Protein

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Genbank accession
APQ42488.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MGIKPTSGNHVVIPPDNTQSRWGEWEAELDNKGEVAGEVITETWALADSANKVASKALSDAQDAIDSSGEANAELEALLDPNNENSALWAIQWQINENDRIALERHQELIEANMQAISALRENRYISLWLNFDAQSTENEYIRLYRSTDSGGYRRINWSIKPGWVGSFQIVAGTNIDTSAFNNVVYMRELYVPNPQFKSFSDKSVGSVLCTITIKPGTAKKETLPISDQSIERSWQTLQSWTVPQDTEVTASARLTFANKTRIADYGLRILVDGSNNTSSSASSTAPLFGHGPRTHSASMNTRRVKAGSVISVQAKADHSNSLNRQITNASFDVTWIDGTDA
Physico‐chemical
properties
protein length:342 AA
molecular weight: 37670,15970 Da
isoelectric point:5,09251
aromaticity:0,07602
hydropathy:-0,47749

Domains

Domains [InterPro]
Coil
Unmapped
103–123
Coil DC_1463
APQ42488.1
1 342
Architecture
RBD
RBD 210-337 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage PMP-GADVASU-IND
[NCBI] 		1927015 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APQ42488.1 [NCBI]
Genbank nucleotide accession
KY203335.1 [NCBI]
CDS location
range 34337 -> 35365
strand +
CDS
ATGGGGATTAAGCCTACTTCCGGCAATCATGTCGTTATCCCGCCCGATAATACTCAGTCCCGCTGGGGCGAGTGGGAGGCGGAGCTTGACAATAAGGGTGAGGTTGCTGGTGAGGTCATTACGGAAACGTGGGCTTTGGCAGATTCCGCCAATAAGGTGGCTTCTAAAGCTCTTTCTGATGCGCAAGATGCTATCGATTCTTCCGGCGAGGCTAACGCGGAACTCGAAGCACTGCTAGACCCCAATAATGAAAACTCTGCTTTGTGGGCTATACAGTGGCAGATTAATGAGAATGACCGCATCGCGTTGGAGCGACATCAGGAGCTTATCGAAGCGAATATGCAGGCTATTTCTGCACTGCGGGAAAACCGCTATATTTCCCTTTGGCTTAACTTTGATGCGCAGTCTACGGAGAATGAGTATATCCGACTGTATAGATCCACAGACTCTGGCGGATACCGGAGAATCAACTGGAGTATTAAGCCTGGCTGGGTAGGTTCATTTCAGATTGTCGCAGGCACTAATATTGACACTAGTGCTTTCAACAATGTCGTATATATGCGTGAGCTTTACGTTCCGAACCCTCAGTTTAAATCCTTCTCGGATAAATCTGTCGGTTCTGTTTTATGCACGATCACTATTAAGCCGGGCACTGCGAAAAAGGAAACTCTCCCCATTTCTGACCAGAGTATCGAGCGCAGCTGGCAGACATTACAGTCGTGGACGGTGCCGCAGGATACGGAGGTTACCGCTTCGGCGCGTCTAACCTTCGCCAACAAGACGCGAATCGCAGACTACGGATTAAGAATCCTAGTCGATGGATCTAACAACACTTCCTCGTCCGCTTCGTCTACCGCTCCCCTTTTCGGGCACGGACCACGCACCCATTCCGCGTCAATGAACACTCGTCGCGTGAAAGCAGGTTCAGTCATTAGCGTGCAGGCGAAGGCAGACCATAGCAACTCACTAAATAGGCAGATTACTAACGCAAGTTTTGACGTGACGTGGATTGACGGAACGGACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca7cf5206c702c5f4d4ca2e1760741979558549fafde0ca97afd057138d8613d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6008
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of lytic Pasteurella multocida Phage PMP-GADVASU-IND Qureshi,S., Saxena,H.M., Yan,X., Kashoo,Z.A. and Donovan,D.M. 2018-07-17 — GenBank