Protein

View in Explore
Genbank accession
APQ42488.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,41
Seq2Symm
C3 confidence 0,996
C3 0,996
C1 0,132
C2 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MGIKPTSGNHVVIPPDNTQSRWGEWEAELDNKGEVAGEVITETWALADSANKVASKALSDAQDAIDSSGEANAELEALLDPNNENSALWAIQWQINENDRIALERHQELIEANMQAISALRENRYISLWLNFDAQSTENEYIRLYRSTDSGGYRRINWSIKPGWVGSFQIVAGTNIDTSAFNNVVYMRELYVPNPQFKSFSDKSVGSVLCTITIKPGTAKKETLPISDQSIERSWQTLQSWTVPQDTEVTASARLTFANKTRIADYGLRILVDGSNNTSSSASSTAPLFGHGPRTHSASMNTRRVKAGSVISVQAKADHSNSLNRQITNASFDVTWIDGTDA
Physico‐chemical
properties
protein length:342 AA
molecular weight: 37670,15970 Da
isoelectric point:5,09251
aromaticity:0,07602
hydropathy:-0,47749

Domains

View on InterPro
Domain architecture
APQ42488.1
1 342 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pasteurella phage PMP-GADVASU-IND [NCBI] · taxon 1927015
Uroviricota Caudoviricetes Pasteurella phage PMP-GADVASU-IND
Host
Pasteurella multocida [NCBI] · taxon 747
Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida

Coding sequence (CDS)

Genbank protein accession
APQ42488.1 [NCBI]
Genbank nucleotide accession
KY203335.1 [NCBI]
CDS location
range 34337 -> 35365
strand +
CDS
ATGGGGATTAAGCCTACTTCCGGCAATCATGTCGTTATCCCGCCCGATAATACTCAGTCCCGCTGGGGCGAGTGGGAGGCGGAGCTTGACAATAAGGGTGAGGTTGCTGGTGAGGTCATTACGGAAACGTGGGCTTTGGCAGATTCCGCCAATAAGGTGGCTTCTAAAGCTCTTTCTGATGCGCAAGATGCTATCGATTCTTCCGGCGAGGCTAACGCGGAACTCGAAGCACTGCTAGACCCCAATAATGAAAACTCTGCTTTGTGGGCTATACAGTGGCAGATTAATGAGAATGACCGCATCGCGTTGGAGCGACATCAGGAGCTTATCGAAGCGAATATGCAGGCTATTTCTGCACTGCGGGAAAACCGCTATATTTCCCTTTGGCTTAACTTTGATGCGCAGTCTACGGAGAATGAGTATATCCGACTGTATAGATCCACAGACTCTGGCGGATACCGGAGAATCAACTGGAGTATTAAGCCTGGCTGGGTAGGTTCATTTCAGATTGTCGCAGGCACTAATATTGACACTAGTGCTTTCAACAATGTCGTATATATGCGTGAGCTTTACGTTCCGAACCCTCAGTTTAAATCCTTCTCGGATAAATCTGTCGGTTCTGTTTTATGCACGATCACTATTAAGCCGGGCACTGCGAAAAAGGAAACTCTCCCCATTTCTGACCAGAGTATCGAGCGCAGCTGGCAGACATTACAGTCGTGGACGGTGCCGCAGGATACGGAGGTTACCGCTTCGGCGCGTCTAACCTTCGCCAACAAGACGCGAATCGCAGACTACGGATTAAGAATCCTAGTCGATGGATCTAACAACACTTCCTCGTCCGCTTCGTCTACCGCTCCCCTTTTCGGGCACGGACCACGCACCCATTCCGCGTCAATGAACACTCGTCGCGTGAAAGCAGGTTCAGTCATTAGCGTGCAGGCGAAGGCAGACCATAGCAACTCACTAAATAGGCAGATTACTAACGCAAGTTTTGACGTGACGTGGATTGACGGAACGGACGCATAA

Genome Context

Tertiary structure

APQ42488.1
ESMFold structure
Source ESMFold
pLDDT 60.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete Genome Sequence of lytic Pasteurella multocida Phage PMP-GADVASU-IND Qureshi,S., Saxena,H.M., Yan,X., Kashoo,Z.A. and Donovan,D.M. 2018-07-17 — GenBank