Phage RBP Database

Genbank accession

XRX15014.1 [GenBank]

Protein name

tail fiber

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,36

Seq2Symm

C1 confidence 0,665

C1	0,665
C2	0,128
C3	0,040

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADNPVVINEQPGWVEPLLALMPDDKVEATEEGTGNANKQARVLDARTRYLKEEVNTLTTKVNAVSNDRLPFNRNIVVYGDSRAYQCVKGNVGLAFWTSAKTEGVVAFPDAMNAGVDGNTTSQQAQRLPQLLASLDKFDVIIHLGSGNDRLRNQTFNETINNLSEIYATLLANGKTVIAIAETPVEQAAIGISDEQLAIHYQVHQWMLSELPKRGVIVVNPWDDMVEPGNVNKPLAGMLGDGVHPSPKGAEIIGNHVAAAVSKLFKNTITLPTSYIPFSTTPPETAHFFGSINPNPLLTGNDGVAGDSGGATITTVEIASNTGIGGNQLTGLTIGITKEANPSGGEYQVMSFTGTPTGDQPTLGMEQDLSITNLTVGMKLVAQGRWAIQTDAEAVLQVGLELEVTYQNDQVQTVRSGQNTELNYPLRQGDLSGIFDTQILELASVPKTLKLRVVIVLKKGVAQTTTVRVGQLNTHLVFTP

Physico‐chemical properties

protein length:	480 AA
molecular weight:	51459,53620 Da
isoelectric point:	4,96434
aromaticity:	0,05417
hydropathy:	-0,14813

Domain architecture

XRX15014.1

1 480 aa

STR 54–266 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR051532
Unmapped

IPR051532

IPR036514
STR

IPR036514

SSF52266
STR

SSF52266

SSF52266
STR

SSF52266

cd00229
ENZ

cd00229

IPR013830
ENZ

IPR013830

XRX15014.1

1480 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0391
RBD

DC_0391

XRX15014.1

1480 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR051532	Unmapped	-	49	268	InterPro	Diverse Ester Hydrolysis Enzymes	-	-	-	-
IPR036514	STR	IPR036514	54	264	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
SSF52266	STR	SSF52266	74	266	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
SSF52266	STR	SSF52266	74	260	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
cd00229	ENZ	DC_0001	76	260	InterPro cluster	cd00229	C-terminal	High	Text match	480 proteins / 783 hits
IPR013830	ENZ	DC_0001	79	251	InterPro cluster	SGNH hydrolase-type esterase domain	C-terminal	High	Text match	480 proteins / 783 hits

Proteins with similar domain architecture

Phage

Pseudomonas phage vB_PaeM_GXNNA8 [NCBI] · taxon 3412969

Uroviricota Caudoviricetes Pseudomonas phage vB_PaeM_GXNNA8

Host

Pseudomonas aeruginosa [NCBI] · taxon 287

Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa

Genbank protein accession

XRX15014.1 [NCBI]

Genbank nucleotide accession

PV400810.1 [NCBI]

CDS location

range 96660 -> 98102
strand +

CDS

ATGGCTGACAATCCCGTGGTGATTAATGAACAACCGGGATGGGTTGAACCTTTGTTGGCTCTGATGCCGGATGACAAGGTTGAAGCCACCGAAGAAGGCACCGGCAATGCGAACAAGCAAGCGCGTGTGCTGGACGCTCGTACCCGTTATTTGAAAGAAGAAGTGAATACCCTGACCACCAAAGTCAATGCGGTAAGTAATGACCGGTTGCCGTTTAACCGCAATATCGTGGTGTACGGTGACAGCCGTGCTTACCAGTGCGTGAAAGGTAACGTTGGTCTGGCCTTCTGGACCAGTGCGAAGACCGAGGGGGTCGTAGCCTTCCCGGATGCCATGAACGCCGGTGTCGATGGGAATACTACCTCCCAACAAGCCCAACGTCTTCCCCAACTCCTGGCTTCCTTGGATAAGTTCGATGTGATTATCCATTTGGGTTCGGGGAATGACCGTCTGCGTAACCAGACGTTCAATGAAACGATCAATAACCTCTCCGAGATTTACGCTACATTGCTGGCCAATGGTAAGACCGTCATTGCGATCGCTGAAACCCCGGTAGAACAAGCCGCTATTGGAATCAGTGATGAACAATTGGCTATTCATTACCAAGTGCACCAGTGGATGCTCTCTGAGCTGCCTAAACGGGGCGTTATCGTGGTTAACCCCTGGGATGACATGGTAGAACCGGGTAATGTCAATAAGCCGCTGGCAGGCATGCTGGGGGACGGTGTACACCCAAGTCCCAAAGGAGCCGAGATCATCGGTAACCATGTCGCCGCTGCGGTGAGCAAGCTGTTCAAGAATACCATTACCTTGCCAACCAGTTATATCCCGTTCAGCACGACACCACCAGAGACCGCGCACTTCTTCGGGAGTATTAACCCTAACCCTTTGCTGACCGGTAACGATGGTGTTGCGGGGGATTCGGGAGGTGCTACTATTACCACGGTTGAGATCGCCTCGAATACCGGTATTGGGGGTAATCAACTAACCGGTTTGACCATTGGTATCACCAAGGAAGCCAACCCTTCGGGGGGCGAATACCAGGTGATGTCCTTTACGGGCACGCCTACCGGTGATCAACCAACCCTGGGAATGGAACAGGATCTCTCTATTACAAACCTGACCGTAGGGATGAAACTGGTAGCTCAGGGTCGTTGGGCGATTCAAACCGATGCTGAAGCGGTCTTGCAAGTAGGGTTGGAACTGGAAGTAACCTACCAGAACGATCAAGTCCAAACTGTACGCTCGGGTCAGAACACTGAACTGAATTACCCCCTGCGTCAAGGGGATCTCTCGGGGATCTTCGATACCCAAATCCTTGAATTGGCCAGTGTACCTAAGACCTTGAAACTCCGGGTCGTGATTGTGTTGAAGAAAGGGGTCGCCCAAACGACCACCGTGCGGGTGGGTCAATTGAACACCCATCTTGTCTTTACCCCTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)