Phage RBP Database

Genbank accession

YP_010088172.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Seq2Symm

C2 confidence 0,433 truncated

C2	0,433
C1	0,403
C3	0,291

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKKFIKKIDGGLDLDVQIERLGVNKLSDAINVSSHNFNRKQGELNASLGFSNDGWSLHSKCLGQTIGGIEKWSMANSAELFSKCVFVHSHDAGDQSFIVANGLLGTNTKYTAFYTAERHKADVPEKVPEQLADHNVWNLTEVYVHEGEFIDESFSFATYSFYEEKFMFITKDNFAMRVLVNGANVKTELTSFNYDPLRESSPIIKNVRTGPSMAIPSMTRYVYRILYIDGTHGPFSSVSNIITIPADYPEEWSSDETMKWSDPKYARLIKSNILVTVHVDVHAEENVARIELYAMRYITNEGLSPGPAIVELVGDSANGKIIDFIDGVAHFPTEVTNSDIEVEVLIPPVFESGAVCAIKDEILYVGNTREHLDSDTKNAAFDAWDARVWQLNSDKKAIDSTGTEYTLEQLYELTTSPTWLQIQNCLLGRDSSTSTIPLLDNAGQPGAIGKNIHIGFIKGKLEVGGVYPEAYQSQSPTTTSYGMSYENCNVASYFRGLCAPSHSSGMDTYDGQWYADNTTKAGVSTQKTVDFTDGEDAYVASQDFASDGEPLGHSFANPRFASRYRSMQHDSVYRIGIYFIDERESASQIKWLGDIRTPSLNTYGFRLCDNARPVDNGKAVTWKSNTYTQFTEMVMYPIYMLVKLGSIPAPYTRARIVYAKRELYNRNVILTGVMHALANPIEPQYLQNRHFRDCQRHSLPPLPHINSSQWFFGGREGIVSFDGTNAGSDMRWAMSDSHTPGQNADVSTLNVDENYVYAGVWRTLKPSSKDERVMKMLTAISDNYLNIKNPPAMTESALPCSGATATAVLGVKGVVGDFTSKVTRTEEHSKTSADGTTTSSSGWSETESHTPNEQKHFNMVCSARFRAHPVEINAMTAGTARKRLYNFYAPELDHTDDADNPFISSMAEQNISFASDHSVCTHAFLTSLMASTSLGKEIAAVHSIQNKTADRNTRGESWVHSMGYFRDAQLVTNEYSNTKYDHNTFAGTNYAGMETYWVTSGITRQPRAINFYEDTEGYKDDMVKTFNSSVSLKTAKYFIMWDQLQGGEDVTTLNLTIKAGRYSPSPIKLSEDMFQYLWPCTFSAHVPPAYPGGAFPQKIEAVDVGTNSFVNICPLWSGKFIPTHAFGEAKSLMFAETMMYTEMTDKSRNHMFSLYRTAMATSKFKKSSSTISNLYGCPFGLAWANRDAFITPLSDHGAENFVDVDNIKFGDGADGKANKPFAKSKFVYDSARVHYPYTLQTPSRLYSPLTNRDIIVSYGSGYPTKNDYVFPDVSWVNYISLLNDYIPPFCFGGYTSGSSPVFPNGNFKGMIADMYDDVSKVVRETMGPGTSPDTFENFTMTLDLVSGLNYHGYGGNAITFDFDSNIPAFEDKFRVSHDKSGHHLFKRTHGATSAWGGDYMVHYSTADSQVEPDYLDHAIHRASHVVLSTVRSKVVPFKSDYIEMADWIECAPESEITLNEDGNPIATIITGFDMFVGIHKRMYMNAFYANGVGARSDASLSSSAPIQMMFPTETMINLDIANPCSELRSPANRNNAITPRISHFAGYKFPIAGYTQKKKDFTYNSVFSSEFSSKNQLVVNQMIRREVFFNRLWYATFNHNAGRFNAFKAGDSIDLDRQYGAITGIVPSMDRLVVLQERAMCVLNPSQPTVLADAAQEQRPVYIGSGRLFASGIRYTTTDSGMAKGDRAYPFLEKVYWVDRDNQRIMRFNQEETADISTIHGVRSWVKDILTVQPQAPYRMHELEDGNRRLAFNHSRELWGTFKFRPWVQRNCMEINESRDAFMSFITIGAPIVSNISGKNMYLYNAHFITDDSEPDGRNDREYTNRVFSDGRYDAYYYYEDRDVDPSVGMFINPMGDIKTDKEFNGISVPIVGTGEKRLVFDMEMKLMPEDAGGLLTVRRCMQTFMYPYTTKDNKGEKMTDDAIVSLVENQVPKVISDAIMHPKTGAAIDGFTSKVLKQVKKTDMVNQHGRQLGTAVPFGYYVYVPLNKVDQQSEVYRMMKPFIGNTPVDAFYTVNIPIRGFGFHLNMRMHDFSESSTNMLGQKFDTKVFRVPTNLGVRTRIEAYFNDISVAYAALIEHETETGG

Physico‐chemical properties

protein length:	2085 AA
molecular weight:	233879,95190 Da
isoelectric point:	5,76043
aromaticity:	0,11511
hydropathy:	-0,38897

Domain architecture

YP_010088172.1

1 2085 aa

STR 356–969 · STR 1351–1802 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR057889
STR

IPR057889 IPR057889

YP_010088172.1

12085 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR057889	STR	DC_0599	356	969	InterPro cluster	Crassvirus muzzle protein, N-terminal region	Central	Low	Positional only	32 proteins / 45 hits
IPR057889	STR	DC_0599	1351	1802	InterPro cluster	Crassvirus muzzle protein, N-terminal region	Central	Low	Positional only	32 proteins / 45 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_010088172.1

1 2085 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	1233	1233	0,0015
Central domain	1234	1448	216	0,7288
C-terminal	1449	2085	636	0,6031

Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Azobacteroides phage ProJPt-Bp1 [NCBI] · taxon 1920526

Uroviricota Caudoviricetes Crassvirales Suoliviridae Dechshavirus Dechshavirus japanensis

Host

Candidatus Azobacteroides pseudotrichonymphae [NCBI] · taxon 511435

Bacteroidota Bacteroidia Bacteroidales Azobacteroides (SeqCode) Candidatus Azobacteroides pseudotrichonymphae

Genbank protein accession

YP_010088172.1 [NCBI]

Genbank nucleotide accession

NC_055706 [NCBI]

CDS location

range 86410 -> 92667
strand +

CDS

ATGAAAAAGTTTATAAAGAAGATCGACGGTGGGCTAGACCTTGACGTACAGATTGAGCGTCTAGGGGTAAATAAGCTATCTGATGCGATCAATGTATCTAGTCACAATTTCAACCGTAAGCAAGGAGAGCTTAATGCCTCACTAGGCTTCAGCAATGATGGCTGGTCATTACATAGTAAATGCCTAGGCCAGACCATTGGTGGGATAGAGAAGTGGAGCATGGCTAATTCTGCCGAGCTGTTCTCTAAATGTGTGTTTGTTCACTCGCATGATGCTGGTGATCAATCCTTCATTGTTGCTAATGGCTTGCTTGGCACAAACACTAAGTACACTGCTTTCTACACTGCCGAGAGGCATAAGGCCGATGTACCAGAGAAAGTGCCTGAGCAACTAGCAGACCATAATGTATGGAACCTCACTGAGGTGTATGTGCATGAGGGTGAGTTCATTGATGAATCATTCTCTTTCGCTACCTACTCGTTCTACGAGGAGAAGTTCATGTTCATCACCAAGGATAATTTCGCTATGCGTGTGCTTGTCAATGGTGCTAATGTCAAGACTGAGCTCACATCCTTCAACTACGACCCATTACGTGAGTCATCACCGATAATCAAGAATGTACGTACCGGACCATCTATGGCTATACCATCCATGACCAGGTATGTGTATAGGATACTGTATATCGATGGTACACACGGCCCATTCTCATCTGTATCGAACATTATCACCATACCAGCCGACTATCCTGAGGAGTGGTCAAGTGATGAGACAATGAAATGGTCTGACCCTAAGTACGCTAGGCTAATCAAATCTAATATCCTTGTCACTGTACATGTTGATGTGCATGCTGAGGAGAACGTTGCTCGTATAGAGCTATATGCTATGCGTTATATCACTAATGAAGGTCTCTCACCAGGCCCAGCTATCGTTGAGCTTGTTGGTGACAGCGCTAATGGTAAGATAATAGACTTTATCGATGGTGTAGCACACTTCCCTACTGAGGTGACTAACTCAGATATAGAGGTTGAGGTACTCATCCCACCTGTGTTCGAGTCTGGTGCTGTATGTGCTATCAAGGACGAGATACTCTATGTTGGTAACACACGTGAACACCTTGACTCAGACACTAAGAACGCTGCTTTTGATGCGTGGGACGCACGTGTATGGCAGCTCAATAGTGATAAGAAAGCTATTGACTCAACAGGTACTGAGTACACACTAGAGCAACTATATGAGCTAACCACATCACCTACATGGCTACAGATACAGAACTGTCTACTTGGTAGAGACTCAAGCACCTCAACCATACCACTCCTTGATAATGCAGGCCAGCCAGGTGCAATAGGGAAGAACATCCACATAGGCTTCATCAAAGGCAAGCTAGAGGTTGGTGGTGTATACCCAGAAGCTTATCAGTCTCAATCACCAACAACAACCAGCTATGGCATGAGCTACGAGAACTGTAATGTAGCCTCATACTTCCGTGGTCTATGTGCACCATCACACTCATCTGGTATGGATACATACGATGGTCAATGGTACGCAGACAATACCACCAAGGCTGGTGTATCTACACAGAAAACTGTTGACTTCACTGATGGTGAGGATGCGTATGTAGCATCACAGGACTTCGCTAGTGATGGCGAGCCATTAGGACACTCCTTCGCTAACCCACGCTTCGCCTCTAGGTATAGAAGTATGCAGCACGACAGTGTATACCGTATAGGTATCTACTTCATTGATGAGCGTGAGAGTGCGTCACAGATCAAGTGGCTAGGAGATATACGTACACCATCCCTGAACACTTATGGCTTCCGGCTATGTGATAATGCTCGCCCAGTAGATAATGGCAAAGCTGTGACATGGAAGAGCAACACCTACACCCAGTTCACTGAGATGGTCATGTATCCTATCTATATGCTTGTCAAGCTAGGTAGTATACCTGCACCATACACCAGAGCACGTATTGTCTATGCTAAGCGTGAGCTATACAACCGCAATGTCATCCTCACTGGTGTCATGCATGCATTAGCTAACCCTATTGAACCTCAGTACCTACAGAACAGACACTTCCGTGACTGTCAGCGCCACTCATTACCACCATTACCACATATCAACAGCAGTCAATGGTTCTTTGGTGGACGTGAGGGGATAGTATCTTTTGATGGTACCAATGCTGGTAGTGATATGCGTTGGGCTATGTCCGACTCACACACGCCAGGACAGAACGCTGATGTGTCTACCCTGAACGTGGATGAGAACTACGTCTATGCAGGTGTATGGCGCACACTCAAGCCATCATCTAAGGACGAGCGTGTGATGAAGATGCTAACAGCTATCAGTGATAACTACTTGAATATCAAGAACCCACCTGCTATGACTGAGTCAGCGTTACCATGTAGTGGTGCCACAGCCACAGCAGTGTTAGGTGTCAAGGGTGTAGTAGGAGACTTCACTTCCAAGGTCACACGCACAGAGGAGCATAGCAAGACCAGTGCAGATGGCACAACAACATCATCTAGTGGATGGTCTGAGACTGAGTCACATACACCAAATGAGCAGAAGCACTTTAACATGGTCTGTTCAGCACGTTTCCGTGCACACCCAGTGGAGATCAACGCCATGACAGCAGGTACAGCAAGGAAGAGGTTATACAATTTCTACGCTCCTGAGCTAGACCATACGGATGATGCTGACAACCCCTTCATCAGCTCCATGGCTGAACAGAACATCTCTTTTGCTAGCGACCATTCAGTATGCACACACGCGTTCCTCACATCCCTCATGGCATCTACTAGCCTAGGTAAGGAGATAGCTGCAGTGCATTCCATACAGAACAAGACTGCTGATCGTAACACACGTGGTGAGTCATGGGTACACTCTATGGGGTACTTCCGTGATGCACAGCTAGTGACTAACGAATACAGCAATACCAAGTACGACCACAACACGTTCGCAGGTACTAACTATGCTGGCATGGAGACCTACTGGGTCACATCAGGCATAACCAGACAGCCTAGGGCAATCAACTTCTACGAAGACACTGAGGGGTATAAGGATGACATGGTCAAGACCTTCAACTCCTCTGTCTCACTCAAGACAGCTAAGTACTTCATCATGTGGGACCAGCTACAGGGTGGTGAAGATGTAACAACACTCAACCTAACTATCAAGGCAGGCAGGTACTCACCATCACCTATCAAGCTCAGTGAAGACATGTTCCAGTACCTATGGCCATGCACGTTCTCTGCACATGTCCCTCCAGCATACCCTGGTGGTGCTTTTCCACAGAAGATTGAAGCGGTAGATGTAGGTACGAACTCATTTGTTAATATATGCCCACTATGGTCAGGTAAGTTCATCCCTACCCACGCCTTTGGTGAGGCTAAGAGTCTTATGTTTGCTGAGACTATGATGTACACTGAGATGACAGATAAGAGCAGGAATCATATGTTCTCCTTGTACCGTACAGCCATGGCAACAAGCAAGTTCAAGAAATCATCCTCTACCATCAGTAACCTCTATGGCTGCCCATTTGGTTTAGCCTGGGCTAATAGGGATGCGTTCATCACACCACTATCTGACCATGGAGCAGAGAACTTCGTTGATGTAGACAATATCAAGTTCGGTGATGGTGCAGATGGCAAGGCTAACAAACCATTTGCTAAGAGCAAGTTCGTCTATGACAGCGCACGTGTGCATTATCCATACACACTACAGACACCTAGCAGACTATACTCACCACTAACAAACAGAGACATCATCGTCAGCTATGGTAGTGGCTACCCAACAAAGAACGACTACGTGTTCCCTGATGTGTCATGGGTGAACTATATCAGCCTACTCAATGACTATATCCCACCATTCTGTTTCGGTGGCTACACCTCAGGCTCATCACCAGTGTTCCCTAATGGCAACTTCAAAGGCATGATAGCAGATATGTACGATGATGTCAGCAAGGTCGTTAGAGAAACCATGGGTCCAGGCACATCACCAGACACCTTTGAGAACTTCACCATGACACTAGACCTAGTCAGTGGGCTTAACTACCATGGGTACGGGGGTAATGCGATAACATTTGATTTTGATAGTAACATACCAGCCTTTGAAGATAAGTTCCGTGTCTCGCACGACAAGAGTGGTCATCACCTGTTCAAACGTACTCATGGAGCTACATCAGCATGGGGTGGGGATTACATGGTTCATTACAGTACTGCTGATAGCCAGGTCGAACCAGACTATCTTGATCATGCTATACACCGTGCATCACATGTTGTTCTTTCTACCGTACGTTCTAAGGTCGTGCCATTCAAGAGTGACTATATCGAGATGGCTGACTGGATCGAGTGTGCACCAGAGAGTGAGATAACACTCAATGAGGATGGTAACCCAATAGCTACCATCATAACAGGTTTTGACATGTTCGTAGGGATACATAAACGTATGTATATGAACGCTTTCTATGCTAATGGTGTTGGTGCACGCTCAGATGCATCACTATCATCATCAGCACCTATACAGATGATGTTCCCTACAGAGACGATGATCAACCTTGACATTGCTAACCCATGCTCAGAGCTACGCAGCCCAGCGAACAGGAACAATGCTATCACACCACGTATATCCCACTTTGCTGGGTATAAGTTCCCTATTGCTGGCTATACACAGAAGAAGAAAGACTTCACCTACAACAGCGTGTTCTCATCTGAGTTCAGCAGCAAGAACCAACTCGTTGTTAATCAGATGATTAGGCGTGAGGTGTTCTTCAACAGGCTATGGTACGCCACCTTCAACCACAATGCAGGGCGGTTCAACGCTTTCAAGGCGGGGGATAGCATTGACCTAGACAGACAGTACGGGGCTATCACAGGTATAGTACCTAGCATGGACAGGCTTGTTGTCTTACAAGAACGTGCTATGTGTGTGCTTAACCCATCACAACCAACGGTATTAGCTGATGCAGCACAAGAACAACGACCGGTATATATAGGCTCAGGGAGGCTCTTCGCTTCAGGTATACGTTACACCACCACTGACTCGGGCATGGCTAAGGGCGACCGTGCATACCCATTCCTTGAGAAGGTCTACTGGGTTGACAGGGATAACCAACGTATCATGCGGTTCAATCAGGAAGAGACAGCAGATATAAGTACCATACATGGTGTACGATCATGGGTTAAGGACATACTCACTGTACAGCCTCAGGCACCATACCGTATGCATGAGCTAGAGGATGGTAATAGGAGGCTGGCTTTCAATCATTCCCGTGAGCTATGGGGCACCTTCAAGTTCAGGCCATGGGTACAACGTAACTGTATGGAGATCAATGAGTCACGTGATGCGTTCATGTCATTCATCACCATTGGCGCACCGATAGTATCTAATATATCAGGTAAGAACATGTACCTCTACAATGCACATTTCATCACTGATGATTCAGAGCCTGATGGACGTAATGACAGGGAGTACACTAACAGGGTCTTCAGTGATGGGCGTTATGATGCGTACTACTACTACGAGGATAGAGACGTAGACCCATCAGTAGGTATGTTCATCAACCCTATGGGGGATATCAAGACAGACAAGGAGTTCAACGGTATCAGCGTGCCTATCGTGGGTACAGGCGAGAAGAGGCTCGTGTTTGATATGGAGATGAAGCTCATGCCTGAGGATGCAGGAGGGTTATTAACTGTCAGACGATGCATGCAGACATTCATGTACCCATACACCACCAAGGATAATAAGGGTGAGAAGATGACTGATGATGCTATAGTTAGCTTGGTTGAGAACCAGGTACCTAAGGTTATCTCTGATGCTATCATGCATCCTAAGACCGGTGCAGCAATAGACGGGTTCACCAGTAAGGTGCTTAAGCAGGTTAAGAAGACCGACATGGTCAATCAGCATGGTCGTCAGCTAGGCACAGCAGTACCTTTTGGTTACTATGTGTACGTACCACTTAACAAGGTTGATCAACAGTCTGAGGTGTATCGTATGATGAAACCATTCATTGGTAACACGCCGGTAGATGCGTTCTACACAGTCAATATACCTATCCGGGGGTTTGGTTTTCATCTAAACATGCGTATGCATGACTTTAGTGAGAGCAGCACTAACATGCTTGGACAGAAGTTCGATACTAAGGTGTTTAGGGTCCCAACCAACCTAGGTGTACGTACGCGTATAGAAGCGTATTTCAACGATATCAGTGTAGCCTACGCAGCACTTATTGAGCATGAGACAGAGACAGGAGGGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)