Phage RBP Database

Genbank accession

AEJ81510.1 [GenBank]

Protein name

EPS depolymerase

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,97

Seq2Symm

C3 confidence 0,999

C3	0,999
C1	0,002
D3	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADQSTIVEIPLTSATRAVTIPFDYLTRSAVVLTIKQVDDVTFEKTLRLTDDYRFTGLTEVTLNGDYSSFGDLLEVKRHTPATRLVDFRDGSVLTANSLNISQLQAIHIAEEGRFEITTEIREATADAQRFAQAAAASAGESKTYRDSTQKIWDGILDSIQAAGDKGTLGYLATPAGFSAIGGYISFDALRLAKPQFEGQRVKLESYIAGKYLGGGEFVGHLTTAPDNGGTIASGPTHHWKRTDDNGSLNVTHFGAVMDGVTDDMHAVIKMHNWSRSIDATFGPGIVLPSGKIALSPYDFGDAEIPAFKMKGPTVSYGRLPSVMIIPFNKTSMAYMFRFKARRMDVSFIYVNGAGSKCGFLENTVTRGDYCRIHAVQARGMTGRVFHVFDTIDTAVTQCYSSQGKASFFRTDWSNENPGAWDHPTAIKITDCNFEGHTGEYAVSCIRAGQSVMEDVWFDHCDQGFDISQGGWLLKNVTQENSKLPSGAQYAKVIQIKCRFAQGAGLSPGVSGYDPAQDPSGSMPSWVNSVYERGTANWDQLGFINTGSMSYGYESSQYKMSNMTGNAVWYEIGTLGFSGAVGVSCDIELVGTGHFDSAVADARPQGTNFGGGKSVIRVQQKDSNTKMAASWYGEQASPISDVRIVLGNKNRPRIFVQLRGYTGGVATTFHTNDKSNFEGGQHFYLSPVFAAIDIATVPTAVQVPAHWSVNNSAFGLGYNMTDGQLMLEGKTSNQAASEYLPIKMNGLDKVIALQPLVGSVRTPRYTLAELPRATEHPYGVVLVSDAVSGNGTTTWRMAFSTGSFWFTADGANNLGAGSVSSQG

Physico‐chemical properties

protein length:	823 AA
molecular weight:	88982,61660 Da
isoelectric point:	5,93305
aromaticity:	0,10207
hydropathy:	-0,21908

Domain architecture

AEJ81510.1

1 823 aa

ATT 5–127 · STR 247–507 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604 IPR011050

IPR012334
STR

IPR012334

AEJ81510.1

1823 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1510
STR

DC_1510 DC_0716

AEJ81510.1

1823 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	5	127	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
IPR011050	STR	IPR011050	247	492	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	249	507	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AEJ81510.1

1 823 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	264	264	0,9968
Central domain	265	542	279	0,9785
C-terminal	543	823	280	0,9873

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Erwinia phage vB_EamP-L1 [NCBI] · taxon 1051673

Uroviricota Caudoviricetes Autographivirales Autotranscriptaviridae Elunavirus Elunavirus L1

Host

Erwinia amylovora [NCBI] · taxon 552

Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Erwinia Erwinia amylovora

Genbank protein accession

AEJ81510.1 [NCBI]

Genbank nucleotide accession

HQ728265 [NCBI]

CDS location

range 32533 -> 35004
strand +

CDS

ATGGCCGACCAATCTACTATCGTTGAGATTCCCTTAACGTCCGCAACTCGTGCCGTCACGATTCCTTTCGATTACCTTACGCGCTCTGCTGTGGTCCTTACCATTAAGCAGGTAGATGACGTAACGTTTGAGAAGACTCTACGCCTGACGGACGACTACCGCTTTACGGGTCTGACTGAAGTCACGCTCAATGGCGACTACTCCTCTTTTGGTGACCTGCTTGAAGTTAAGCGTCACACCCCGGCTACCCGTTTGGTAGACTTCCGGGACGGTTCGGTACTGACCGCGAACTCTCTGAACATCTCACAGCTTCAGGCGATTCACATTGCCGAGGAAGGCCGCTTCGAGATTACCACTGAGATTCGTGAAGCCACAGCAGACGCACAGCGTTTCGCTCAGGCAGCAGCAGCAAGTGCTGGTGAGTCCAAGACCTACCGTGATTCCACTCAGAAAATCTGGGATGGCATACTTGATTCAATCCAAGCGGCTGGAGACAAGGGTACTTTAGGTTACCTTGCGACCCCTGCTGGTTTCTCCGCTATTGGCGGCTACATCTCGTTTGATGCACTGCGCCTCGCGAAGCCTCAGTTTGAGGGACAACGTGTGAAGCTGGAGTCGTACATTGCTGGTAAGTATCTGGGTGGCGGGGAGTTCGTTGGTCATCTTACTACAGCGCCCGATAATGGAGGCACCATTGCTTCCGGTCCGACCCACCACTGGAAACGTACAGATGACAATGGGTCACTGAATGTGACACACTTCGGTGCTGTTATGGATGGTGTTACAGACGATATGCACGCTGTCATTAAGATGCACAACTGGTCCCGCTCTATCGATGCCACCTTTGGTCCGGGCATTGTGCTGCCTTCTGGTAAGATTGCACTCTCTCCGTATGACTTCGGTGATGCAGAGATTCCAGCGTTCAAGATGAAAGGCCCAACGGTATCTTATGGTCGTCTGCCTAGCGTGATGATTATCCCGTTCAATAAGACCTCAATGGCCTACATGTTCCGCTTCAAGGCACGCCGTATGGACGTATCGTTCATTTACGTGAACGGCGCTGGTTCCAAGTGCGGCTTCTTAGAGAACACCGTGACTCGTGGTGACTACTGCCGAATCCATGCGGTTCAAGCTCGTGGTATGACAGGTCGAGTGTTCCATGTGTTCGACACCATCGACACCGCTGTGACACAGTGCTACTCCTCTCAAGGTAAGGCATCGTTCTTCCGCACCGATTGGTCCAACGAGAATCCGGGAGCATGGGACCATCCGACTGCAATCAAGATTACCGATTGTAACTTCGAGGGTCACACGGGCGAGTACGCAGTTTCCTGTATACGAGCTGGTCAATCCGTTATGGAAGATGTGTGGTTCGACCACTGCGACCAAGGGTTTGATATCTCTCAGGGTGGCTGGTTACTGAAGAACGTCACACAGGAAAACTCAAAGCTACCATCTGGTGCACAATACGCTAAGGTGATTCAGATTAAGTGCCGCTTCGCTCAGGGTGCTGGATTGAGTCCTGGCGTGTCTGGCTATGACCCGGCACAGGACCCATCTGGTTCGATGCCTTCTTGGGTGAACTCAGTGTACGAGCGAGGTACTGCCAATTGGGACCAGTTAGGTTTCATCAATACTGGCAGCATGAGCTACGGCTATGAGTCCTCTCAGTACAAGATGTCCAACATGACTGGTAATGCTGTGTGGTACGAGATTGGAACCTTAGGTTTCTCTGGCGCGGTTGGTGTTAGCTGTGATATTGAACTCGTTGGTACAGGTCACTTCGACTCGGCTGTTGCTGATGCTCGCCCACAGGGCACCAACTTTGGCGGCGGTAAATCAGTCATTCGTGTTCAGCAGAAAGATAGCAACACCAAAATGGCCGCATCATGGTACGGTGAGCAAGCCTCTCCAATCTCTGATGTGCGTATCGTTCTGGGTAATAAGAACCGTCCGCGTATCTTCGTGCAACTGCGAGGTTACACTGGTGGTGTCGCTACGACCTTCCACACGAACGATAAGTCAAACTTCGAGGGTGGTCAGCACTTCTACCTATCCCCGGTGTTCGCTGCGATTGACATTGCGACCGTGCCTACTGCTGTACAGGTTCCTGCGCACTGGAGTGTTAACAACTCCGCGTTTGGTCTCGGTTACAACATGACAGACGGTCAATTGATGTTAGAGGGTAAGACCTCGAATCAGGCTGCGAGTGAGTACCTACCTATCAAGATGAATGGTTTGGACAAGGTAATTGCTCTGCAACCTCTCGTAGGCTCAGTGCGAACCCCGCGTTACACACTTGCAGAACTTCCACGAGCAACAGAGCACCCTTACGGTGTGGTCCTAGTGTCGGATGCTGTTAGCGGAAATGGTACGACCACATGGCGTATGGCGTTCTCTACAGGCTCCTTCTGGTTCACTGCGGACGGTGCGAACAACCTCGGTGCAGGTTCTGTATCTTCACAAGGATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)