Protein

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Genbank accession
YP_010767842.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
TSP
Evidence RBPdetect2
Probability 0,60
Seq2Symm
I confidence 0,817
I 0,817
C1 0,263
C2 0,005
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MNLTPNDMLKALASIGLDGIISAGLVSSAGVKPLRRNVAIYGDSRTANCSSGSLPNKITENYGYASWLGQYSDGRIFFEPAFNFGVGGNTSAQWAARVGDVIASPSDVVVCLISTNDRTADFTLAQTQQNIEGVVMKLKQAGKIVVFINETPRGGANALTAPRQAIHEQVRAWINSYLPKLGVRVVDVWDKMTDTASVTVDGLHFNPVGANIVGQALAREIQDLFNSPVPLPRVTSAYDSATNPFGQINTNALLTGTTGTKGGSANTTGDVATGYTVAGSSWTGMTVVASKEAASVGEAQVFKFSGTPTTSGALYTFEQVISLANAKLAANIKAVADIEFEMTGCLGVSLDFRFLDSGTFNSKCCDRYQDGFPMSPIKVSGVQETPTTVITAGCTEVKIRVAVYGSQNVPMSGTVKIKQLAAIAA
Physico‐chemical
properties
protein length:425 AA
molecular weight: 44638,05430 Da
isoelectric point:6,74062
aromaticity:0,07529
hydropathy:0,06024

Domains

View on InterPro
Domain architecture
YP_010767842.1
1 425 aa
STR 31–225 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pseudomonas phage phiPsa300 [NCBI] · taxon 1460362
Uroviricota Caudoviricetes Vandenendeviridae Otagovirus Otagovirus psa300
Host
Pseudomonas syringae pv. actinidiae [NCBI] · taxon 103796
Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae

Coding sequence (CDS)

Genbank protein accession
YP_010767842.1 [NCBI]
Genbank nucleotide accession
NC_073687.1 [NCBI]
CDS location
range 29896 -> 31173
strand +
CDS
ATGAACCTTACTCCAAACGATATGCTGAAAGCTCTAGCCTCTATTGGCCTAGATGGTATTATCTCTGCTGGCCTTGTATCGAGTGCTGGCGTCAAGCCGCTACGTCGTAACGTTGCCATCTATGGTGACAGTCGCACTGCAAACTGCTCTAGCGGCTCCCTCCCAAACAAGATCACAGAAAACTATGGCTATGCCTCTTGGCTCGGCCAATACTCTGATGGTCGTATCTTCTTTGAACCAGCATTCAACTTTGGTGTAGGTGGAAACACTTCTGCTCAGTGGGCTGCTCGCGTTGGTGATGTAATCGCCTCTCCTTCTGATGTTGTTGTTTGTCTTATCTCGACTAACGACCGCACTGCTGACTTCACACTTGCTCAAACTCAACAGAACATTGAAGGTGTTGTGATGAAGTTGAAACAGGCTGGTAAGATTGTTGTGTTCATCAACGAGACTCCACGCGGTGGTGCAAACGCCCTGACAGCTCCAAGACAAGCCATCCATGAACAAGTGAGAGCTTGGATCAACAGCTACCTTCCAAAGCTTGGTGTGCGTGTTGTGGACGTTTGGGACAAGATGACTGATACCGCTTCCGTCACTGTAGACGGTCTACACTTCAACCCAGTTGGTGCAAACATCGTCGGGCAAGCCCTTGCAAGAGAAATCCAAGACCTGTTCAACTCTCCAGTGCCCCTGCCTCGCGTTACAAGCGCGTATGACTCTGCTACCAACCCGTTTGGTCAGATCAACACGAACGCCCTTCTAACAGGCACCACAGGGACTAAGGGAGGCTCTGCCAATACTACAGGTGACGTAGCCACTGGTTACACTGTAGCTGGAAGCTCTTGGACTGGTATGACTGTTGTTGCTTCTAAGGAAGCCGCATCTGTAGGTGAAGCTCAAGTGTTCAAGTTCAGTGGTACACCAACTACATCTGGTGCATTGTACACATTCGAACAAGTGATCAGCCTTGCCAACGCAAAACTTGCAGCAAACATTAAAGCTGTTGCTGATATTGAATTCGAAATGACTGGATGCCTCGGCGTTAGTCTCGACTTCCGCTTCCTTGACTCTGGCACTTTCAACTCTAAGTGCTGCGACCGTTACCAAGATGGATTCCCAATGTCTCCAATCAAAGTGAGCGGTGTTCAAGAAACTCCAACTACAGTAATCACAGCAGGATGTACAGAAGTTAAAATTCGTGTTGCTGTATACGGCAGCCAAAACGTCCCAATGAGTGGGACGGTAAAGATTAAACAACTCGCAGCAATCGCTGCTTAA

Genome Context

Tertiary structure

YP_010767842.1
ESMFold structure
Source ESMFold
pLDDT 82.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank