Protein

View in Explore
Genbank accession
YP_007006097.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,78
Seq2Symm
C3 confidence 0,994
C3 0,994
C6 0,006
D3 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTNSETGTSSSDGFTIFQGAGSSGEQCGFVNREENGKIRFIMNTGPDMGGNPTIEDQMVLLSNGNLGVGVSDPTRSLHVSGNSYITGRVGIGTTEHSSYYLSIRNTGMATTTGGVLVDCHDWSTNSSEYGINVDIDSSNRTNLTTNRTHRGISTDMRIRVAQNASNTSGTRQSAYGTYSSVHVDDTDNNDGKMYYVWGSYSRGRVDGINCANLRGAYNLAQCADNATGQGRTVDSAYGTYSNMVNDGNQTTITNAYGVYANVNQDDVGGAMTNAYGVYSKLDRDAGTGGTGHLFRGDFDGTWSTKRGLWLTGDTENSVNGTFSAASKDFKIPHPLPELSETKNLVHTCIEAPAHDLIYRGKSELVDGFAIINLDTKFRMTEGTFVALNRKIQCFTSNESDWSAVRGSVSGNILTIECQDSSSTATVSWMVIGERQDDKVKSIVTTDADGNLILEPDREPEEPDTEKAETPD
Physico‐chemical
properties
protein length:471 AA
molecular weight: 50741,70320 Da
isoelectric point:4,76546
aromaticity:0,07431
hydropathy:-0,56072

Domains

View on InterPro

No domain architecture available.

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_007006097.1
1 471 aa
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,0007
Central domain 167 365 200 0,5931
C-terminal 366 471 105 0,8751
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Cyanophage S-TIM5 [NCBI] · taxon 1137745
Uroviricota Caudoviricetes Aurunvirus Aurunvirus STIM5
Host
Synechococcus sp. WH 8102 [NCBI] · taxon 84588
Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Parasynechococcus Parasynechococcus marenigrum

Coding sequence (CDS)

Genbank protein accession
YP_007006097.1 [NCBI]
Genbank nucleotide accession
NC_019516 [NCBI]
CDS location
range 70846 -> 72261
strand +
CDS
ATGACCAACTCTGAGACAGGGACGAGCTCTTCTGATGGTTTTACTATCTTCCAAGGTGCGGGGTCTAGTGGCGAACAATGCGGATTTGTAAATAGAGAGGAAAACGGAAAAATAAGGTTCATTATGAACACCGGCCCAGACATGGGTGGCAACCCAACAATCGAGGATCAGATGGTTCTGCTTAGCAACGGCAACCTTGGAGTTGGCGTCTCTGATCCTACAAGATCACTCCATGTTAGCGGCAATAGTTATATTACAGGTCGTGTAGGAATTGGCACAACAGAGCATTCGAGCTATTATCTATCTATTAGAAATACCGGCATGGCCACCACCACTGGTGGTGTACTTGTTGACTGTCATGACTGGAGCACAAATTCTTCTGAATACGGAATAAATGTTGATATTGATAGCAGCAACCGAACAAACCTAACCACGAACAGAACACACCGAGGCATAAGCACTGACATGAGAATCCGTGTCGCCCAAAACGCCAGCAACACTTCTGGCACTAGGCAGTCTGCGTACGGAACGTATAGCAGTGTGCACGTTGATGACACAGATAATAACGATGGAAAAATGTATTATGTGTGGGGTTCGTACTCTAGAGGCAGAGTTGATGGTATTAATTGCGCCAATCTAAGAGGTGCTTATAACCTTGCTCAGTGCGCCGATAACGCCACTGGCCAAGGGCGAACAGTGGATAGTGCGTACGGCACTTATTCCAACATGGTAAATGATGGTAATCAGACCACCATCACAAACGCCTATGGAGTATATGCCAACGTAAACCAAGACGACGTCGGTGGTGCAATGACAAACGCCTACGGAGTTTACTCTAAGCTAGACAGGGACGCCGGTACCGGAGGAACAGGGCATCTCTTTAGAGGAGACTTTGACGGAACTTGGAGCACTAAGCGTGGCCTTTGGCTTACAGGAGACACGGAAAACTCGGTGAATGGAACATTTTCCGCTGCTTCTAAAGACTTTAAAATCCCGCACCCTCTCCCAGAGCTTTCTGAAACAAAAAATTTAGTCCATACTTGTATTGAGGCTCCTGCTCACGACTTGATTTACAGAGGAAAATCTGAACTTGTAGACGGCTTTGCAATAATTAATTTGGATACAAAGTTTAGAATGACAGAAGGAACTTTTGTTGCTCTGAATAGAAAAATTCAATGCTTTACTTCTAATGAATCGGATTGGAGTGCAGTTAGAGGTTCCGTGAGCGGAAACATTTTAACAATTGAATGCCAAGATAGCTCTTCTACCGCAACGGTTTCTTGGATGGTCATTGGAGAACGCCAAGATGATAAAGTTAAGTCTATTGTTACAACAGACGCGGACGGCAACCTAATCTTAGAACCAGATCGTGAACCAGAAGAACCTGATACTGAAAAAGCAGAGACGCCAGACTAA

Genome Context

Tertiary structure

YP_007006097.1
ESMFold structure
Source ESMFold
pLDDT 63.0
Oligomeric state monomer
Download structure