCATGTCGCTGGCGACGATGGGCGTAACCGTCCAGGCGCAAAAAGCGCTGCGATTGATGATCGCAGATGAGAACAACTGGCGCGCAATCTTCGGAGAAGAAGAGGAAATCTCGGTCACGCTGCCGAACGGTCAAGTAGTGCAGGGCATGTCGTGGGGCTACCTGTCTAAACTGCTTAAAGATGTAGACCCGGTTGAATTGCAGGCTATCGCAGACCAGACCATCACGGCTAAAAACCAGGCGCAAGGCTTCCGTAACGAGGCGGAAGGATTCAAGAACACCGCGAATACAGCTAAAACAGCGGCGGAGGCCGCACAGGGCAAAGCCGAGACAGCTAAGACGGCAGCCGAGTCCGCAAAGACTGCCGCGGAGACAGCTAAGTCGCAGGCCGTAACTGCTAAGTCGCAGGCCGTAACTGCTAAAGATCAGGCAAAAGGATTCCGCGACGAGGCAGAAGGCTTTGCGAACAGCGCGGACGCCTCGCAGAAAGTGCCGTATGCGGGCGTCACCGTAAACGCTCCGACTGGCGTGAGGGATATGCTAAAGCGGTTGCGCGATGCGGTCAAAGGCGGTTTTTGGCGCGTTGATGATATTTCGCAGTTCCAAGCCGGTGAGATGACCCCTTTCAGATACGGACCCGGTGTATGTGGCGGCGCGGGGGATACATTCTTTGCAATCAACGTTGACTGGCAAACCTCGCGCGTTAAAGTTTTCTCGGGAAACAATGCCGCGATTAACGGATCGTCTGGAAGGGTTAGCGCTATTGAGCTTGCGAAGCTGGGGTCAAATGGGGACGTGGCGATCGGAGACGGTGGGACAGGTGCGTCAAACGACCAGGGCGCGCGCGCCAATCTTCAGGCAATGCACGAGCGCCGGGCAACGTTGGTAAGCGAAGACCTTAACGACCTTCAGGGTGATAAGGCCGGATTTTATTATACTGGCCTGAGTGCCAACGCAACGCCGGAGCGTAATTATCCCTTTCAGGAAGCAGGTTGCCTACTTGTTCAGCGCACTGGCGCTAACGACCCGAAGAGTTGCGTACAGACGTACACATTATACCGCAACGGGCGGCGCTGGATTCGATGGCTAGACAACGCGGCTACTGGAATATGGTCGCAGTGGTACGAGTTGTATAACGCAGGGTCGTCGCCGACTTTTTCTGGAGTAATTACTGGATCTGCGGTGCGCGCTTCCGTTGACGGAAAGATCATAACTATTAAACCTGGCGCCAAAGATGTATTTGTTCACAACTCGGCATCTAATAAATACTTTCAACTTCGTGACAACGGCGAACTGGCGTATGACAACAATCTGATCGCGTATAACGGGCTTGCAGCCAGCGGCACATTTGCTATGACCGTACCCAGCATTAAAGTTATAACCGCTAATGGCGGATTTCGTATCGACGGAACAGCGTCAACAAACGACCAACCACTGCACGTAACAGGGTACAACTCCGCAGGCACACGTCTTTGGTTTTTAGGGAAAGACACTGGGACGAACGCCTTATTCCTGAACGATATTACATCGTGTAAGGTTGAGCTGATCAAGGACGGCGTTGTGCTTGGTACAAAGAATTTTGCGGGTAAAGCATACGTTCAGGCCGCAAGTTTAGAGATCAACCGTCCGAGTGGCAAGTATTTCAAAATGCAGAACGACGGCAACTCGTCACACCCAGCAACCTTCAAATTGTGGGGTAACGGGGCAGGTCGCCCGTCGGTTATTGAGTTTGGGCTTGACGATGGTCCGGGGTGGCTTTTTTACGCCCAGTATAACAGCAACGGCACGCGCCAGATGAGCGTTAACGGGACGGTAAACTGCACGACGGTAAACCAGTCATCGGACCGCGAGTTGAAGGACAACATCAAGCCGATCGAGAACGCTCGCGCGGGCCTTGCTAAGATGGGCGGTTACACCTACACCCTGAAAAAAGACGGTATGCCTTACGCCGGGGTTATTGCGCAGGAAGTAATGGACGTTGTGCCGGAAGCAGTGAGCACGTTTGAGGACCACGAATACCTCGCAGGGCCAACGCAAGACGGAGAGGAGCTGGTGGGTCGTCAGCGCTTCTTTCAGGTCGACTATGGCGCTATTGCCGCTTATGCAGTGCAGGTGTGCAAAGAGCAGGAAGAAGAACTGGTGTCGTTGCGTAGTGAACTGGAGGAATTGAAAGCTGCCGTAGCGGCGCTGTCTAAAGCATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)