Protein

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Genbank accession
WKV24564.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANCNDYISADDLKTGKQAILHIEHVAKSRDATGKPALEATDTIRGESVTNKTLDGFFSSVGFKPADGSFEGGSTINHRWETLLYESEGNYYQWMGMLPKIVPPGSTPATTGGIDATHWVNQTDLMLRSDLNKSNGLSYIGTVSSVSELSSISGSIGDSIILDSYVSGFNFGGGIMVAVSATTTVDNIVTFPGNGVVWKRKFFNGTVDVYDAGYTGTEDLAVFINKINAAGFDCVVPVSGEITTPIIFDIAKGALIGKNKCTLTETASVTGDYYLTIINTGADYINRDAVNATALMSGVSFVGKGSRKLAIGGSTSGVVSELRISNSGFISTAGIEFLDNAYRILFDKCALSRSFTNSAIFNSPANSGEVIKFNHCWMVDNGGPFTFVNGQFIFDSCSLPAGKKSGYFDPTVALSDNATVVFTNGNIEYQPGQSFVGFTVDGSSRLTVSNSTILLPDGYTSVPIVSNGDGVVSLNNCSLPLYGNTTIATGFPTRQLIGGASKKVMSRGCYPRAGFITSNWNLGSIVSPYINSISNGSGQFLNISNWTLSQTGTGVVTATTTNDVPNDLMFSTSFVLSVPSSDAAANFTQTIIDCEPGRYFQLGFWAKNTTTTLASLRFLDQQGNAVADSMGYNISAGGTFNFYALVDCVPPGAYKAEINFNVSSVVGGVVIHNAIYGLI
Physico‐chemical
properties
protein length:679 AA
molecular weight: 71827,66100 Da
isoelectric point:4,93450
aromaticity:0,10309
hydropathy:0,07216

Domains

Domains [InterPro]
DC_0018
ATT
1–225
DC_0018 G3DSA:2.60.120.260
G3DSA:2.10.10.80
ATT
63–133
G3DSA:2.10.10.80 DC_0715
IPR040775
RBD
68–121
IPR040775
WKV24564.1
1 679
Architecture
ATT
STR
ATT 1-225 | STR 226-672 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKV24564.1
1 679
Domain Start End Length (AA) Confidence
N-terminal 1 220 220 0,9965
Central domain 221 528 309 0,9937
C-terminal 529 679 150 0,9929
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-220
Central
221-528
C-terminal
529-679

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_PJ16
[NCBI] 		3061300 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV24564.1 [NCBI]
Genbank nucleotide accession
OQ955832.1 [NCBI]
CDS location
range 33998 -> 36037
strand -
CDS
ATGGCTAACTGTAACGATTATATCAGTGCTGATGATTTGAAAACAGGCAAACAAGCGATTTTACATATTGAACACGTTGCAAAAAGTCGTGACGCTACCGGTAAACCTGCACTGGAAGCAACCGATACAATCCGTGGCGAATCAGTTACTAACAAAACACTGGATGGTTTTTTTAGTTCAGTTGGTTTTAAACCTGCAGACGGTTCGTTTGAAGGCGGTAGTACTATTAACCATCGTTGGGAAACACTACTATATGAATCAGAAGGTAATTATTACCAGTGGATGGGTATGTTGCCTAAAATTGTTCCACCTGGTTCAACACCTGCAACTACGGGTGGTATTGATGCTACACACTGGGTTAATCAGACGGATTTAATGTTACGTTCTGATTTAAACAAATCAAATGGTTTGTCTTATATAGGGACTGTATCATCAGTTTCTGAGTTATCATCGATATCAGGATCAATTGGTGATTCCATAATTCTTGATTCGTATGTGAGCGGGTTTAATTTTGGTGGTGGTATTATGGTAGCTGTTAGCGCGACTACTACTGTAGACAATATTGTTACCTTCCCCGGAAACGGTGTGGTATGGAAAAGAAAATTCTTCAACGGCACCGTGGACGTGTATGATGCTGGTTATACTGGAACCGAAGATTTGGCGGTATTCATCAACAAAATAAACGCTGCCGGATTTGACTGTGTGGTTCCTGTTTCTGGTGAGATAACAACACCGATTATTTTCGACATAGCAAAAGGCGCACTTATTGGAAAAAATAAATGTACTTTAACAGAAACTGCATCTGTAACCGGTGACTACTACCTAACCATTATTAATACAGGCGCGGATTACATTAACAGAGATGCAGTTAACGCAACTGCTTTGATGAGTGGTGTGTCATTCGTCGGAAAAGGTTCCAGGAAATTGGCTATCGGTGGCTCTACCAGTGGTGTAGTATCAGAGTTAAGAATATCTAATAGTGGGTTTATCTCAACTGCCGGAATTGAGTTTCTTGATAATGCATATCGTATTCTTTTTGATAAATGCGCGTTGTCCAGAAGTTTTACAAATTCTGCTATTTTCAATTCACCAGCGAATTCCGGTGAGGTTATAAAATTTAATCACTGCTGGATGGTTGACAACGGTGGACCTTTCACGTTTGTTAATGGTCAATTTATATTCGATAGCTGCTCTCTACCGGCAGGTAAAAAATCAGGATATTTTGACCCTACTGTTGCGTTATCAGATAACGCAACAGTGGTTTTCACAAACGGTAACATTGAGTACCAACCTGGTCAGAGTTTCGTTGGGTTTACTGTGGATGGCAGTTCACGATTAACCGTCAGTAATTCGACGATACTACTCCCAGACGGGTATACCAGTGTACCTATTGTTAGCAACGGCGATGGGGTTGTTAGCCTAAATAATTGCTCGTTACCCCTCTATGGGAATACAACGATTGCTACCGGATTTCCCACAAGACAGTTGATAGGTGGCGCGAGCAAAAAAGTAATGTCCAGAGGGTGCTATCCACGGGCAGGATTTATCACAAGTAACTGGAATTTAGGGAGCATTGTAAGCCCTTATATTAATAGCATCAGTAATGGCTCAGGACAGTTTTTAAACATATCTAACTGGACACTCTCGCAAACTGGAACAGGAGTTGTCACTGCTACTACAACAAACGATGTTCCTAATGATTTAATGTTTTCAACTTCTTTTGTTTTATCTGTACCATCATCTGACGCAGCAGCTAATTTCACCCAAACAATCATTGATTGTGAGCCAGGTCGTTATTTTCAGCTTGGTTTTTGGGCTAAAAATACAACAACCACCCTGGCGTCACTTAGGTTCCTTGACCAACAAGGAAATGCTGTCGCGGACTCCATGGGATATAACATCTCAGCAGGAGGCACGTTCAATTTTTATGCTTTGGTAGATTGTGTTCCACCAGGAGCTTACAAAGCTGAAATTAATTTCAATGTTTCCTCTGTTGTTGGGGGTGTCGTAATACACAATGCCATTTATGGATTGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
46d0bd50c313f1111abec9be3602dfdd601ae6cece7f9397bf7abfa1fc2b095c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Escherichia phage vB_EcoS_PJ16 against multidrug resistant avian pathogenic E. coli Jhandai,P., Mittal,D. and Gupta,R. 2024 37632591 GenBank