Protein

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Genbank accession
QEA09949.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPYKSYIYKNDENEQVRRGFIAQDLQKIDPQYVREYGDPGREKTLAIDENVMLLDSVAAIKWLINKVEELQEEINILKAK
Physico‐chemical
properties
protein length:80 AA
molecular weight: 9429,65410 Da
isoelectric point:4,92433
aromaticity:0,08750
hydropathy:-0,66500

Domains

Domains [InterPro]
IPR030392
CHP
1–33
IPR030392 Coil
IPR030392
CHP
1–74
IPR030392
DC_0247
RBD
1–80
DC_0247
QEA09949.1
1 80
Architecture
RBD
RBD 1-80
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage VSe12
[NCBI] 		2847284 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus VSe12
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEA09949.1 [NCBI]
Genbank nucleotide accession
MN022787.1 [NCBI]
CDS location
range 81532 -> 81774
strand -
CDS
ATGCCCTATAAATCATACATCTATAAAAATGATGAGAATGAACAGGTGAGGCGCGGTTTTATAGCTCAGGATTTACAGAAAATAGATCCTCAATATGTACGGGAATATGGAGATCCCGGAAGAGAGAAAACGTTAGCCATTGATGAAAATGTTATGTTGCTTGATTCCGTTGCTGCGATTAAGTGGCTTATTAATAAAGTTGAAGAATTGCAAGAAGAAATAAATATATTGAAAGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c739507267ba297c7124663ed04d1f41df49d641a2cc0d22a29ba6d574e9a49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8827
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella bacteriophage VSe12 Denisenko,E., Volozhantsev,N., Kislichkina,A., Verevkin,V., Myakinina,V. and Krasilnikova,V. 2018-05-24 — GenBank