Protein

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Genbank accession

YP_009214795.1 [GenBank]

Protein name

endolysin

RBP type

TSP

Evidence DepoScope

Probability 1,00

Seq2Symm

C3 confidence 0,339

C3	0,339
D3	0,174
C2	0,093

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSVKIIGDIAAEFNRLGGRSVFTRGWESRGNGQSSNYGGLLLHHTAGSRNVNIDQILISGRWDLAGPLCNFCIMYDGDLGVIAAHPANHAGEPRWMPDGAFSTNWSLQPRDYRLRNPVPWSGADGSGSVRVGQAPCHRDPQCSGQGRTIPVGQVPSGHLRGGQVGPRLR

Physico‐chemical properties

protein length:	169 AA
molecular weight:	18180,19460 Da
isoelectric point:	9,48699
aromaticity:	0,07101
hydropathy:	-0,43669

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_009214795.1

1 169 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	96	96	0,3637
Central domain	97	158	63	0,4339
C-terminal	159	169	10	0,9874

Note: Constraints were applied during segmentation.
Fixed 60 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage

Tsukamurella phage TIN3 [NCBI] · taxon 1636546

Uroviricota Caudoviricetes Tinduovirus Tinduovirus TIN3

Host

Tsukamurella inchonensis [NCBI] · taxon 42777

Actinomycetota Actinomycetes Mycobacteriales Tsukamurellaceae Tsukamurella Tsukamurella inchonensis

Coding sequence (CDS)

Genbank protein accession

YP_009214795.1 [NCBI]

Genbank nucleotide accession

NC_028966 [NCBI]

CDS location

range 32597 -> 33106
strand +

CDS

GTGAGTGTCAAGATCATCGGAGACATCGCCGCCGAGTTCAATCGACTCGGCGGTCGATCCGTCTTCACTCGAGGATGGGAGTCCCGTGGAAACGGACAGTCTTCCAACTACGGTGGACTCTTGCTCCACCACACGGCAGGCTCCCGCAACGTCAACATTGATCAGATTCTCATCTCTGGGAGATGGGACCTTGCAGGACCCTTATGCAATTTCTGCATCATGTACGACGGCGACTTGGGGGTCATTGCTGCACACCCTGCGAACCACGCTGGCGAACCACGCTGGATGCCAGACGGCGCCTTTTCCACGAACTGGTCTCTTCAACCGAGAGATTATCGGCTGCGAAATCCAGTACCCTGGAGTGGAGCCGATGGCTCAGGTTCAGTACGAGTCGGCCAAGCGCCTTGCCACCGCGACCCTCAATGTTCTGGGCAAGGCCGGACAATACCAGTGGGTCAAGTTCCATCAGGGCACCTCCGTGGAGGGCAAGTGGGACCCCGGCTACGCTGA

Genome Context

Tertiary structure

YP_009214795.1

ESMFold structure

Source ESMFold

pLDDT 52.9

Oligomeric state monomer

Download structure