Protein

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Genbank accession
CAB4164202.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSGVSITGLNPASTLTGSEIVPIVQSGTTVRTTVANMGPVGSFTQSGTGAVTTTVQAKLRETVSVKDFGAVGDGVTDDTAAIQAAITACGGASGKSVYFPAGDYYISAAISVPNYTRIIGDGAAKSRINLQGKPYGGVVFKNLDTTEWGWFEIQDFCVRGGSYAIYNTASTQEQFNFTNVNFEIQTVAGIYSAYNWQINNLVNVIFYYCVVGIYIPAGFANMNNFINVGFLGLSNWSVNISGSGEVNNFQGCRFEAGGLATHDTIVLVNSRNTVFDGCYFENTHERLLNQVSSDGTIFTNCHFTGWGGSLSAYQFSTNNLITFGTNSWYGQTDGPTNMQIIGNNVGKLGLNNKLVTVANKQNQKLTGVSTAVPLAGITIDTVTLSRNVLANTLVDTSALFGKMRIVYFEVTSGGFFGVKVVTLPITVTTIGAGALTTTFGTQAVEINTTGSIVFTPSLSGSTIKIAVSGVSATMTSAFVTWDWDCVAGANPTYYPIITAFA
Physico‐chemical
properties
protein length:501 AA
molecular weight: 52928,87360 Da
isoelectric point:5,26934
aromaticity:0,10978
hydropathy:0,19820

Domains

Domains [InterPro]
IPR012334
35–481
IPR012334
IPR011050
61–384
IPR011050
IPR024535
63–134
IPR024535
CAB4164202.1
1 501
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4164202.1 [NCBI]
Genbank nucleotide accession
LR796761 [NCBI]
CDS location
range 5888 -> 7393
strand +
CDS
ATGTCTGGTGTAAGTATAACTGGTCTGAACCCCGCCTCAACGCTTACCGGCTCTGAGATTGTACCCATTGTGCAAAGCGGCACAACGGTACGTACAACTGTGGCAAACATGGGGCCTGTAGGGTCGTTTACTCAGTCTGGCACCGGCGCAGTCACGACCACTGTGCAAGCCAAACTGCGTGAGACCGTTAGCGTTAAAGACTTTGGTGCTGTAGGCGATGGAGTGACGGACGATACGGCTGCGATTCAGGCGGCGATTACAGCATGTGGCGGAGCATCAGGAAAATCAGTGTATTTCCCTGCTGGAGATTATTATATTTCTGCGGCAATTAGCGTACCAAATTACACAAGAATTATCGGTGATGGAGCAGCCAAAAGCCGCATAAATTTACAAGGAAAACCTTATGGTGGCGTAGTATTTAAAAACTTGGATACTACCGAATGGGGTTGGTTTGAAATACAAGATTTTTGTGTGCGAGGAGGATCGTACGCAATTTACAACACAGCATCAACGCAAGAACAATTTAATTTTACAAACGTAAATTTTGAAATTCAAACTGTTGCAGGTATTTATTCAGCGTATAATTGGCAGATAAATAATTTAGTCAACGTAATTTTTTATTATTGTGTAGTTGGCATTTATATCCCTGCTGGATTTGCCAACATGAATAATTTTATCAATGTTGGGTTTTTAGGATTATCTAATTGGTCAGTAAATATCTCAGGGTCTGGTGAAGTAAATAATTTCCAAGGTTGTAGATTTGAAGCTGGTGGATTAGCTACACACGATACAATAGTATTAGTTAATTCACGCAATACAGTATTTGATGGATGTTATTTTGAAAATACGCATGAGCGTTTATTGAATCAAGTGTCATCTGATGGAACGATATTTACTAACTGTCATTTCACTGGATGGGGCGGAAGTTTAAGCGCGTATCAATTTTCAACAAATAATTTAATTACTTTTGGTACGAACAGTTGGTATGGACAAACTGATGGCCCAACCAATATGCAAATTATTGGTAATAACGTAGGGAAACTTGGGTTAAATAACAAATTAGTTACGGTCGCTAACAAACAAAATCAAAAGTTGACTGGCGTATCCACAGCAGTTCCTTTAGCAGGGATAACGATAGACACAGTAACTTTGTCACGAAATGTACTAGCAAATACGCTTGTAGATACGTCCGCTTTGTTTGGAAAAATGCGTATCGTTTATTTTGAGGTAACTTCTGGCGGATTTTTTGGTGTAAAAGTTGTTACCTTGCCTATCACTGTAACAACTATCGGTGCAGGTGCATTAACTACTACATTTGGTACACAAGCAGTTGAAATAAACACAACTGGTAGCATTGTATTTACCCCGTCCTTATCTGGGTCAACAATTAAAATTGCTGTATCTGGTGTAAGTGCGACTATGACATCTGCATTTGTCACATGGGATTGGGATTGTGTTGCTGGCGCAAATCCAACATATTATCCAATAATCACTGCTTTCGCATAA

Tertiary structure

PDB ID
2193fb58eb5a760a1e6840397d23904ddba804aa80f7456692e5eb0e5d03e80f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7244
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50