Protein

View in Explore
Genbank accession
WKV24564.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,001
C4 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MANCNDYISADDLKTGKQAILHIEHVAKSRDATGKPALEATDTIRGESVTNKTLDGFFSSVGFKPADGSFEGGSTINHRWETLLYESEGNYYQWMGMLPKIVPPGSTPATTGGIDATHWVNQTDLMLRSDLNKSNGLSYIGTVSSVSELSSISGSIGDSIILDSYVSGFNFGGGIMVAVSATTTVDNIVTFPGNGVVWKRKFFNGTVDVYDAGYTGTEDLAVFINKINAAGFDCVVPVSGEITTPIIFDIAKGALIGKNKCTLTETASVTGDYYLTIINTGADYINRDAVNATALMSGVSFVGKGSRKLAIGGSTSGVVSELRISNSGFISTAGIEFLDNAYRILFDKCALSRSFTNSAIFNSPANSGEVIKFNHCWMVDNGGPFTFVNGQFIFDSCSLPAGKKSGYFDPTVALSDNATVVFTNGNIEYQPGQSFVGFTVDGSSRLTVSNSTILLPDGYTSVPIVSNGDGVVSLNNCSLPLYGNTTIATGFPTRQLIGGASKKVMSRGCYPRAGFITSNWNLGSIVSPYINSISNGSGQFLNISNWTLSQTGTGVVTATTTNDVPNDLMFSTSFVLSVPSSDAAANFTQTIIDCEPGRYFQLGFWAKNTTTTLASLRFLDQQGNAVADSMGYNISAGGTFNFYALVDCVPPGAYKAEINFNVSSVVGGVVIHNAIYGLI
Physico‐chemical
properties
protein length:679 AA
molecular weight: 71827,66100 Da
isoelectric point:4,93450
aromaticity:0,10309
hydropathy:0,07216

Domains

View on InterPro
Domain architecture
WKV24564.1
1 679 aa
ATT 63–133 · STR 530–672 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WKV24564.1
1 679 aa
Domain Start End Length (AA) Confidence
N-terminal 1 220 220 0,9965
Central domain 221 528 309 0,9937
C-terminal 529 679 150 0,9929
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage vB_EcoS_PJ16 [NCBI] · taxon 3061300
Uroviricota Caudoviricetes Nonanavirus Escherichia phage vB_EcoS_PJ16
Host No host information

Coding sequence (CDS)

Genbank protein accession
WKV24564.1 [NCBI]
Genbank nucleotide accession
OQ955832.1 [NCBI]
CDS location
range 33998 -> 36037
strand -
CDS
ATGGCTAACTGTAACGATTATATCAGTGCTGATGATTTGAAAACAGGCAAACAAGCGATTTTACATATTGAACACGTTGCAAAAAGTCGTGACGCTACCGGTAAACCTGCACTGGAAGCAACCGATACAATCCGTGGCGAATCAGTTACTAACAAAACACTGGATGGTTTTTTTAGTTCAGTTGGTTTTAAACCTGCAGACGGTTCGTTTGAAGGCGGTAGTACTATTAACCATCGTTGGGAAACACTACTATATGAATCAGAAGGTAATTATTACCAGTGGATGGGTATGTTGCCTAAAATTGTTCCACCTGGTTCAACACCTGCAACTACGGGTGGTATTGATGCTACACACTGGGTTAATCAGACGGATTTAATGTTACGTTCTGATTTAAACAAATCAAATGGTTTGTCTTATATAGGGACTGTATCATCAGTTTCTGAGTTATCATCGATATCAGGATCAATTGGTGATTCCATAATTCTTGATTCGTATGTGAGCGGGTTTAATTTTGGTGGTGGTATTATGGTAGCTGTTAGCGCGACTACTACTGTAGACAATATTGTTACCTTCCCCGGAAACGGTGTGGTATGGAAAAGAAAATTCTTCAACGGCACCGTGGACGTGTATGATGCTGGTTATACTGGAACCGAAGATTTGGCGGTATTCATCAACAAAATAAACGCTGCCGGATTTGACTGTGTGGTTCCTGTTTCTGGTGAGATAACAACACCGATTATTTTCGACATAGCAAAAGGCGCACTTATTGGAAAAAATAAATGTACTTTAACAGAAACTGCATCTGTAACCGGTGACTACTACCTAACCATTATTAATACAGGCGCGGATTACATTAACAGAGATGCAGTTAACGCAACTGCTTTGATGAGTGGTGTGTCATTCGTCGGAAAAGGTTCCAGGAAATTGGCTATCGGTGGCTCTACCAGTGGTGTAGTATCAGAGTTAAGAATATCTAATAGTGGGTTTATCTCAACTGCCGGAATTGAGTTTCTTGATAATGCATATCGTATTCTTTTTGATAAATGCGCGTTGTCCAGAAGTTTTACAAATTCTGCTATTTTCAATTCACCAGCGAATTCCGGTGAGGTTATAAAATTTAATCACTGCTGGATGGTTGACAACGGTGGACCTTTCACGTTTGTTAATGGTCAATTTATATTCGATAGCTGCTCTCTACCGGCAGGTAAAAAATCAGGATATTTTGACCCTACTGTTGCGTTATCAGATAACGCAACAGTGGTTTTCACAAACGGTAACATTGAGTACCAACCTGGTCAGAGTTTCGTTGGGTTTACTGTGGATGGCAGTTCACGATTAACCGTCAGTAATTCGACGATACTACTCCCAGACGGGTATACCAGTGTACCTATTGTTAGCAACGGCGATGGGGTTGTTAGCCTAAATAATTGCTCGTTACCCCTCTATGGGAATACAACGATTGCTACCGGATTTCCCACAAGACAGTTGATAGGTGGCGCGAGCAAAAAAGTAATGTCCAGAGGGTGCTATCCACGGGCAGGATTTATCACAAGTAACTGGAATTTAGGGAGCATTGTAAGCCCTTATATTAATAGCATCAGTAATGGCTCAGGACAGTTTTTAAACATATCTAACTGGACACTCTCGCAAACTGGAACAGGAGTTGTCACTGCTACTACAACAAACGATGTTCCTAATGATTTAATGTTTTCAACTTCTTTTGTTTTATCTGTACCATCATCTGACGCAGCAGCTAATTTCACCCAAACAATCATTGATTGTGAGCCAGGTCGTTATTTTCAGCTTGGTTTTTGGGCTAAAAATACAACAACCACCCTGGCGTCACTTAGGTTCCTTGACCAACAAGGAAATGCTGTCGCGGACTCCATGGGATATAACATCTCAGCAGGAGGCACGTTCAATTTTTATGCTTTGGTAGATTGTGTTCCACCAGGAGCTTACAAAGCTGAAATTAATTTCAATGTTTCCTCTGTTGTTGGGGGTGTCGTAATACACAATGCCATTTATGGATTGATTTAA

Genome Context

Tertiary structure

WKV24564.1
ESMFold structure
Source ESMFold
pLDDT 80.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Escherichia phage vB_EcoS_PJ16 against multidrug resistant avian pathogenic E. coli Jhandai,P., Mittal,D. and Gupta,R. 2024 37632591 GenBank