Protein

View in Explore
Genbank accession
AIX17471.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MSQLKVNSIKGINVPASGPQIDIGNTGDINLNNSNVTGVTTATATTANITTNNVTTENVTTLNVTNTLDLRNADQLIVPSGTNAERPATPNVGTIRYNTETGKPEFWNGSTWKNFTIQRFSEEISSGSTWSVPAGVTSVDVLVVAGGGDGGSGTGGGGGAGGVVYATGFGVTPGGSVPISIGAGAAGGGQGRGRNGSNSTFGTITANGGGGGGSTYPPQRAAGRPGGSGGGGAQHPAGRSGNGRATQPASPSGGGVGYGNAGAPGGEGGGGGAGGRQLNLHLLQAVALVMAMQVLQVAKAAAVALVVEVQAIRAVLVLPSLLVKLTIQ
Physico‐chemical
properties
protein length:328 AA
molecular weight: 31852,86720 Da
isoelectric point:9,62224
aromaticity:0,03659
hydropathy:-0,06799

Domains

Domains [InterPro]
IPR049304
128–275
IPR049304
AIX17471.1
1 328
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014b
[NCBI] 		1493508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX17471.1 [NCBI]
Genbank nucleotide accession
KJ019041 [NCBI]
CDS location
range 29734 -> 30720
strand +
CDS
ATGTCACAACTTAAAGTTAATTCTATTAAGGGCATCAATGTTCCTGCATCGGGACCGCAAATTGATATTGGTAACACAGGAGATATTAATCTTAATAACTCTAATGTTACTGGTGTTACTACGGCAACCGCAACGACTGCGAACATTACTACCAATAATGTAACTACAGAAAATGTAACAACTTTGAATGTTACTAATACTCTGGACTTGCGTAATGCAGACCAGTTAATTGTTCCTTCAGGAACAAATGCTGAGAGACCTGCAACACCAAATGTTGGTACGATCCGATATAATACTGAAACTGGTAAACCAGAATTCTGGAATGGATCTACATGGAAAAATTTCACTATTCAAAGATTCAGTGAAGAAATTAGCTCAGGTTCTACTTGGAGTGTTCCTGCTGGTGTAACTTCTGTCGATGTTTTAGTAGTTGCTGGCGGCGGTGATGGCGGTTCAGGCACTGGCGGTGGTGGTGGTGCTGGTGGAGTTGTTTATGCTACTGGATTTGGTGTAACTCCTGGTGGGAGTGTTCCAATTTCTATTGGTGCAGGTGCTGCTGGTGGTGGTCAAGGTAGAGGTCGTAACGGTTCTAACAGCACCTTTGGCACCATCACTGCTAACGGTGGTGGTGGCGGTGGGTCTACTTACCCTCCTCAGCGTGCTGCTGGTCGCCCTGGCGGTTCAGGCGGTGGCGGTGCTCAACACCCAGCAGGTAGAAGTGGCAACGGTAGAGCAACTCAACCTGCATCTCCTTCAGGCGGTGGCGTTGGTTATGGCAATGCAGGTGCTCCAGGTGGCGAAGGCGGCGGCGGTGGCGCTGGTGGTAGGCAACTCAACCTGCATCTCCTTCAGGCGGTGGCGTTGGTTATGGCAATGCAGGTGCTCCAGGTGGCGAAGGCGGCGGCGGTGGCGCTGGTGGTAGAGGTTCAGGCAATCAGGGCGGTGTTGGTGTTACCATCACTGTTGGTGAAACTGACTATTCAGTAG

Tertiary structure

PDB ID
bca846030489627d8fe970ec08d99f97f55a8be914edd7bf2855674c9d4f1af2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6387
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank