Phage RBP Database

Genbank accession

UVN13468.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,81

Seq2Symm

C2 confidence 0,090

C2	0,090
C1	0,080
C3	0,043

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSTLRTDTLQTTDSSFTIDVEDIASQIYVDDKVSGATRSVSSVAALKTTMPEYDGQILILNGYYEDTPGVGGGLVRWDATSTLTPDDGLVIQRTDVPVGRYIRDVSQGIWAEMFGARNDGTDPEGTTNAVWAAIRAMRRDEVDVIHNNIEGLLIQTSQFTPSTTSQPTEQWLRILGCTGVLDSNTFSGPTSKVVLLANQLNNG

Physico‐chemical properties

protein length:	203 AA
molecular weight:	21992,15400 Da
isoelectric point:	4,32035
aromaticity:	0,06404
hydropathy:	-0,23990

Domain architecture

UVN13468.1

1 203 aa

RBD 39–105 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059934
RBD

IPR059934

UVN13468.1

1203 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2004
STR

DC_2004

UVN13468.1

1203 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059934	RBD	DC_0541	39	105	InterPro cluster	Phage tail protein-like, small four-stranded beta-sheet domain	C-terminal	Low	Positional only	683 proteins / 690 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

UVN13468.1

1 203 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	124	124	0,9911
Central domain	125	192	69	0,9770
C-terminal	193	203	10	0,5997

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pseudomonas phage vB_PaeP_FBPa8 [NCBI] · taxon 2969617

Uroviricota Caudoviricetes Zobellviridae Paundecimvirus Pseudomonas phage vB_PaeP_FBPa8

Host

Pseudomonas sp. [NCBI] · taxon 306

Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp.

Genbank protein accession

UVN13468.1 [NCBI]

Genbank nucleotide accession

ON857932 [NCBI]

CDS location

range 1462 -> 2073
strand -

CDS

ATGAGTACCTTACGTACTGATACACTACAAACCACTGATAGTTCTTTCACCATTGATGTCGAGGACATTGCTAGTCAGATTTATGTGGATGATAAGGTCAGTGGGGCTACTAGGTCGGTCAGTTCTGTAGCTGCACTTAAGACTACTATGCCTGAGTATGACGGTCAGATTCTAATCCTTAATGGGTATTACGAAGACACTCCTGGCGTTGGTGGTGGTCTAGTCCGCTGGGATGCAACCTCTACGCTTACCCCAGATGACGGTCTGGTGATCCAGCGTACAGATGTGCCTGTAGGGAGGTATATCAGGGATGTGTCGCAAGGCATATGGGCTGAAATGTTTGGTGCTCGTAATGATGGCACTGACCCAGAGGGAACTACTAATGCTGTATGGGCGGCCATCCGTGCAATGCGTCGAGACGAAGTTGATGTCATCCATAATAATATTGAAGGTTTATTAATCCAAACCAGCCAGTTTACTCCAAGTACTACTAGCCAACCAACTGAACAATGGCTAAGGATTTTGGGCTGTACTGGCGTACTTGACTCAAATACATTCTCCGGGCCAACCTCTAAAGTTGTACTACTAGCCAACCAACTGAACAATGGCTAA

Title	Authors	Date	PMID	Source
Fagenbank pseudomonas phage collection	van den Berg,D.F., Costa,A.R., Esser,J.Q., Muralidharan,A., Estrada Bonilla,B., Haagsma,A.C., van der Steen,B.A., van den Bossche,H., Nobrega,F.L., Haas,P.-J. and Brouns,S.J.J.	2024-11-19	—	GenBank

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature