Protein

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Genbank accession
YP_007006097.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MTNSETGTSSSDGFTIFQGAGSSGEQCGFVNREENGKIRFIMNTGPDMGGNPTIEDQMVLLSNGNLGVGVSDPTRSLHVSGNSYITGRVGIGTTEHSSYYLSIRNTGMATTTGGVLVDCHDWSTNSSEYGINVDIDSSNRTNLTTNRTHRGISTDMRIRVAQNASNTSGTRQSAYGTYSSVHVDDTDNNDGKMYYVWGSYSRGRVDGINCANLRGAYNLAQCADNATGQGRTVDSAYGTYSNMVNDGNQTTITNAYGVYANVNQDDVGGAMTNAYGVYSKLDRDAGTGGTGHLFRGDFDGTWSTKRGLWLTGDTENSVNGTFSAASKDFKIPHPLPELSETKNLVHTCIEAPAHDLIYRGKSELVDGFAIINLDTKFRMTEGTFVALNRKIQCFTSNESDWSAVRGSVSGNILTIECQDSSSTATVSWMVIGERQDDKVKSIVTTDADGNLILEPDREPEEPDTEKAETPD
Physico‐chemical
properties
protein length:471 AA
molecular weight: 50741,70320 Da
isoelectric point:4,76546
aromaticity:0,07431
hydropathy:-0,56072

Domains

Domains [InterPro]
DC_0758
STR
93–471
DC_0758
YP_007006097.1
1 471
Architecture
STR
STR 93-471
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007006097.1
1 471
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,0007
Central domain 167 365 200 0,5931
C-terminal 366 471 105 0,8751
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-166
Central
167-365
C-terminal
366-471

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM5
[NCBI] 		1137745 Uroviricota > Caudoviricetes > Aurunvirus >
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007006097.1 [NCBI]
Genbank nucleotide accession
NC_019516 [NCBI]
CDS location
range 70846 -> 72261
strand +
CDS
ATGACCAACTCTGAGACAGGGACGAGCTCTTCTGATGGTTTTACTATCTTCCAAGGTGCGGGGTCTAGTGGCGAACAATGCGGATTTGTAAATAGAGAGGAAAACGGAAAAATAAGGTTCATTATGAACACCGGCCCAGACATGGGTGGCAACCCAACAATCGAGGATCAGATGGTTCTGCTTAGCAACGGCAACCTTGGAGTTGGCGTCTCTGATCCTACAAGATCACTCCATGTTAGCGGCAATAGTTATATTACAGGTCGTGTAGGAATTGGCACAACAGAGCATTCGAGCTATTATCTATCTATTAGAAATACCGGCATGGCCACCACCACTGGTGGTGTACTTGTTGACTGTCATGACTGGAGCACAAATTCTTCTGAATACGGAATAAATGTTGATATTGATAGCAGCAACCGAACAAACCTAACCACGAACAGAACACACCGAGGCATAAGCACTGACATGAGAATCCGTGTCGCCCAAAACGCCAGCAACACTTCTGGCACTAGGCAGTCTGCGTACGGAACGTATAGCAGTGTGCACGTTGATGACACAGATAATAACGATGGAAAAATGTATTATGTGTGGGGTTCGTACTCTAGAGGCAGAGTTGATGGTATTAATTGCGCCAATCTAAGAGGTGCTTATAACCTTGCTCAGTGCGCCGATAACGCCACTGGCCAAGGGCGAACAGTGGATAGTGCGTACGGCACTTATTCCAACATGGTAAATGATGGTAATCAGACCACCATCACAAACGCCTATGGAGTATATGCCAACGTAAACCAAGACGACGTCGGTGGTGCAATGACAAACGCCTACGGAGTTTACTCTAAGCTAGACAGGGACGCCGGTACCGGAGGAACAGGGCATCTCTTTAGAGGAGACTTTGACGGAACTTGGAGCACTAAGCGTGGCCTTTGGCTTACAGGAGACACGGAAAACTCGGTGAATGGAACATTTTCCGCTGCTTCTAAAGACTTTAAAATCCCGCACCCTCTCCCAGAGCTTTCTGAAACAAAAAATTTAGTCCATACTTGTATTGAGGCTCCTGCTCACGACTTGATTTACAGAGGAAAATCTGAACTTGTAGACGGCTTTGCAATAATTAATTTGGATACAAAGTTTAGAATGACAGAAGGAACTTTTGTTGCTCTGAATAGAAAAATTCAATGCTTTACTTCTAATGAATCGGATTGGAGTGCAGTTAGAGGTTCCGTGAGCGGAAACATTTTAACAATTGAATGCCAAGATAGCTCTTCTACCGCAACGGTTTCTTGGATGGTCATTGGAGAACGCCAAGATGATAAAGTTAAGTCTATTGTTACAACAGACGCGGACGGCAACCTAATCTTAGAACCAGATCGTGAACCAGAAGAACCTGATACTGAAAAAGCAGAGACGCCAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7cd578e44595f43fcb716326753ef0584d4544b13e345313cdec744d29309093
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6299
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50