Protein
View in Explore- Genbank accession
- WFG41375.1 [GenBank]
- Protein name
- baseplate tail tube protein
- RBP type
-
TSP
- Protein sequence
-
MYYSLMRESKVIVEYDGRAFHFDALSNYDVQTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAVNFSNTLTEANFFEWLGFDRKGNTFLLPLYSSNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEVMSYSPVIASTNGSILPGLLSASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPSARITKRLDFSDVYRVEWDIIPTASSDPVRIDFFGEIKND
- Physico‐chemical
properties -
protein length: 300 AA molecular weight: 34446,27710 Da isoelectric point: 4,91580 aromaticity: 0,13333 hydropathy: -0,25300
Domains
Domains [InterPro]
IPR056389
ATT
1–298
ATT
1–298
1
300
Architecture
ATT 1-298 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
300
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 12 | 12 | 0,9142 |
| Central domain | 13 | 239 | 228 | 0,0416 |
| C-terminal | 240 | 300 | 60 | 0,4377 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-12
1-12
Central
13-239
13-239
C-terminal
240-300
240-300
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Salmonella phage MET_P1_179_112 [NCBI] |
3032423 | Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus tv179112 |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WFG41375.1
[NCBI]
Genbank nucleotide accession
OQ383622
[NCBI]
CDS location
range 8870 -> 9772
strand +
strand +
CDS
ATGTACTACTCTCTAATGCGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATGTACAAACCTCCTACGAAGAGTTTAAGACCCTTCGTAGGACTATTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACTCCTTCTTCTATCTCTCTAGCAGTAAATTTTAGTAATACGCTTACTGAAGCTAACTTCTTTGAATGGTTAGGTTTTGATAGAAAAGGTAATACTTTCCTACTTCCACTATATAGTAGCAATATTGAACCTATTATGTTTAATATCTATATAGTAAATAAGGATAATAACTGTGTATATTTTGAGAACTGCTATGTATCTACAGTAGATTTTTCTTTAGATAAAAATATACCAATTCTTAATGTCGGTATTGAATCGGGAAAATTTTCCGAAGTATCTACGTATAGGGAAGCAGCTTCTATTATACAGGGTGAAGTAATGTCTTACAGCCCAGTAATAGCTTCTACTAATGGTAGCATCTTACCCGGTCTTCTTTCTGCCTCTTTATCTTTCCAACAGCAGTGCTCCTGGAGAGAAGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCCTATGTAAATGAAATGAATGCTTCGGCAACCATTTCTCTATATTACTTAAAACGTTTTGCAGGAGATATGGTTTACAATATCGAACCGGAGACAGATGTACCTTTAAATATAAGAAATAATAATATTTCTATAGATTTTCCTTCAGCACGTATTACAAAACGCCTAGATTTCTCAGATGTGTATAGAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCAGTGAGAATAGATTTCTTTGGAGAAATTAAAAATGATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
624311835b108ad8bea8e23859bf60257c1aefa7dcebc12bedc7cf85723711ac
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50